Salmo trutta (river trout): 115201998
Help
Entry
115201998 CDS
T08542
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115201998
Membrane trafficking [BR:
stru04131
]
Endosome - Lysosome transport
Others
Others
115201998
Endosome - Golgi transport
115201998
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
115201998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
DUF1088
NBCH_WD40
Beach
Neurobeachin
WD40
Laminin_G_3
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
PH_BEACH
WDR55
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Motif
Other DBs
NCBI-GeneID:
115201998
NCBI-ProteinID:
XP_029621718
Ensembl:
ENSSTUG00000001959
LinkDB
All DBs
Position
11:12258279..12531442
Genome browser
AA seq
2786 aa
AA seq
DB search
MASEETPGAGRPAGQGDGAAAVSLNPGIPIRGIKMKFAVLAGLVEVGEVSNRDIVETVFN
LLVGGQFDLEMNFIIQEQDSIVCMVELLDKCEPTCQAEVWSIFTAILKKSVRNLQACTDT
ALINLVLDRVAHTDSMIADLMVDMLGVLASYSITVKELKLFFSKLQGEKGQWPPHAVKLL
SVLRSMAHRNGPDSFFSFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMDPINNINVDKDK
PYLYCFRTNKGLGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTIVHVYNRW
KNSEISCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQMGAVYLFGEAL
SAAQILAIYQLGPGYKGTFKYKAESDLLFAEHHKILLYDGKLSSCISFSYNPRATDAQLC
LESSPKDNASIFVHSPHALMLQDVKAVVTHSVQSAIHSIGGVQVLFPLFAQLDHLQHTSD
ELDTSVCCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRSVLDIVLAF
ARYLSNLQNGVLLLKQLCDHILFNPAIWIHAPAKVQLALYTYLSTEFISTVTIYNAIRRV
GTVLQVMHTLKYYYWVVNPQDRSGVTPKGLDGPRPNQKEIHSLRAFLLLFVKQLIMKDYG
VKEDELQSILNYLLTMHEDDNLMDVLQLLVALMSEHHGSMVQAFDQRNGVRAIYKLLASN
SEGIRVQALKVLGYFLKHLPAKRKSEVMLGHGLFSLLNERLMLHSNQFSMTTYNVLFEIL
TEQICTQVIHKQHPDPDSNVKIVNPQVLKVIAALLKNSPLSPESMEVRRVFLSDMIKLFN
NSKDNRRSLLQCSVWQDWMLSLCFINPKSSEEQKVTEMVYAIFRILLYHAIKYEWGGWRV
WVDTLSITHSKVTFEQHKENLARMFRQYQRLGSEADAAGIRTISGASRDSEIQGQLRTNR
DQGEETAPSTVIELTIDPEGVPQNQESPNTTPPSATSTASASTPSPPEREGDRSQRGQAP
ITVSNMLARAEEEEKEELQQVQNQISEDQRGGAGDRAEATTQETEAKLTEDKVISKTVEA
MVETETATDKTDDAAAASTAETDEATKPETDDAKVAKTETSDDAKTSDTDGEKGSETHSY
KAANVLMSEDSLKEPKELAKQPEEQVSAAISACQKGSVAEGSTVGASVQSVSDQVRPSST
DDSMEESSFVSATGGEEGKTEEGKTEEGKTEEGKTEEGKTEEGKTEEGKTEEGKTEVVVQ
EENMEEVKAAEIKTEEVKTEKKKEEESVAEVTKSAVESQETPPDSVPEESQTQPPKMEEI
DLDLSAPGTDPTSTEPAQQPLEFTTSPPTALEAILPTPAAVGATVSKSDTPQAVAPAEAP
STKAVQPEAPQASGATEAPSTRTDTSPKVASATAVEAGKDSAAEGPGSATKTKEIHIARL
DVSSVASDTERLELKETSTPEVPQGDAAAAGASGGQARESSSSARSTMFRIPEFRWSHMH
QRLLTDLLFSIETDVQMWRSHSTKTVMDFVNSSENVVFVHNTVHLISQVVDNLIMACGGI
LPLLSAATSSSHDLENIEPSQGLSVEASVTFLQRLINLVDVLIFASSLNFTEIEAEKNMS
