Salmo trutta (river trout): 115202191
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Entry
115202191 CDS
T08542
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru02010
ABC transporters
stru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115202191
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115202191
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115202191
Transporters [BR:
stru02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115202191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
115202191
NCBI-ProteinID:
XP_029622012
Ensembl:
ENSSTUG00000011928
LinkDB
All DBs
Position
11:complement(7083825..7118213)
Genome browser
AA seq
2279 aa
AA seq
DB search
MTVSTQLGLLLWKNFTYRRRQTLQLIIEIIWPLFIFFILISVRMHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRHPTPGESPGLVGNFNDSIISRLFIDAKKILLYSQNDK
SFEGYKVLVRALGKLQSNTAGFKLKDFLRDKETLSSFLHRNASLSHHAVQQIVEADLNLE
KVLIGGFGVHLRDMCNTTSLEEFVTISDKNVSRLTQDIICKASPDWLNKAQDHFLSNLDF
LKPIRKDVKSDPEVVQKVSAATDGLLESLGALAVELASMKSWKEMRNEIHYLTANATGSP
SHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGGNGSDDEPVSAYDNTSTPY
CNSMMRSLEASPISRMIWRALKPLLMGKILYTPDTPATQRIIHEMNKTFQELGILRDLGG
MWEEMRPKVWNFMESSEEMDLFRTLLQNNASSRFFNDRLAGTEWKVEDVSRFLTKAAEDK
RPAGSAYTWREVFNETDDAIKTISRFMECVNLDKLEPVANEERLVNKSMGLLDNQKFWAG
IVFPDIARSNSSDLPGNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFS
YLQDVIEQGIIRAVTGSKEKTGVYIQQMPYPCYVDDMFLRVMSRSMPLFMTLAWMYSVAL
IIKGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISASLLVVILKMGNLLPYSD
PCVVFLFLASFAVVTIMQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFG
AKVIVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPLEEDSYSLTTSICLMLFDSFL
YGVMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKQGKNIQERKEGNAEAVCIEEEPSHI
EPGVYIKNLVKVYSHGNKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYILGKDIRSELSAIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKAEMEQI
VNDIGLPHKRQCRSNTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLL
KYRPGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDLD
LTLSSCRNSSSSSVSYSKKVGLPQPQPQALTVLKEDSVSESSSDAGLGSEPESEATTIDV
TMISNVIFKHVPAARLVEDLGHELTYVLPYKAAKGGAFVELFHEIDDRLSDLGISSYGIS
DTTLEEIFLKVAEDSGVDVAELPNSDGTIPARRHRRHAFGDHQSCLKPFNEDDAFDFNDS
EESRETDWLGGSDGKGSYQVKGWRLIRQQFVALIWKRFLYARRSRKGFFAQIVLPAVFVC
IALVFSLIVPPFGKYPSLELEPGMYEEQFTFISNDAPEDANTNKLLGALTNYDGFDSRCN
SPHAPCNTLDDEWVVPEVPESVRDIFMNGNWSMGNPSPLCECSCEGRKKMLPECPAGAGG
LPPPQVKISDKGTLQNLTGRNISDYLVKTYAQIIGKSLKNKISVNEFRYGGFSLGARNTQ
LLPPGDDIDQAISEIRRRFHLERGTAADRFLASLSSFIQGLDTKNNVKIWFNNKGWHSIG
SFLNVMNNGILRASLPAGQDPREYGIRAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIF
