Entry |
|
Name |
(RefSeq) THO complex subunit 4-like
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KO |
|
Organism |
stru Salmo trutta (river trout)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:stru00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115202155
09122 Translation
03013 Nucleocytoplasmic transport
115202155
03015 mRNA surveillance pathway
115202155
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115202155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:stru03019]
115202155
03041 Spliceosome [BR:stru03041]
115202155
Messenger RNA biogenesis [BR:stru03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115202155
TREX complex
115202155
Spliceosome [BR:stru03041]
Complex C
Other components
EJC/TREX
115202155
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115202155
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
|
Position |
1:57133606..57137044
|
AA seq |
266 aa
MADKMDMSLDDIIKQNRQQRGGAGGRGGGRGRGRGGSGGGRGGVGRGATGGGFGGRGGGS
GPMRNRPNLSRGRARPTPYSRPKQLPDKWQHDMYGNHGFNASVGGGGGGAGVETGGKLLV
SNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVP
LDGRPMNIQLVTSQIDTQRRPPMQGMIRGGGMNRGRGGGFRGMQRGRGAGRGGGRGRGGR
GGSTKPLSAEELDAQLDAYNARMETS |
NT seq |
801 nt +upstreamnt +downstreamnt
atggccgataagatggatatgtctctagacgacatcatcaagcagaacaggcagcagaga
gggggcgcaggaggccgtggtggtggaagaggccgtggccggggaggctctggcgggggc
cgaggtggtgttggccgtggagcaactggtggcggctttggtggccgaggtggaggatcg
ggccccatgaggaaccgaccgaacctgagccgtggcagagcaagacctacgccatacagc
aggcccaagcagcttcctgataaatggcaacacgacatgtacggcaatcatggcttcaat
gccagtgttgggggcggcgggggtggtgctggtgtggaaaccggagggaaacttcttgtc
tccaatctcgactttggcgtttcagacgcagatattcaggagctctttgcggagtttggt
acactgaagaaggcagctgttcactatgaccggtcgggcaggagcttaggcactgcagat
gtccactttgagaggaaggccgatgctctaaaagctatgaaacagtacaacggtgtacca
cttgatgggcgtcccatgaacatacaactcgtcacatcacagatcgacacacaaagacga
ccacccatgcagggtatgatccgaggtggtggcatgaacaggggtcgtggcggtgggttt
agagggatgcagagaggacgtggagcaggtcgtggaggaggcaggggccgaggtggccgc
gggggaagcactaagccactttccgccgaagagttggatgcccagctagatgcctacaat
gccaggatggaaacaagctaa |