SGGILRQSLRLVCAMAVRNCLECQQHSHFKPSQDSARGQQAVQSLMGAAKSMPAQSPVDV
VTGGMSPIRDMDRLLQEMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDIL
EPQNDKKPPQRSQSARSADSNAVSGGPDLESSVSLRRRDSGIGDDHSSVAPSEADSTAQG
PDAVSEALSTLSSEVRGHRDNPTADARSGKNVKDILRSLVSAPADDIMVDPSLLPPAFLG
AAMGNNPNQFRSFDRSVRVAPKKVGGAPSPGSSTPVPSATAAVAAAGTPVNNVAVVSTGD
ASQSTTAETTAGESQTLRGSASANLPSVPTLSPMTRDTAPSMSISERLEHALEKAAPLLR
EIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGL
AFIELVNEGRLLSHTMKDHLVRVANEAEFILSRQRAEDIHKHAEFESHCAQYSAEKRDEE
KMCDHLIRAAKYRDHVTATQLIQKIVNILTDKHGAWGSSAFSRPREFWRLDYWEDDLRRR
RRFVRNPFGSTHSKATLKAAAEHAPEEDVLKGKQSIRSQALGNQNSESEILLDGDDDTLS
SLEEKELENLTGPVNMSTSAQLVAPAVVVKGTLSITASELYFEVDEEEASFKTIDPKPPG
FQPPGFQPPGFQPPGFQPPGSSPLLQPPGSQIVFCAQSPLTMAPPLLLSSQALESEFVSC
QLHQWIDLIFGYKQQGPEATRSLNVFYYLTYEGTINLSSITDPMLREAVEAQIRSFGQTP
CQLLIEPHPPRSSAMQVSPLMFTEQMQQDVIMVLKFPSNSPVAHVAANTQPGLAAPAIIT
VTANRLFAVNKWHGLAGHQGSSVQDQQYQLPVEIDPLIASNVGTHRRQITDLLDQSIHIH
SQCFIITADNRFILLCGFWDKSFRVYSTDSGKLTQIVFGHRDVVTCLARSESYIGGDCYV
LSGSRDATLLLWYWNGKHSSIGENPGTEFVTPRAILTGHDCEVTCASVCAELGLVISGCR
EGPCLIHSMNGDLLRTLEGPVGCMQPRLIQSSTEGHAVVYYDKGHFCFFSINGKLLGHME
VEENIRAMLLSRDGQYLLTGGDGGVLSVWQVHNLKQMFTYPGCDAGIRSMAMSNDQRCII
TGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8361 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaggagacgcctggtgctgggcgaccagccgggcaaggtgatggagctgcg
gcggtgtcgctcaaccctggcatcccaatccgaggaatcaaaatgaaattcgctgtcctc
gccggtctggtggaagttggggaagtttccaaccgggacattgtggagaccgtcttcaac
ctgttggtggggggccagtttgacctggagatgaacttcattatccaggagcaggacagc
attgtgtgcatggtggagctgctggacaagtgtgagcccacgtgccaggcggaggtgtgg
agcatcttcacggctatcctgaagaagagcgtgaggaacctgcaggcctgcaccgacacg
gccctcatcaacctggtcctggaccgcgtggcccacactgacagcatgatcgcagacctg
atggtggacatgctaggagtgctggccagctacagcatcacagtcaaggagctgaagttg
ttcttcagcaaactgcaaggagagaaaggccaatggcctccccatgcggtgaagctgctg
tctgttctgaggagcatggcccaccggaacggacctgactctttcttcagcttcccaggg
aagagtgctgctgctatagctctgccccctatagccaaatggccgtaccagaatggattc
accttccacacgtggcttcgcatggatccaatcaacaacatcaatgttgacaaggacaag
ccttacctgtactgttttcgcaccaacaaaggtctgggatactctgcacactttgtgggc
ggctgtttgattgtgacctcgttaaagtccaaggggaagggattccagcactgtgtgaaa
tatgacttcaaaccacagaagtggtacatggtgaccatcgttcacgtctacaaccgctgg
aagaacagtgagatcagctgctacgtcaatggagagctcgcctcctacggagaaatcacc
tggttcgtcaacaccagcgacactttcgacaagtgtttcctgggttcgtcagagacggcg
gacgccaaccgtgtgttctgtggtcagatgggggcggtgtatctgtttggcgaggccctc
agtgcagcccagatcctggccatctaccagctggggcctggttacaagggcacgttcaag