AMSFVPASFVVFLIQERVNKAKHMQFISGVQPFLYWLSNFIWDMCNYIVPATLVIIIFIC
FQQDAYVSSTNLPVLALLLLFYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSV
STFVLELFGSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSP
LAWDMVGKNLFAMAVQGVVFFTITVLIQYRFCIKARSMSTDQKPIGEEDEDVARERQRIL
GGGGQSDILELRQLTKVYNRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDS
IVTSGEAYLAGKSVLTEINEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCE
VAEWGIRKLGLIKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRAL
WNCILSIVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIIL
RVAGPDPDLRPVMEFIEKELPGSTLKEKHRNMLQYQLSSSKTSLARIFSILAKNKEWLHI
EDYSVSQTTLDQVFVNFAKDQSDEDHLKDISMHKRDAVAVDITQLKSFLTDEKARESCV
NT seq
6840 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtctctactcaactgggcttactgctgtggaagaacttcacctacagaaggaga
cagacactccagctaattatcgagataatatggccgctcttcatcttcttcatcctcata
tctgtgaggatgcattacccaccctacgaacaacatgagtgccatttccctaacaaggcc
atgccctcggcgggcaccttgccctgggtacaagggatcatctgtaacgccaacaacccc
tgcttccgccaccccacaccaggagagagcccagggctggtgggcaacttcaacgattct
ataatctcccgtctgttcatcgatgccaagaagatcctcctctacagccagaatgacaag
agcttcgagggctacaaagttctggtgcgggctctggggaaactacagagcaacacggca
ggtttcaagctgaaggactttctccgcgataaggagaccttatcgtcgttcctgcatcgc
aacgcctccctatcccatcacgccgtccagcagatcgtagaggctgacctcaacctagag
aaggtgctgattggaggtttcggcgtccatcttagagacatgtgtaacaccacttctctg
gaggagtttgtgaccatctccgacaagaatgtgtcacggctcactcaagacatcatctgc
aaggcctcccctgattggctgaacaaggcccaggaccacttcctgtccaacctggacttc
ctgaaacccatacggaaggacgtgaagtccgaccctgaggtcgtccagaaggtatccgcg
gcaaccgacggtctgctagagagcttgggagcgctggctgtagagctggccagtatgaag
agttggaaggagatgcgtaacgagatccattacctgacggccaacgccacaggctccccc
agccacatgtaccaggctgtgtcccgtatcgtctgtggccaccccgagggcggcggactg
aagatcaagtcgctcaactggtacgaggacaacaactacaaggccctgttcggtaaccat
ggcggcaacggcagcgacgacgaacctgtgtccgcctacgacaacacctcaactccgtac
tgtaacagcatgatgaggagtctggaagctagccccatctccaggatgatctggagggcc
ctgaagcctctcctcatgggaaagatcctgtacacccccgacactcccgccacacagagg
atcatacacgagatgaacaagacattccaggagctgggtatcctgagggacctgggtggg
atgtgggaggagatgaggcctaaagtctggaacttcatggagagcagtgaggagatggac
ctgtttcggacactgcttcagaacaacgccagttcccgtttcttcaacgaccgtctggct
ggcacagagtggaaggtggaggacgtgtcccgcttcctgaccaaggctgcggaggacaaa
cgccccgccggctcggcctacacctggagagaggtgttcaacgagaccgacgacgctatc
aagaccatctcccgctttatggagtgtgtgaacctggataaactagagccagtggccaat
gaggaaagactggtcaacaaatccatgggtctcctagacaaccagaagttctgggctggg
atagtgtttccggacatcgcccgtagcaacagttctgacctgccgggtaacgtcaactac
aagatccgcatggacatcgacaacgtggagcgcaccaacaagatcaaggacggttactgg
gaccctggtccccgggcggacccctttgaggacctgcgctacatctggggtggtttctcc
