Salmo trutta (river trout): 115202321
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Entry
115202321 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115202321
03036 Chromosome and associated proteins [BR:
stru03036
]
115202321
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115202321
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115202321
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115202321
UBL E3 ligases
115202321
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
115202321
Cilium and associated proteins [BR:
stru03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115202321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-RING_5
RING_XB3-XBAT31
zf-ANAPC11
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
115202321
NCBI-ProteinID:
XP_029622262
LinkDB
All DBs
Position
11:complement(16521709..16525764)
Genome browser
AA seq
907 aa
AA seq
DB search
MAAAKMTLRLLKKSAPDKTSEVLSAEASPDSKCPICLDRFNNMAYLDLCLHKFCFRCIHE
WSKNKAECPLCKQPFNSIYHSIQSEKDFKKYDLRPTENGSFGSFAGERFRYRTTLTGARR
QDQRRTSPPPDNGVMFEALTGASPPPRQDQGLRRMMERLAARRQAESEGRTVRSLREQEM
IKFRRALYRRGVRVRSVRDGGRSRDISAEFFQRNPACLHRLLPWLKRELVVLYGAHGSLV
NIVQHIIMSRITRYDMEDRAIQEELQPFLQARTDHFLHEFVNFARAPFNMEAYDQHAVYD
CPAPSSDEGSSSNSSVIAISEDEEGGDSVELDPVSGVALSQSTWDDETPGPSYSTTEPTR
ALLLSIIDSDSESSLGEECGAVSQPKAPRLTAGSARVKTDKDGPACTSSGDEDCIIVGFV
KPLAERTPELVKLSSDSEESVLEESKDEVPRLLQHIRFTSLSPASSQGQCPGRAEGMERE
QDVSCSKERRNTSPSIRRETSSKSTSKNSGQTEKDGRRCQSRDRSRERPRSRSRDRRRRS
RSADRSRSTKSPAISINSDSTLSRGRRQSRSQSRDRSHTKGEKKRDNKDGRRSGRSHDSS
SHSYHWHYYSRESERDSSATLYTERRTYYSSSHRNIDCRSPSQSQSPDSHRRDKRRSRSR
SSTCSPSGAHRKSRHEKPSGKRKYKSRHLEEPDPKDKSSNALDEPPSSTTSSCAKDKKKK
KKSKEKRHRRSKEKSGGKRSRSLSVEIIYEGSSSEQTRKHQKKKKKHKKKGKRHRSKERT
GSGKHSPTVITIDSDSDQHTAAGANDANHTCPVSSSTSNYVLVPSTTTTTGNPADSGLLE
SMLQGWEQQIPPVGLDSGVLEVKPPLTAAATDTPTHSEGVLSQSASADEVNSHSPSNDNT
SHFLQES
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcaaagatgaccttacggctactcaagaagagtgccccggacaagacctct
gaggttttgtctgccgaggcgtctccagactctaagtgccccatctgtctggaccgattc
aacaacatggcctacctcgatctctgcttgcacaagttctgcttccgctgcatccacgag
tggtccaagaacaaagccgagtgcccgctatgcaagcagccattcaactctatctatcac
agtatacaatcagagaaggacttcaagaagtatgacctgcggcccacggagaacggttcc
tttgggagtttcgcaggggaacggttccgctaccgcaccacgctgacgggggcgcgtcgg
caggaccagagaaggacgtcccctccccccgacaacggggtcatgttcgaggccctaacg
ggggcttccccccctcctcggcaggaccaaggcctccgtcgcatgatggagcgcctggcg
gccagaaggcaggcagaaagcgagggccggaccgtgcgcagcctccgtgagcaggagatg
atcaagttcagacgggcgctctaccggcgaggggtgcgagtgcggagcgtgcgggacggc
ggccgttcccgggacatctcggcggagttcttccagaggaacccggcctgcctgcaccgc
ctgttgccctggctgaagagagagctggtggtgctgtacggtgctcacggctccctggtc
aacattgtgcagcacatcatcatgtcccgcatcacccgctatgacatggaggaccgggcc
atccaggaggagctgcagcccttcctccaggcccgcaccgatcactttctgcacgagttt
gtcaacttcgcccgagcacccttcaacatggaagcctacgaccagcatgccgtctacgac
tgccctgcgccgtcctcggacgagggcagcagctccaactcctcagtgatcgccatctcc
gaggatgaggaggggggcgattctgtggagctggaccccgtgtccggggttgccctgagc
cagtcaacatgggacgacgagacgcccggaccttcgtactccacaacagaacccaccagg
gccctgctgctatcaatcatagactcagactcggagagcagtttgggggaggagtgcgga
gcagtgtcacagccaaaggcccctcgcctgactgcaggctctgctcgggtgaaaaccgac
aaggatggaccggcgtgtacgtcctctggcgatgaggattgcatcatcgtgggctttgta
aaacccctagctgaaaggactccagagctggtcaagctgtcctctgactcagaggagtct
gttctggaggagagcaaagacgaagtgcccaggctgcttcaacacatccgcttcaccagc
cttagccccgcctcctctcaaggccaatgtcctgggagggcagaggggatggaaagggag
caagatgtatcgtgctccaaggaaagacgtaacacctcaccctcaattagacgtgagaca
tccagtaagtcaacaagcaaaaacagcggacaaactgagaaagacggcaggagatgtcaa
agtcgcgatagatctagagagaggccacggtcgagaagcagagaccggaggaggaggtcc
aggagtgccgaccgcagccgctcgaccaagagcccggccatctccatcaacagcgatagc
actctgtccagaggcaggaggcagtcgcgctcccaaagccgcgaccgctcccacactaaa
ggagagaagaagagggacaataaagatggccgccgatcaggccgcagccacgactcatcg
tcgcactcctatcactggcactactacagccgggagagtgagagggacagcagcgccaca
ctctacacagagaggaggacctactactccagctcacacaggaacatcgattgcaggtcc
ccatcccagagccagagtcctgattcccaccggcgggataagaggcgctccagaagtcgt
tccagcacgtgttcgccgtccggtgctcacaggaagtctcgtcacgagaagcccagcggg
aagagaaagtacaaatcgagacacctggaagaacctgaccccaaagacaagtcctccaac
gcccttgacgagcctccctcctccaccacctcgtcctgtgcgaaagacaagaagaagaag
aagaagagcaaagagaagcgtcacaggaggtccaaggagaagtcgggggggaaaaggagc
aggagcctcagcgtggagatcatctatgagggcagctcctcagagcaaaccaggaagcac
cagaagaagaagaagaagcacaagaagaagggcaagaggcacaggagcaaagagcgcaca
gggtccgggaaacactcgcccactgtcatcaccatagacagcgacagtgaccaacatact
gccgcaggcgctaacgatgctaaccacacctgcccggtaagcagcagcactagcaactac
gtgctagtacctagcacaaccaccaccacaggcaaccctgcagactctggcctgctggag
tccatgttacaaggctgggaacagcagattccacctgtgggtctggacagtggagtgttg
gaggtcaagcctcctctaactgctgctgctactgacacacccacacatagtgagggggtt
ctatcccaatctgcctctgcggatgaggtgaactctcatagcccttcaaatgacaacaca
agtcattttttgcaagaatcataa
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