tacaaggctgagagtgacctcctgtttgctgagcaccacaagatcctactgtacgatggc
aagctgtcctcctgcatctccttctcctacaacccacgcgccaccgacgctcagctgtgc
ctggagtcctcccccaaggacaacgcctccatcttcgtccactcgccacacgctctcatg
ctgcaggatgtgaaggctgtggtgacccactccgtccagagtgccatccactccattggg
ggagtgcaggtcctcttccccctgtttgcacagctggatcacctccagcacaccagcgac
gaactggacacctctgtctgttgcactttgctgtcctttgtgatggagctgctgaagaac
tctgtggctatgcaagagcaggtcctggcctgcaagggcttcctggtcatcggttacact
ctggagaagtcttccaaggtgcatgtgactcggtccgtgctggacatcgtgctggccttc
gcccgttacctcagcaacctgcagaacggcgtcctgctgcttaagcagctgtgtgaccac
atcctgttcaaccctgccatctggatccatgcccctgccaaggtgcagttggcgttgtac
acctacctgtcgacggagttcatcagcacggtgaccatctacaacgccatccgcagggtg
ggcacggtactgcaggtcatgcacacgctcaagtactactactgggtcgtcaacccccag
gaccgcagcggagtcacgcccaagggcctcgacggtccgagacccaatcagaaggagatc
cactctctcagagcttttctgctgctgtttgtgaaacaactcataatgaaggattacgga
gtgaaggaagatgagcttcagagtattctcaactacctgctcaccatgcatgaggacgac
aatctaatggatgtgcttcagctgctggtggctctgatgtcagagcatcacggctccatg
gtgcaggcctttgatcagcgcaacggagtacgggccatttacaagctgctggcttccaac
agtgaaggaatcagagttcaggcactcaaagtcttgggctacttcctcaaacacttgccc
gctaagaggaagtcagaggtcatgctgggtcacggcctcttctccctgctcaacgagcga
ctgatgctccactccaaccagttcagcatgacaacctacaacgtgctcttcgagatcctg
accgagcagatctgcactcaagtgatccataaacagcatccggaccccgactccaatgtg
aagattgtcaacccgcaggtcctgaaggtgatcgctgccctgctgaagaactctcccctc
tccccagagagcatggaggtgcgcagggtcttcctgtcagacatgatcaaactgttcaat
aacagcaaagataacaggaggagcctgctgcagtgctcggtgtggcaggattggatgctc
tctctgtgcttcatcaaccccaagagcagcgaggagcagaaggtcactgagatggtgtac
gccatcttccgcatcctgctctaccacgccatcaagtacgagtggggcggctggcgcgtg
tgggtggacaccctgtccatcacccactccaaggtgacctttgagcagcacaaggagaac
ctggcccgtatgttccgtcagtaccagagactgggctccgaggccgatgcggctggtatc
cggaccatttccggggccagccgagactctgagattcagggccagctccggaccaacagg
gatcagggggaggagactgccccctccaccgtgatcgagctcaccattgacccagagggg
gtcccccagaaccaggagtcccccaacactactcctccctcagcgacctcaacagcatct
gcctccacccccagccctccagagagagaaggagatagaagtcagaggggtcaagcaccc
ataactgtgtccaacatgctggccagagctgaagaagaggaaaaggaggaactacagcag
gtccagaatcagatctctgaggatcagagaggaggtgctggtgacagagctgaagctact
acacaggagactgaagctaaacttactgaggataaagtcatcagtaagaccgttgaggcc
atggttgagactgagaccgccacagacaagactgatgatgctgcagcagctagcacagct
gaaacagacgaagcgaccaagccagaaactgatgacgcgaaggtggctaaaacagaaaca
agcgacgatgctaaaacatctgatacggatggagagaaggggtcagaaacgcacagctac
aaagccgccaacgttcttatgtctgaagattccctgaaagaacccaaggaactggcaaag
caaccggaggaacaggtctctgctgcgatctcggcctgccagaagggcagcgtggcggag
gggtcaacagtcggggcatctgtccagtcagtcagtgaccaggtccgacccagctccacc