tacctgcaggacgttattgaacagggcatcatcagggcggtgacgggcagcaaggagaag
actggagtttacatccaacagatgccttacccctgctacgtcgacgatatgttcctgcgg
gtgatgagtcgctccatgcctctcttcatgaccctggcctggatgtactctgtggccctc
atcatcaagggcgtggtctatgagaaggaggcgcggctcaaagagaccatgaggatcatg
ggattggacaacggcatcctgtggctcagctggttcatcagcagcctcatccccctgctc
atctccgcctcgctgctggtggtcatactcaagatggggaacctgcttccctacagcgac
ccttgcgtggtcttcctgttcctggcttcctttgctgtggtaaccatcatgcagtgcttc
ctcatcagtaccatcttctcccgcgccaacctggcggcggcctgcgggggaatcatctac
ttcaccctctacctgccctacgtcctctgtgtggcctggcaggactacgtgggcttcggg
gctaaagtaattgtgagcctgttgtccccggtggcgtttgggttcggctgtgagtacttt
gccctgtttgaggagcagggagtgggaatccagtggtccaacctgttgtccagccccttg
gaagaggacagctactccctcaccacctccatctgtctcatgctgtttgactccttcctc
tacggggtcatgacctggtacatcgaggctgtcttccctggccagtatgggatccccaga
ccctggtacttccccttcaccaagtcctactggtgtggagagaaacaagggaagaatata
caagaaagaaaggaaggaaacgcagaagctgtgtgcatcgaagaggagccgtctcacatc
gagcctggtgtttacatcaagaacctagtgaaggtgtatagccatggcaacaagctggct
gtagacgggttgaccctgggtttctacgaggggcagatcacctctttcctggggcacaac
ggagccggcaagaccaccaccatgtccatcctgacgggtctgttcccgcccacctctggc
accgcctacatcctgggcaaggacatccgctcggagctcagcgccatccgacagaacctg
ggtgtctgcccgcaacacaacgttctcttcagcatgctgacggtggaggagcacatctgg
ttctatgcccgtctgaagggtctgtctgaggagaaggtgaaggctgagatggagcagatc
gtcaacgacatcggcctgcctcacaaacgccagtgtcgtagcaacacgctgtccgggggc
atgcagaggaaactgtcagtggcgttggctttcgttggagggtcaaaggtcgtgatcctg
gatgaacccactgctggagtcgacccctacgcacgccggggaatttgggacctgcttctg
aagtatcgtccaggccgcaccatcatcctctcaactcaccacatggacgaggcggacatc
ttgggcgaccgcatcgccatcatctcccacggcaagctgtgctgcgtgggctcctccctg
ttcctgaagacccagctggggacgggctactacctgaccctggtgaagagagacttggac
ctgaccctcagctcctgtaggaactcctccagcagctctgtctcctacagcaagaaggtg
ggcctccctcagccgcaacctcaggccctcacagttctaaaggaggacagtgtttctgag
agcagctcagatgctgggctgggtagtgaacctgagagtgaagccaccactattgacgta
accatgatctccaatgtgatcttcaagcacgtccccgctgccaggctggttgaggacctg
ggccacgaactcacctacgttctgccctacaaggcggccaaaggcggagccttcgtggaa
ctcttccacgagatcgacgaccgcctgtctgacctcggcatctccagctacggcatctca
gacaccaccctggaagagattttcctgaaagtagcagaggacagtggagtggacgttgct
gaacttcccaactctgatggcaccatcccggctcgtaggcaccgcagacatgcgttcgga
gaccaccagagctgtctgaaacccttcaacgaggacgacgctttcgacttcaacgactca
gaagaatctcgcgagacggactggctgggaggctcggatggtaaaggctcgtaccaggtc
aaaggctggcgtctgattagacagcagtttgtggcgttgatatggaaacgcttcctgtat
gcccggcgctccaggaaaggcttcttcgctcagatcgtgcttcctgctgtgtttgtgtgc
atcgccctcgtcttcagtctcatcgtccctccgtttggaaagtatcccagcctggagctg
gagcctggcatgtatgaagaacagttcaccttcatcagcaacgacgcccctgaggatgca
aacactaacaagctgttgggtgccctgacaaactacgacggctttgattcacgctgtaac
