Salmo trutta (river trout): 115202097 Help Entry 115202097         CDS       T08542                                  Name (RefSeq) protein PAT1 homolog 1-like   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism stru  Salmo trutta (river trout) Pathway stru03018   RNA degradation Brite KEGG Orthology (KO) [BR:stru00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     115202097  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:stru03019]     115202097 Messenger RNA biogenesis [BR:stru03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      115202097   mRNA degradation factors    5'-3' decay     Decapping complex      115202097 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 HTH_AraC Motif Other DBs NCBI-GeneID:  115202097 NCBI-ProteinID:  XP_029621840 UniProt:  A0A674ECB0 LinkDB All DBs Position 11:complement(3735276..3760708) Genome browser AA seq 811 aa AA seqDB search MFRFQSLDEDCTLEKEEGLVEEEDEIDQFNDDTFGDGAIDDDWQEEHKRLAELEEQKNDG LGGLGLGALGMGGMGGGNASAVHLPPPASRVPHPSSLPPPHHSLSSMPPPGLEERGGGDL AESLAMLILGADPAIASVGGPAGPGDRSTGLPPPPSIPQQHHHPSQLPPHHQLTTSGLPP GPPHPSLLSYQQHQHLLRRGAAPMQQMNSHNIWENNMGFGPVSITPGLITQMEDSPLMSI IKEVGLPNRPPPMMSEDGRDLSERAPPPRSSSPVIGSPPVRAVPIGTPPKQPMSHALNHQ QQIHHPTAVHVRAPVHHQHRYPPSFPERISPNTLLNIANSPLCRPPFPAGVGPVLSQIQR AQMLNSQVAGFPRGCQGPPLLPGGGGFRPFFGQPPPHRMGPHPGGPPPNHVPCPIIRHNT THLHPQHRRMLTQRMQSRGGERGGRVGDWRSRDPYSNLMTQREKEWVAKIQMMQLQSTDP YLDDYYYQNYFEKMEKRQERDRDGVRKEHTTKLITPQVARLEHTYRPVQFAGSLGKLTVS SVNNPRKMIDTVVTSRTDDEEKREKQVWNKRRQILYTVEKMYSLLLEVQDFEKRFMQTPE EQREALLEQHKTHTLQLYSSLKEKEWDDRVSDEQCLLIMSVRKGKRLISRLIPFLPPLQA ATVVMGIARNLPALAKKDKQDQVLCWLVEPIAVVISSLSSASLTDLLQELQGSEGQLSRV LQNKFGVTLLYLILSEGERMQSSNPTCQLMDDNRWTELVFSVTRELLIVPSSSLSPPLFT PPNLLSLFSRYVDRQRLELLQEKLQISALSR NT seq 2436 nt NT seq  +upstreamnt  +downstreamnt atgttccgttttcagtcccttgatgaagattgtaccctggagaaggaggaggggctggta gaagaagaagatgagattgaccagtttaatgacgacacctttggagatggggccatcgac gatgactggcaggaggagcacaagcggctagccgagctcgaagaacaaaagaacgacgga ctcggaggtttaggactaggggcactagggatggggggaatgggaggaggaaacgcctcc gctgttcaccttcctcctcccgccagccgcgtcccccacccgtcttccctccccccacca catcactccctctcttcgatgccccctccgggcctggaggagagggggggaggcgaccta gccgagtccctagccatgttgattctcggggcggacccggccatcgccagtgtgggtggt ccagccgggcctggtgaccggtccactggtctccctcctcccccttccatcccccagcag caccaccacccctcccagctccctccacaccaccagctgaccacgtcggggctacccccc ggcccaccgcacccctccctgcttagctaccagcagcatcagcacctcctacgccgaggg gcagcccccatgcaacagatgaactcacacaatatctgggagaacaacatgggatttggg cctgtgagcatcacccctggactaatcactcaaatggaggacagtccacttatgtctatc atcaaagaagtggggctgcccaatcggcccccgccaatgatgagcgaggatgggcgggac ttgtcggaaagggcccccccgcctcgctcgtcctctcccgtgattggtagcccaccagtg agggctgtgcctatcgggactccacccaagcagccgatgagtcatgctttgaatcatcag cagcagatccaccaccccaccgctgttcatgtgcgagccccggtccaccaccaacaccgc taccccccttccttccccgagcgcatctctcccaacaccctcttaaacatcgctaactct cctctgtgtcgtcctccgttcccggccggcgtgggccccgttctgtcccagatccaacgc gcccagatgctcaactctcaggttgctggcttccctaggggctgtcagggtcccccgttg ctgcctggtggcggaggcttcaggcccttcttcggccagccccctccccacaggatgggt ccccaccccggcgggccccctcccaaccacgtcccctgtcccatcatccggcacaacacc acgcacctgcacccccagcaccgccgcatgctcacccagaggatgcagagtagaggaggt gagcgtggcgggcgtgtgggggactggcggagcagggacccctacagtaacttgatgacc cagagggagaaggagtgggtggccaagatccagatgatgcagctgcagagcactgatccc tacctggatgactactactaccagaattactttgagaagatggagaagaggcaggagcga gacagagacggcgtgaggaaggagcacaccaccaaactcatcaccccccaggtggccagg ctggaacacacctacagaccagtgcagtttgcaggctcgctgggtaagctgactgtgtcc agcgtcaacaaccccaggaagatgatcgacacggtggtgaccagtcgcactgacgacgag gagaagagagagaaacaggtgtggaataagagacggcagatcctctacactgtggagaag atgtacagtctgctgctggaggtgcaggactttgagaagcgcttcatgcagacgccggag gagcagagagaggccctgctggagcagcacaaaacccacacgctgcagctctacagctcc ctcaaggagaaggagtgggacgacagagtgagtgacgagcagtgcctgttgatcatgtcg gtgcgtaagggaaagcgcctcatctccaggctcatccctttcctgcctccgctgcaggcc gccaccgttgtcatggggattgcccggaacctgcccgccctggccaagaaagacaaacag gaccaggtgctgtgctggttggtggagcccattgccgtggtgatctcatccctatctagc gcctccctcacagatttgctgcaggagctgcaaggcagcgagggtcaactgtccagagtg ttacaaaataagtttggtgtgacactgctttacctgatcctgagtgaaggagagaggatg cagagctccaaccccacctgtcaactcatggatgacaatcgatggacagagttggtgttc tctgtgaccagggagctgctcatcgtgccctcctcgtccctgtcccctcctctcttcacc cctcccaacctgctctctctcttctcgcgctacgtagaccgacagaggctggagctgctg caggagaagttacagatctccgcattgtccaggtag

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