gacgacagcatggaggaatcctcttttgtctccgccactggtggagaggaggggaagaca
gaggaggggaagacagaggaggggaagacagaggaggggaagacagaggaggggaagaca
gaggaggggaagacagaggaggggaagacagaggaggggaagacagaggttgtagttcag
gaggagaatatggaagaggttaaagcagcggagatcaagacagaggaggttaaaactgaa
aagaagaaggaagaggagagtgttgctgaggtcacaaaatcagcagtggaaagtcaagag
acaccacctgattctgtacctgaggagagtcagacacaaccccctaaaatggaggagatt
gaccttgacctgtctgcaccaggcaccgaccccaccagcacagagccagcacagcagcct
ttagagttcacaacgtcgccccctacagccctggaggctatactaccaacaccagcagca
gtaggggccactgtctctaaatctgacaccccacaggctgtagcaccagcagaggccccc
agcaccaaggcggtccagccagaagccccacaggcctcaggggccacagaggcccccagc
accaggactgatacctctccgaaggtagcctctgctactgctgtggaggcagggaaagac
agtgcagcagagggccctggctctgccaccaagaccaaagagatccacattgccaggctg
gatgtgtccagtgtggcctcagacacagagagactggagctaaaggagacctcaacacct
gaagttcctcagggcgacgctgctgcagccggtgcctcaggaggccaggccagagagagc
agctcctccgctcgctccaccatgttccgtattccagagttccgttggtctcacatgcac
cagcgcctgctcacagacctgctcttctccatcgagactgacgtgcagatgtggaggagt
cactccactaagacggtgatggactttgtgaacagcagtgagaatgtggtgtttgtccac
aacacagtgcacctcatctctcaggtggtggacaacctcatcatggcctgtggaggcatc
ctgcccctgctttccgctgccacatcctcctcacatgatctggagaacattgagccgtcc
cagggtctgtcggtggaggcgtctgtcaccttcctgcagcgcctcatcaacctggtggat
gttctgatcttcgcctcctccctcaacttcaccgagatcgaggctgagaagaacatgtcc
tctgggggtatcctcagacagagccttcgcctggtgtgtgccatggctgtgaggaactgt
ctggaatgtcagcagcactctcacttcaagcccagccaggacagcgcccgtggccagcaa
gccgtgcaaagcctcatgggagccgccaagtccatgcccgcgcagagccctgttgatgtt
gtgacaggagggatgtctcccatcagagacatggaccgtcttctacaggaaatggacatc
aaccgcctcagagccgtggtcttcagagatatcgaggacagtaagcaggctcagttcttg
gccctggccgtggtttacttcatctctgttctcatggtgtccaagtaccgagacatcctg
gagccccaaaacgacaagaaacccccccagcgcagccagtctgccaggagcgcagacagt
aatgccgtctctggcggtcccgacctggagagcagtgtgtccctccgtcgccgagactct
ggcatcggggatgaccatagctccgtggcccccagcgaggcagactccaccgcccagggg
cccgacgccgtgtccgaggccctgtccaccctctcctcagaggtcaggggtcacagagac
aaccccacggcggacgccaggagcgggaagaacgtgaaggacatcctgcgcagcctggtc
tcggcgcctgctgatgacatcatggtggaccccagccttctgccgccggccttcctggga
gctgctatgggaaacaaccccaaccagttcagatcctttgacaggagcgttcgggtggcg
cccaagaaggtgggcggggctccgtccccaggctcctccactcctgtcccatcagccacc
gctgctgtggcggccgccgggacaccagtcaacaacgttgccgtggtttccacgggcgac
gcctcccagagcaccaccgctgagactacagccggtgagtcccagacattaagaggatca
gccagtgccaacctgccatctgtccccacgctgtccccaatgacccgggacacagccccc
agtatgagtatctcagagaggctggagcatgctctggagaaggctgcccccctactgaga
gagatctttgtggactttgcccccttcctctctcgcaccctgctgggtagtcacggacag
