Salmo trutta (river trout): 115201754
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Entry
115201754 CDS
T08542
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04141
Protein processing in endoplasmic reticulum
stru04210
Apoptosis
stru04217
Necroptosis
stru04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115201754
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115201754
04217 Necroptosis
115201754
04218 Cellular senescence
115201754
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115201754
Enzymes [BR:
stru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
115201754
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C2: calpain family
115201754
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
ESX-1_EspG
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
115201754
NCBI-ProteinID:
XP_029621498
Ensembl:
ENSSTUG00000030885
UniProt:
A0A674BGA7
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All DBs
Position
10:complement(44275455..44330775)
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AA seq
702 aa
AA seq
DB search
MSGGISASIATSRLRAEGMGSNDHAVPFLNQNYEALRQECLETGCLFQDPSFLAEPPSLG
FKELAPYSAKTRDVEWMRPTELTDDPQFILGGATRTDICQGALGDCWLLAAIASLTLNER
LLHRVVPHGQSFQEDYAGIFHFQFWQFGEWVDVVIDDRLPTKDGELMFVHSAEGNEFWSA
LLEKAYSKLNGSYEALSGGSTTEGFEDFTGGVSEMYDLRKAPRDLYRIIGKALDRGSLLG
CSIDITSAFDMESVTFKKLVKGHAYSVTGLKQVDYQGQVERLIRVRNPWGQVEWTGAWSD
NSSEWDELDPTEKEDLHLQMEDGEFWMSFQEFLRQFSRLEICNLTADALSEDGLSHWNTI
KFHGMWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDDEVACSFLVALMQKDRRRY
RGQGQDMHTIGFAIYEIPEEYRGCQNVHLKKDFFLNHSSCARSETFINLREVSNRLRLPP
GEYLIVPSTFESGKEADFVLRVFTEKQSETEELDDMISADLEDEDLISEDDVDDSFKSMF
AQLAGEDMEISVRELRTILNRVVTRHKDLKTDGFSMESCRTMVNLMDKDGSAHLGLIEFQ
LLWNKIRKWLVIYREYDMDKSGSMSSYEMRLAVESAGFKLNNRLNQVLVARYAENEAIDF
DNFICCLVKLEAMFRSFQQLDKEGEGVAEMNITEWLYMTMCG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggggatctctgctagcatagccaccagcaggctacgagctgagggaatgggc
tccaacgaccatgccgtacccttccttaaccagaactatgaggctctgaggcaggagtgt
ctggagacaggctgtttgttccaggatccctccttcctagccgagcctccctctctgggc
ttcaaggaactggccccctactccgccaagaccagggacgtggaatggatgagacccacg
gagctgacagatgaccctcagttcatcctgggaggagctaccagaacagacatctgccag
ggagcgctaggtgattgctggctcctagcagccatagcctctctaaccctcaatgagagg
ctgctccaccgagtggtccctcatggtcagtccttccaagaggactacgctgggatcttc
cactttcagttctggcagtttggtgagtgggtggacgtggtgattgatgaccggctgcca
acgaaggatggagagctcatgttcgtccactcagccgagggcaatgagttctggagcgcc
ctgctggagaaggcctactccaagctgaatggttcctacgaggctctgtctggaggcagt
accacagaaggttttgaggacttcaccggtggtgtctctgagatgtacgatctccggaag
gctccacgggacctgtacaggatcatcggcaaagccctggacagaggctcattgctgggc
tgctccatcgacataaccagtgcctttgacatggagtctgtcacgtttaagaagctggtg
aaaggacatgcttactcagtcactggcctcaagcaggtggactaccagggtcaggtggag
aggctgatcagggtgaggaacccctggggacaggtggagtggaccggggcctggagcgac
aattcttcagagtgggatgagttggatccaactgagaaagaggacctgcatctacagatg
gaggatggagagttctggatgtcgttccaggagttcctgaggcagttttcccgtctggag
atctgtaacctgacggcggacgctctgagtgaggacggcctcagccactggaacaccatc
aagttccacggcatgtggagacgggggagtaccgccgggggctgccgcaaccaccccaac
acgttctggatcaacccccagtataagatcactctgctggaggaggatgacgaccctgag
gatgatgaggtggcctgtagcttcctggtggctctgatgcagaaggacaggaggaggtac
cggggacagggacaggacatgcacaccatcgggttcgccatctacgagattccagaagag
tacaggggctgtcagaacgtgcacctaaagaaagactttttccttaaccactcatcctgc
gctcgctctgagaccttcatcaacctgagagaggtcagcaaccgtctccgtctgcctcca
ggagaatatctcatcgtcccctccaccttcgagtctggcaaggaggccgactttgtcctc
cgagtcttcactgagaaacagtccgagacagaagagctagatgatatgatatctgcagac
ttggaagatgaggacctcatcagtgaagatgacgtcgacgactctttcaaatccatgttc
gctcagcttgcaggagaggacatggagatatctgttcgtgaactcaggaccatcctgaac
agggtggtgactagacacaaagacctgaagacagacggtttcagtatggagtcctgtagg
accatggtcaacctcatggataaagatggcagtgcccatctaggcctgatagagttccag
ctcctctggaataagatcaggaagtggctggtcatctatagagaatatgacatggacaag
tcagggtccatgagctcctatgagatgcgacttgctgtggagtctgcaggttttaaactg
aacaacagactgaatcaggtcctagtggctcgctatgctgagaacgaggccatagacttt
gacaacttcatctgctgtctggtcaaactggaagccatgtttagatctttccagcagcta
gacaaagagggagaaggtgtggctgagatgaacatcactgagtggctttatatgaccatg
tgtggttaa
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