tcacctcatgccccttgcaacacgttggatgacgagtgggtcgttcctgaggtaccggag
agtgtgagggacatctttatgaatggcaactggagtatgggaaacccctctcctctgtgt
gagtgcagctgtgaaggacgcaagaagatgctacctgaatgcccagcgggagctggtggt
cttcctcctccacaggtgaaaatcagtgacaaaggtaccctgcaaaatctgactggcaga
aatatctcagattacctggtcaaaacctatgctcagattatcgggaaaagtttgaagaac
aaaatctcggtcaatgaattcagatatggcggattctcattgggcgctaggaacactcag
ctcctcccaccaggtgatgatattgatcaggccatctctgagatcagacgacgcttccac
ctggaaagagggactgctgctgaccgtttcctcgccagcttgtccagttttatccaggga
ctggacactaagaacaacgtcaagatctggttcaacaacaaggggtggcacagcatcggt
tctttcctgaacgtgatgaacaacggaatcctgcgcgccagcctgcccgccggccaggat
cccagggagtatggcatccgtgccttcaaccacccactcaacctcaccaaggagcagctg
tcccaggtcgcactgatgaccacctccgtggatgtgctggtgtccatctgcgtgatcttc
gccatgtctttcgtcccggccagcttcgtagtcttcctcattcaggagagagtcaacaag
gccaagcacatgcagttcatcagtggcgtgcagcccttcctctattggctgtccaacttc
atctgggacatgtgtaactacatcgtccctgctactctggtcattatcatcttcatctgt
ttccaacaagacgcctacgtctcctccaccaacctgcctgtactggccctgctgctgctg
ttctatgggtggtccatcacgcccctgatgtaccccgcatccttcttcttcaagatcccc
agcacggcctacgtggtgctcacctccgtcaacatcctcatcggcatcaacggcagcgtc
tccaccttcgtcctcgagctcttcggcagcaacgagatcggagggatcaacgacatcctg
aagaacgtgttcctgatcttccctcacttctgtctgggccgaggcctcatcgacatggtg
aagaaccaggccatggccgacgctctggagaggtttggtgagaaccggttccgttcccct
ctggcgtgggacatggtgggcaagaacctgttcgccatggctgtgcagggcgtggtcttc
ttcactatcaccgtgctcatccaataccgcttctgtatcaaggccagatctatgagcacc
gaccagaaacctattggtgaagaggatgaagatgtggccagagagaggcaaaggattctg
ggaggagggggacagtctgacattctggaactcaggcagctgaccaaggtgtacaataga
aaacagaaaccagcagtggatcgtctttgtgtgggaattcctccaggagagtgttttggt
ctgcttggagtcaacggagcaggaaagacgagcaccttcaagatgctgactggagactca
atagtcacgagtggagaagcttacctggcgggaaagagtgtgttgacggagatcaacgag
gtgcaccagaacatgggctactgccctcagtttgatgctatcaacgacctgctgactggc
agggagcacctggagttctacgccatcctgaggggggttcccgagaaggaagtgtgtgag
gtggcagagtggggcatccgtaaactaggcctgatcaagtatgtggacaaggcagcaggg
agctacagtggagggaacatgaggaaactctccacggccatggcactgatcggtggtcca
ccagtggtcttcctggacgagcccaccactggtatggaccccaaggccagacgggctctg
tggaactgcattctcagtatcgtcaaggagggccgatcggtggttctcacctcgcacagt
atggaggagtgtgaggccctgtgtacgcggatggccatcatggtcaatgggaggttccgc
tgcttgggcagcgtacaacacttaaagaacagatttggggatggctacaccatcatcctc
cgggtggcaggacctgacccggacctgaggccggtgatggagttcattgagaaggagctt
ccaggcagcactctgaaggagaaacacaggaacatgctgcagtatcagctgtcctcctcc
aaaacctccctggcacgcatcttcagcatcctggccaagaacaaggagtggctgcacatt
gaggactactccgtttcccagacaacactagaccaagtatttgtcaatttcgccaaggac
caaagtgacgaggaccacttaaaagacatttcgatgcacaagagagacgcggtggcagtg
gacattacacagctcaagtctttcctcacagacgagaaggccagggagagctgtgtgtga
DBGET
integrated database retrieval system
