Salmo trutta (river trout): 115202260
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Entry
115202260 CDS
T08542
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115202260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115202260
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115202260
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
HECT type E3
115202260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
115202260
NCBI-ProteinID:
XP_029622141
Ensembl:
ENSSTUG00000016572
UniProt:
A0A673YY31
LinkDB
All DBs
Position
11:complement(14408998..14449216)
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AA seq
1050 aa
AA seq
DB search
MMLCWGSTVEGQLGIGGARDPVCEPRSCQAFSGRGLKEVACGGRHSLFLLRDGRVYTCGS
NRCGQLGHDKPGDSPELVVALDTQKIGVVSCGQAHSMALNEHGQVFAWGAGGGGQLGLGT
AEETVPIPRLIKKLCEHRISQIMCGNKHCIALSKDGQLFTWGQNSSGQLGLGKGEPSTLS
PQPVKSLSGIPLAQITAGGDHSFALSLSGAVFGWGKNSAGQLGLNDKQDRSVPCHIKFLR
SQKVVYISCGDEHTAALTKDGGLFTFGDGSRGQLGHDSTNSEPLPRQVQELMGSEVSQIA
CGRHHTLAFVPSSGLVYAFGCNTNGQLGTGTRGDIKSPLPVKSSLTGRLTGSPRHMSGPD
HYAITKINCGGDHNFLLYSDEKSSTAPEDFRVTNISRSISLINDASLNTWRMKLLDNTDS
TITNDVILLLSSTACWNASFLDESDDSHFKTNPKVPGIDLNSVRLLFETLSKPPFARLLE
QATKSFESLLIPQLPCSPPDVEAMRIYLILSECPALHDSKNYITLTIPLAMAILRLDANP
SKVLDNWWCLVDGGVFSRLVDMYKSIVVFLLTGGKALLVPVFLENYTSATLKLLEKLHKV
NLKAGHVEYNRFYIPDITTLVDIQEDYLKWFLSKAEIKMRTPAVQSSVTLCAYPFILNAQ
AKTTMLQTDAELQMQMAVSGANMHNVFMLLTLEPLLARNPFLVLHVRRDHLVSDALRELT
IYSDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTQYTQSNLLWFSDK
CFVEHNWFNLIGIICGLAIYNSTVVDLHFPQVLYKKLLGVAPTLEDLKELSPTEGRSLQQ
LLDHEEDDIEETFCLNFAITREYYGLTEVKELIPGGDRITVDKNNREEFVEAYLKYMFRD
SVSELYQAFSSGFLKVCGGKILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYSATHP
TVRMFWEVFHEFPLEKKKRFLLFLTGSDRIPIHGMESLRISIQSTSAEEHYLPVAHTCYN
LLDMPRYQTKETLHRRLTQAVEQYEGFSLV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgttggggcagtactgtggagggccagctgggtatcggcggagcgagggac
cccgtgtgcgaaccccggagctgccaggcgttcagtgggcgcggcctgaaggaggtggcg
tgcggcgggcgccattcgctattcctgttgcgtgatgggagagtgtacacgtgcggctcc
aaccgctgtgggcagctgggccacgacaagccgggggactcgccagaactggtggtggcc
ctggacacccagaagataggggtggtatcgtgcggccaggcccactccatggcgctgaat
gagcacggccaggtgtttgcctggggggccggtggagggggccagctgggtctggggacc
gctgaggagaccgtcccaatccccaggttgatcaagaagctgtgcgagcatcgcatctct
caaataatgtgtggcaacaagcactgcatcgcactctctaaagacggtcagctgttcacg
tggggccagaactcaagcggtcagctgggtttggggaagggtgagcccagcaccttgtct
ccccagcctgtcaagtctctgtcaggtatccccctggctcagatcaccgcagggggagac
cacagcttcgccctgtccctctctggagccgtgttcggctggggcaagaacagcgccgga
cagctggggctaaatgacaaacaggaccggtctgttccttgccacatcaagttcctcaga