gagctcctcatcgagggcaccagtctggtgtgtatgaagtccagcagttcggtggtagag
ctggtcatgctgctctgttctcaggagtggcagaactctatccagaagaacgcaggcttg
gccttcatcgagctggtcaatgagggcaggctactgagccacaccatgaaggaccacctg
gtgcgggtggccaatgaggctgagttcatcctgagccgacagagagccgaggacatccac
aaacacgctgagtttgagtcccactgtgcccagtactcggctgagaagcgggatgaggag
aagatgtgcgaccacctgatccgagcggccaagtaccgcgaccacgtgaccgccacccag
ctcatccagaagatagtcaacatcctgacggacaaacacggtgcctggggaagctctgcc
ttcagccgtcctcgggagttctggcgcctcgactactgggaggacgacctgaggcggcgc
cggcgcttcgtcaggaaccccttcggatccactcactcaaaggccacgctcaaagctgca
gccgaacacgctccggaggaagatgtcctcaaaggcaaacagtccatcagaagtcaggcg
ctgggaaatcagaactctgagagtgagatattattggatggcgacgatgacactctatca
tccttggaggagaaggaattggagaacctaacgggccctgtaaacatgagcactagcgct
cagctggtcgccccagcggtggtggtgaaaggaacgctgtccatcaccgcgtctgaactc
tacttcgaggtggatgaagaagaggccagctttaagacgatcgatccaaagccccctggt
ttccagccccctggtttccagccccctggtttccagcctcctggtttccagccccctggt
tccagccccctgcttcagccccctggttcccagattgtgttctgtgcccaatcccctcta
accatggctcctcctctcctcctgtcttcccaggctctggagagtgagtttgtgtcgtgc
cagctgcaccagtggatcgacctgatctttggctacaagcagcagggtcctgaggccacc
aggtctctcaacgtcttctactacctgacctatgaagggaccatcaacctcagctctatc
accgaccctatgctcagagaggctgtggaggcacagatcaggagttttggacagacccca
tgtcagctgctcatcgagccacacccaccaaggagctccgccatgcaggtgagcccgttg
atgttcacggagcagatgcagcaggatgtcatcatggtgttgaagttccccagcaactct
cccgtggcccacgtggccgccaacacccagccgggcctcgccgcgcccgccatcatcacc
gtcaccgccaaccgcctcttcgccgtcaacaagtggcacggcctggccggtcatcaaggc
tcctctgtgcaggaccagcagtaccaactgcccgtggaaatcgaccctctgatagccagt
aacgtggggacccaccgtcgtcagataacagacctgttggaccagagcattcacatccac
tctcagtgtttcatcatcaccgcagacaaccgcttcatcctgctctgtggcttctgggac
aagagcttccgcgtctattccactgactcagggaagctgacccagatagtgtttgggcac
cgtgacgtggtgacgtgtctggccaggtctgagtcgtacatcggaggggactgctacgtc
ctatcaggctccagagacgccacgttactgctctggtactggaacggaaaacacagcagc
atcggagagaacccaggaactgagtttgtgacgcccagagccatcctgacgggtcatgac
tgtgaggtgacctgcgccagtgtgtgtgccgagctgggattggtcatcagtggctgcaga
gagggcccgtgtctgatccattccatgaatggggacctgctgcggaccctggagggcccg
gtgggctgcatgcagccccgtctcatccagtcctctacagagggccacgctgtagtctac
tacgacaagggacacttctgcttcttctccatcaacggaaagctgctggggcacatggag
gtggaggagaacatcagggccatgctgctgagtcgggacggacagtacctgctgacgggg
ggagacgggggagttctgtctgtctggcaggttcacaacctcaaacagatgttcacctac
cctggctgtgacgcaggcatccgctccatggccatgtccaacgaccaaaggtgcatcata
accggcatggcgtctggtagtatagtcctgttctacaatgacttcaacaggtggcaccac
gagtaccagaccagatactga
DBGET
integrated database retrieval system
