Salmo trutta (river trout): 115202204
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Entry
115202204 CDS
T08542
Name
(RefSeq) glycine receptor subunit alpha-3-like isoform X1
KO
K05195
glycine receptor alpha-3
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115202204
04082 Neuroactive ligand signaling
115202204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115202204
Ion channels [BR:
stru04040
]
Ligand-gated channels
Glycine
115202204
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
115202204
NCBI-ProteinID:
XP_029622041
Ensembl:
ENSSTUG00000034335
UniProt:
A0A674C2L7
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Position
11:10874767..10974217
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AA seq
465 aa
AA seq
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MTRKRLRSVAVWGFFAWEIAVLLSLVASKEPESPRGRAVHPPSPSDFLDKLMGRTSGYDA
RIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYTEYPDGSLDLD
PSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFP
MDVQTCIMQLESFGYTMNDLIFEWQENGPVQVADGLTLPQFIMKDETDLRYCTKHYNTGK
FTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ
SSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRLRPRRTKKKD
DDVRESRLSFTATTGGGGTAVKDGTIPKATNNTATTLGAAGPQPTQQPKKDPAAKSHEEM
RKLFIDRAKKIDTVSRAGFPLAFLFFNIFYWVLYKILRAEDVHKD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggaaaaggctgcgctctgtagctgtatggggattcttcgcgtgggaaatagct
gtgttgctcagtctggtggcgtctaaagagccagagagtcctcgggggagagcagtgcat
cctccgtcaccctctgacttcttggacaaactcatggggagaacctcaggctacgacgcc
agaattaggcccaactttaaaggtcctcctgtgaatgtatcatgcaacatattcatcaac
agctttggctccatagctgagactacaatggactacagagtgaacatcttcctccgtcaa
aagtggaacgaccccaggttagcgtacacagagtaccctgacggttctctggacctggac
ccctctatgttggactctatctggaaacctgacttgttcttcgccaacgagaaaggggct
catttccacgaagtcaccacagacaacaagctgttaagaatattcaagaatggcaacgtc
ctctattctatacgattgacattaaccctttcctgtccgatggacctgaagaacttcccc
atggacgtacagacgtgtatcatgcagctagagagctttggctacacaatgaacgacctg
atctttgagtggcaggagaatggaccagtccaggtagctgatgggttgaccctcccacag
ttcataatgaaggatgagacggatctgagatactgcaccaagcactataacacagggaag
ttcacgtgcatcgaggtgcgtttccacctggagagacagatgggttactacctgatccag
atgtacatcccctctctcctcatcgtcatcctctcctgggtctccttctggatcaacatg
gacgccgcgcccgctagggtggcactgggcatcaccaccgtgctcaccatgaccacccag
agctccggttctagaacgtctctacctaaggtgtcctatgtgaaggccatcgacatctgg
atggcggtgtgtctgctcttcgtattctccgctctgctcgagtacgccgccgtcaacttc
gtctccaggcaacacaaggaactcttaagactccggccgcggagaacgaagaagaaggac
gacgacgtgagggagagccgcctgagcttcaccgccacgaccggcggtggcggcacagcg
gtcaaggatggcaccatcccgaaggccaccaacaacaccgccaccaccctgggcgccgcg
gggccacagcccacccagcagcccaaaaaggaccctgccgccaagagccacgaagagatg
agaaagctgttcatcgaccgcgccaagaagatcgacacggtatcgcgggcgggtttcccc
ctggccttcctgttttttaacattttctactgggtcctgtacaagattctccgggctgag
gatgtgcacaaggactag
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