Salmo trutta (river trout): 115201560 Help Entry 115201560         CDS       T08542                                  Name (RefSeq) cysteine protease ATG4D-like   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism stru  Salmo trutta (river trout) Pathway stru04136   Autophagy - other stru04140   Autophagy - animal stru04145   Phagocytosis Brite KEGG Orthology (KO) [BR:stru00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     115201560    04140 Autophagy - animal     115201560    04136 Autophagy - other     115201560  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:stru01002]     115201560   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:stru04131]     115201560    03029 Mitochondrial biogenesis [BR:stru03029]     115201560 Peptidases and inhibitors [BR:stru01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    115201560 Membrane trafficking [BR:stru04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     115201560 Mitochondrial biogenesis [BR:stru03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     115201560 SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 Motif Other DBs NCBI-GeneID:  115201560 NCBI-ProteinID:  XP_029621168 LinkDB All DBs Position 1:55856530..55865631 Genome browser AA seq 480 aa AA seqDB search MAIRKRPPDSWSSPVVMNPSSPCEGQNPEGDPPDDWFHLSTMSLGTQGSDGSRDDPEEPE EKGRLKSKLVSAWNNVKYGWSFKSKARFSKTSPLTMLGQSYLLSHGVERECFRRAFATLL WLTYRRGFPQLDGSSLTTDSGWGCMLRSGQMLLAQGLLLHLLPPGWTWLSANHVSKDDME VQESRSLGLEVTNKGQRKSIVSFLESWTEVTHRRVVSWFGDHPIAPFGLHQLVEQGTSSG KKAGDWYGPSIVAHILRKAVDAASSEVSNLTVYVAQDCAVYIDDVVRLCERPLSEGSTGP SPAWKSVIILVPVRLGGEVLNPTYIKCVKNLLRLECCIGIIGGKPKHSLFFVGYQDEQLL YLDPHYSQSTVDITQDNFPLESFHCKCPRKISFSRMDPSCTIGFYAKSQKEFELLCSAVS TALSSSTERYPIFTIAEGQGQDGGQEDESDAPPNSVTHILTKDKARLRRTNNSMDEFVLL NT seq 1443 nt NT seq  +upstreamnt  +downstreamnt atggcgataaggaaacgacctccagacagttggtcaagcccagtagtcatgaaccccagt tctccctgtgagggccagaaccctgagggtgaccctccagacgattggttccacctttcc accatgtctctgggaactcagggctctgatgggagccgggatgacccagaggaacctgag gagaaaggcagactcaagtccaagttggtgtcagcatggaacaacgtcaaatatggctgg tcgttcaagtcaaaggcccgcttcagcaagacctctcctctgaccatgcttggacagtct tatctgctcagtcatggagtggagagggagtgctttcgccgggcctttgccactctgctg tggctgacgtacaggcggggcttcccacagctggatggttcctctctgaccacagacagt gggtggggctgcatgctgcgcagtggacagatgctgctagcacaggggctgctgctacac ctgctgccaccaggctggacctggctctctgccaaccatgtttccaaagatgacatggag gtacaggagtctcgctccttgggtctagaggtgactaataagggacagaggaagagcata gtgtccttcctggagagctggactgaggtcactcacagacgggtggtgtcctggtttggg gaccatcccatcgccccgttcgggctgcatcagctggtggaacaaggcacaagctcaggg aagaaggcaggggactggtacggcccctccatcgtagcacacatacttcgtaaggctgtt gatgcagcatcatcagaggtgtccaatctgacagtgtatgtagcacaggactgcgctgtg tacatagatgacgtggtgaggctgtgtgagagacctctatctgagggctccacaggaccc agtccagcctggaagtctgtcatcatcctggtccctgtgcgcctgggaggagaagtcctc aaccccacctacatcaaatgtgtcaaaaatctcctgaggttagaatgctgcattggaatc attggtggcaaacccaagcattctctgttcttcgttgggtaccaagacgaacagctgttg tacttggacccccactacagccagtccacagtggatatcacacaggataacttcccctta gagtcgtttcactgtaagtgtcccaggaagatctccttcagtcgcatggatcccagctgc actataggcttctatgccaagagccagaaggaatttgagttactgtgctcagctgttagc acggctctctcatcatcaacagaaaggtaccccatcttcaccattgcagagggtcaggga caggatggggggcaggaggatgagagcgatgcacccccaaactctgtcacccacatcctg accaaggacaaggcgaggctgagaaggaccaataacagcatggatgagtttgtgttattg tga

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