Salmo trutta (river trout): 115202247
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Entry
115202247 CDS
T08542
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115202247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115202247
03036 Chromosome and associated proteins [BR:
stru03036
]
115202247
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
115202247
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
115202247
RSF complex
115202247
WICH complex
115202247
B-WICH complex
115202247
NORC complex
115202247
BRF complex
115202247
NuRF complex (fruit fly)
115202247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
115202247
NCBI-ProteinID:
XP_029622100
Ensembl:
ENSSTUG00000011757
LinkDB
All DBs
Position
11:complement(13717119..13727836)
Genome browser
AA seq
1032 aa
AA seq
DB search
MSETGNGVELREEQAVELEETGGVEEKDDASEASKEESSEAGQDAQDEDPSSSTAPAYEE
KVASDRTNRFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRVKKDEKQNLLSVGDNR
HRRTEQEEDEELLSESSKTTNVCTRFDESPSFVKGGTMRDYQVRGLNWLISLYENGINGI
LADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIG
DREQRNALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSE
IVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVE
RLHTVLRPFLLRRIKNEVEKSLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNSAGKMD
KMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLAVNSGKMAVLDKLLPKMKAQGSRV
LIFSQMTRMLDILEDYCMWRNFGYCRLDGQTPHEERQISINAYNEENSPKFIFMLSTRAG
GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENTVEERIVERAE
MKLQLDSIVIQQGRLVDPNANKLGKDEMLSIIRHGATHVFASKESDITDDDIDEILERGE
KKTMELKEKMNTMGESSLRNFTMESDNSVYTFEGEDYREKKKVVTNWIEPPKRERKANYA
VDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVPRN
PELPNSAQHQKEEQAKIDEAEGLSEEELEEKENLLSQGFTIWNKRDFNQFIKANEKWGRD
DIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDT
KIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFEKESVYDELRQCIRNSPQF
RFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKKGPRSQSSAQKRKGEGTP
DQRGGRRKKLKL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagactggaaacggcgtggagctgcgggaagagcaagcagttgaacttgaagaa
accggaggagtggaggaaaaggatgacgcgtcagaggccagcaaggaggagtcttctgaa
gccggacaggatgcccaagatgaggacccctcttcatctacagcgccagcctatgaggag
aaagtggcatcagaccggaccaacagatttgagtacctactgaagcagacagaggtgttt
gcccatttcatccaacctgcggcccagaagacccccacctccccgctcaagatgaagcca
ggacgccctcgtgtcaagaaggacgagaaacagaatctcctctcggtcggagataaccgt
catcgtcgcacagagcaggaagaggatgaagagctgctgagcgaaagcagcaagaccacc
aacgtctgcacccgcttcgacgaatctccctcctttgtaaaagggggtacaatgagagac
taccaggtccgtggtctgaactggctcatctctctgtacgagaacggaatcaacgggatc
cttgctgatgaaatgggtttgggtaagaccctgcagaccatctctctgctggggtacatg
aagcactacaggagcatccccgggccccacatggtgctggtgcccaagtccaccctgtac
aactggatgaacgagttcaaacgttgggtcccctccctcaaagcagtctgcctcatcgga
gaccgagagcagaggaatgccctgatcagagatgtgctgctgccaggggagtgggatgtg
tgtgtcacctcttacgagatgctcatcatagagaaggccgtgttcaagaagtttaactgg
aggtacctggtcatcgacgaggcccacaggatcaagaacgagaagtcaaagctgtctgag
atagtgcgtgaattcaagaccaccaaccgtctgctgctaaccggcaccccgctgcagaac
aacctccacgagctctgggccctgctcaacttcctgctgccagacgtcttcaactcctca
gaggactttgactcgtggtttgacaccaacaactgcctgggggatcagaagttggtggaa
cgtcttcacactgtactgcgtcctttcctgctgcgtcgtatcaaaaatgaggtggagaag
tctctgctgcctaagaaagagatcaagatgtatgtggggctgagtaagatgcagagagaa
tggtacaccaagatcctgatgaaggacatagacatcctgaactctgcagggaagatggac
aagatgcgtctgctcaacgtcttgatgcagctgaggaagtgctgcaaccacccgtacctg
tttgacggggccgagcccggcccgccttacaccaccgacctgcacctggccgtcaacagc
ggcaagatggctgtccttgacaagctgctgcccaagatgaaggcccagggctcccgtgtg
ctgatcttcagccagatgaccaggatgctggacatcttggaggactactgcatgtggcgc
aacttcggctactgtcgcctggacggacagacgccccacgaggagagacagatctccatc
aacgcgtacaatgaggagaacagccctaagttcatcttcatgttgagcaccagggccgga
gggctgggtattaacctggccacagctgacgtggtcatcctctacgactcagactggaac
cctcaggtcgacctgcaggccatggaccgagctcacaggattggtcaaaagaagcaggtg
cgtgtgttccgtttcatcacggaaaacacagtagaggagaggattgtggagcgggccgag
atgaagctccaactggactccatcgtcatccagcaaggaaggctagtggatcccaatgcc
aacaagctggggaaggatgagatgctgtctatcatccggcacggcgccacgcacgtcttc
gcctccaaggagagcgacatcaccgacgatgacatcgacgagatcctggagcgaggcgag
aagaagaccatggagttgaaggagaagatgaacaccatgggcgagagctccctgaggaac
ttcaccatggagtccgacaacagtgtgtacaccttcgaaggagaggactacagggagaag
aagaaggtggtcaccaactggatcgagccacccaagagagagaggaaggccaactacgca
gtggatgcctacttcagagaggccctgcgtgtcagcgagcccaaagcacccaaggctcct
cgtccacctaagcagcccaatgtgcaggacttccagttcttccccccaaggctgtttgaa
ctgctggagaaagagatcctattctacaggaagactattggctacaaggttcctcgtaac
ccagaactgcccaactcggctcagcaccagaaggaggagcaggccaagattgacgaggcc
gagggcctatcagaggaggagctggaggagaaggagaacctcctctcgcagggcttcacc
atctggaacaagcgtgactttaaccagttcatcaaagccaatgagaagtggggcagagac
gacatcgagaacatcgccagagaggtggagggcaaaaccccagaggaagtcatggaatat
tccgctgtgttctgggagcgctgcaacgagctgcaggacattgagaagatcatggctcag
atcgagagaggagaggcccgcatccagaggaggatcagcatcaagaaagcactggacaca
aagattggtcgctacaaggcgccgttccaccagttgaggatctcgtacggcaccaacaaa
gggaagaactacacagaggaggaggaccgcttcctcatttgcatgctgcacaagctgggc
ttcgaaaaggagtcggtctacgacgagctgcgccagtgcatccgcaactcgccccagttc
cgcttcgactggttcctcaagtccaggaccgccatggagctccagaggcgatgcaacacc
ctgatcaccctgattgaacgagagaacatggagctggaggagagggagaaggcggagaag
aagaagaaaggaccacgtagtcagtcttctgctcagaagcgtaagggagaagggacccca
gaccagcgaggaggccgcaggaaaaagctaaagctgtga
DBGET
integrated database retrieval system
