KEGG   Salmo trutta (river trout): 115202155
Entry
115202155         CDS       T08542                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
stru  Salmo trutta (river trout)
Pathway
stru03013  Nucleocytoplasmic transport
stru03015  mRNA surveillance pathway
stru03040  Spliceosome
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115202155
  09122 Translation
   03013 Nucleocytoplasmic transport
    115202155
   03015 mRNA surveillance pathway
    115202155
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115202155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stru03019]
    115202155
   03041 Spliceosome [BR:stru03041]
    115202155
Messenger RNA biogenesis [BR:stru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     115202155
    TREX complex
     115202155
Spliceosome [BR:stru03041]
 Complex C
  Other components
   EJC/TREX
    115202155
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    115202155
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 115202155
NCBI-ProteinID: XP_029621950
Ensembl: ENSSTUG00000017883
LinkDB
Position
1:57133606..57137044
AA seq 266 aa
MADKMDMSLDDIIKQNRQQRGGAGGRGGGRGRGRGGSGGGRGGVGRGATGGGFGGRGGGS
GPMRNRPNLSRGRARPTPYSRPKQLPDKWQHDMYGNHGFNASVGGGGGGAGVETGGKLLV
SNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVP
LDGRPMNIQLVTSQIDTQRRPPMQGMIRGGGMNRGRGGGFRGMQRGRGAGRGGGRGRGGR
GGSTKPLSAEELDAQLDAYNARMETS
NT seq 801 nt   +upstreamnt  +downstreamnt
atggccgataagatggatatgtctctagacgacatcatcaagcagaacaggcagcagaga
gggggcgcaggaggccgtggtggtggaagaggccgtggccggggaggctctggcgggggc
cgaggtggtgttggccgtggagcaactggtggcggctttggtggccgaggtggaggatcg
ggccccatgaggaaccgaccgaacctgagccgtggcagagcaagacctacgccatacagc
aggcccaagcagcttcctgataaatggcaacacgacatgtacggcaatcatggcttcaat
gccagtgttgggggcggcgggggtggtgctggtgtggaaaccggagggaaacttcttgtc
tccaatctcgactttggcgtttcagacgcagatattcaggagctctttgcggagtttggt
acactgaagaaggcagctgttcactatgaccggtcgggcaggagcttaggcactgcagat
gtccactttgagaggaaggccgatgctctaaaagctatgaaacagtacaacggtgtacca
cttgatgggcgtcccatgaacatacaactcgtcacatcacagatcgacacacaaagacga
ccacccatgcagggtatgatccgaggtggtggcatgaacaggggtcgtggcggtgggttt
agagggatgcagagaggacgtggagcaggtcgtggaggaggcaggggccgaggtggccgc
gggggaagcactaagccactttccgccgaagagttggatgcccagctagatgcctacaat
gccaggatggaaacaagctaa

DBGET integrated database retrieval system