tcccaaaaagtggtttatatcagctgtggagacgagcatacagctgccctcaccaaggat
gggggtttgtttacgtttggggacggctctcggggtcaactgggtcatgactccaccaac
agcgaacctctacccagacaggtgcaggagctgatgggcagcgaggtttcccagattgcc
tgtggcagacaccacaccctggcgtttgtgccttcctccggtctggtgtatgctttcggt
tgtaacaccaatggtcagctgggcaccgggacacgaggtgacatcaaaagcccacttcct
gtcaaaagcagcctcacaggaaggctcacaggaagtcctcgtcatatgtcagggccagat
cattatgccattacaaaaatcaactgtggaggggaccataacttcctattgtactcagat
gaaaagagttccaccgctcctgaagacttccgcgtcactaacatcagtagaagcatctct
ttgataaatgatgccagtttgaatacgtggaggatgaaactcctagacaacacagattcc
actatcaccaatgacgtcattctcctgctgtcttccaccgcctgttggaacgccagcttc
ctggatgagagtgatgacagccattttaagaccaaccctaaagtccctggcatcgatctc
aactcagtccgcctgctgtttgagacactcagtaaaccgcccttcgccagactactggag
caggccactaagagttttgagagcctgctgatcccccagctgccctgctctccccctgac
gttgaggccatgaggatctacctgatcctgtcggagtgtcccgccctgcacgactccaag
aactacatcaccctcaccatccccctagccatggccatactccgcctggatgccaacccc
agcaaagtgcttgataactggtggtgcctggtggacggcggtgtgttctccaggctggtg
gacatgtataagagcatcgtggtgttcctgttaaccggaggaaaggccctgctcgtccct
gtcttcctagaaaactacaccagtgccacgctaaagcttctagagaaacttcataaggtt
aacctgaaggccgggcatgtggagtacaaccgcttctatatccctgacatcaccaccctg
gtggacatccaggaagactacctcaagtggtttctgagtaaagcagagattaaaatgaga
acaccagcagtacagagctcagtgactttatgtgcctacccgttcatactgaacgcccaa
gccaagaccaccatgctgcaaactgacgctgagctacagatgcagatggcggtgagcggg
gccaacatgcataacgttttcatgctgctgacgctggaacccctcctggcgcggaacccc
ttcctggtgctccacgtacgcagggaccacttagtgagcgacgccctgagggagctcacc
atctactccgacgtcgacctcaagaagcccctcaaggtgatctttgatggggaggaggcg
gtggatgcagggggggtaaccaaggagttcttcctactgctgctgaaggagttgatggac
cctgtgtacggcatgttcacccagtacacccagtccaacctgctctggttctctgataaa
tgttttgtggagcacaactggttcaatctgatagggatcatctgtgggctggccatctat
aacagcaccgtggtggacctccacttcccccaggtcctttacaagaagctactgggcgta
gcacccactctggaggacctcaaggagctgtctcccacagagggcaggagtttacaacag
ctcctggaccatgaggaagatgacattgaggagacattttgtctaaactttgctatcacc
agagagtactatggtctgacggaggttaaggagcttatccctggaggagaccgcatcact
gtggacaagaacaacagggaggagtttgtggaggcctacctgaagtacatgttcagggac
tcggtgagcgagctgtaccaggccttctcctctgggttcctgaaggtgtgtggtgggaag
atcctgtcgctgttccagccctccgagcttatggccatggtggtgggaaacaacaactat
aactgggaggaaatggagaagaatgcggtttacaaaggagagtattcagccactcatccg
actgtgaggatgttttgggaggtattccatgagttccctctggaaaagaagaagcggttc
ttattatttctgacgggcagtgaccgcatccccatccatggcatggagagcctccgcatc
tccatccagtccacatcggccgaggagcactatctgcctgtggcccacacctgctacaac
ctgctggacatgccccgctaccagaccaaagagaccctgcatcgccgtctcacccaggcc
gtggagcagtacgagggcttcagcctggtttga
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