Salmo trutta (river trout): 115202479
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Entry
115202479 CDS
T08542
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
stru
Salmo trutta (river trout)
Pathway
stru04020
Calcium signaling pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115202479
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115202479
04082 Neuroactive ligand signaling
115202479
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115202479
Ion channels [BR:
stru04040
]
Ligand-gated channels
Glutamate (ionotropic)
115202479
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
115202479
NCBI-ProteinID:
XP_029622494
Ensembl:
ENSSTUG00000014450
LinkDB
All DBs
Position
1:complement(57670787..57744781)
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AA seq
1438 aa
AA seq
DB search
MGVRLGRLSDSPWWWPLLLLLLCTAPWCQGRPFATPLPAVNVAVVFSGSAYQQEIKGRLS
RENFMDLPLEVNPITVLVNNTNPRALLTRICDTLAANRVHGVVFEDNIGSEAVAQILDFI
ALQTAVPIVGISGGSAMVLPHKGDGSTFLQLGSSIEQQINGMFKVMEEYNWDSFVVITSL
YPGYEVYVDYVKTFTDTSYFMWELQDVLTFDMSADGMNDIRARRLLQQIDAQVLLVYCSH
EEAQYLFSMAGEAGLLGPGYIWILPSLAVGNPDMPPPNSFPVGLISIITDRWRMSLRKRV
RDGVAIVVKGVQSFRKQRGFIPEGHNDCHSPVRASSNDTLFRHMLNVTWEHNDFSFNPEG
YLINPAMVIITLDRERQWDKVGNYEMGILQMRYPVWPRYGTYLEPVSDNRHLTVATLEER
PFVIVEAVDPMTGTCVSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRTTK
FSYDLYLVTNGKHGKLVRGSWNGMIGEVVYKRADMAIGSLTINEERSEIIDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYCSPVGYNRSLVSAK
GECQLRPPFPLPLPSRISKGRKSRKNPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTS
KVMVLVWAFFAVIFLASYTANLAAFMIQEQYTDTVSGLSDKKFQKPQEQYPPFRFGTVPN
GSTERNIRSNYPEMHAHMVKYNQKGVEDALNSLKSGKLDAFIYDAAVLNYMAGKDEGCKL
VTIGSGKVFATTGYGIALQKESRWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEV
MSSKLDIDNMAGVFYMLLVAMGLSLLVFSWEHLLYWKLRHSVRKSERLDFLLAISRGIYS
CFNGVEDSDRNGNLQNPDVTTNYTQANMLKMLQTAKDIVTSTRVENSLDNATKTIENWSR
RGADNVRVGLPPRVATTIDMGHSRLPYISSITDNHSPYPQRALASTFPIHYSDSATQPLL
DKSRVVTRPTPLRYTLPARGSHHFYERTLPISSLSSPHIAMRDPAPPSTSSHNPHPHHSS
RLYVESQPRHPTSPFVPYREFQVPDIYVEHHKRPLGRKFSYPPDHMGRKKKSHSYVFSEA
QDTRGRNDYDEPTSCLAELRANHLLNNHAPSASTLACMGGHYPSGSGSCNSCMKPYLEPE
MEDVPLLGKDKVNRQASFLKATWSSDRIRQLGEKPSTSTMPDLFPRVVVANPKPHKLYGS
QGNNLCYPLAAEPAYLDPAHMRSYPYKQQKLKCSQSTRLPSYREAILQNAAALRRSSSTV
VHRHYSTYLNSYTDLPVYLGPLPQGPGPFYDKDMCHLFPCASHCPNNNALVPRMGDRQVV
YQNNMFGGYEGAVGRSREEPPLPGSGSRERREVLVARRVNSPYVPKTWGRVSSLESEV
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtttaggccgcttgagtgactccccgtggtggtggccgctgctgctgttg
ctgctctgcactgccccctggtgccaaggtcggcctttcgcaacgcccttgccagcagtc
aacgtggcggtggtgttcagtggctcggcctaccagcaggagatcaaggggcgtctcagc
agggagaacttcatggacctgcccttggaggtgaatcccatcacagtgctggtaaacaac
accaaccctcgggccctgctcacacgcatctgtgacacactggcggccaaccgcgtacat
ggtgtggtgtttgaagacaacatcggctcggaagccgtggcacagatcctggacttcatt
gccctgcagacggcagtgcccatcgtgggcatcagcgggggctccgccatggtcctgcca
cacaagggcgacggctccacgttcctccagctgggctcctccatcgagcaacagataaac
ggcatgttcaaggtgatggaggagtataactgggacagcttcgtggtcatcaccagcctg
tacccgggctacgaggtctacgtggactatgtcaagaccttcactgacaccagctacttc
atgtgggaactgcaggacgtgctgaccttcgacatgtctgccgacggcatgaacgacatc
cgggcacggcgcctgctgcagcagatcgacgcccaggtactgctggtatactgctcccac
gaggaggcccagtacctgttcagtatggccggagaggccggcctgctggggcctggctac
atctggatcctccccagccttgccgtggggaacccagatatgcccccaccaaacagcttc
cctgtgggcctcatcagcatcatcaccgaccgctggcggatgagcttgaggaagagggtg
cgcgatggggtggccatcgtggtcaaaggggtgcagagcttccgcaaacagaggggcttc
atccccgagggccacaacgactgccacagcccggttagggcatcttctaatgatacactg
ttcaggcacatgttaaacgtaacatgggaacacaatgacttctcgttcaaccctgaaggg
tacctgatcaacccagctatggtcatcatcaccttagatcgagagagacagtgggataag
gtggggaactatgagatggggatcctgcagatgagatacccggtgtggcctcgctatggc
acctatctggagcccgtatcagataacagacacttgactgtggccacactggaggaacgt
ccctttgtcatagtggaggctgtcgaccccatgactgggacctgtgtcagcaacactgtg
ccctgccgccgccagtccaacaagacagagactattgtaggtcatactgagccctacacc
aaactgtgctgtaagggtttctgcatagacatcctgaagaagctgtcccgcaccaccaaa
ttctcatacgacctctacctggtcaccaacgggaagcacggcaagctggtcagaggcagt
tggaacggcatgatcggagaggtggtatacaagcgggcggacatggccattggctcgctg
accataaacgaagagcgctcagaaattatcgacttctccgtgccgttcgtggagacgggg
atcagtgtgatggtcgccaggagcaatgggaccgtctctccctctgcctttcttgagccc
tacagtccggcggtgtgggtgatgatgtttgtgatgtgcttaacggtggtagctgtcaca
gtgtttatctttgagtactgcagccctgtgggctacaaccggagtctggtgagcgccaag
ggtgagtgtcagctccgaccacctttccctctacctctaccctcccgtatcagcaaaggt
agaaagtcacggaaaaatcccggaggccccaccttcactattgggaagtctgtgtggctg
ctgtggggcatcgtcttcaacaactctgttccaattgagaaccccaagggcaccaccagc
aaggtcatggtcctggtatgggccttcttcgctgtcatcttcctggcctcctacactgcc
aacctggcagccttcatgatccaggagcaatacactgacacagtctctggactgagtgac
aaaaagttccagaagccacaggagcagtatccaccgtttcgttttggtacggtcccaaat
ggaagcacagagaggaacatccggagcaactaccctgagatgcatgcccacatggtcaaa
tacaaccagaagggtgtggaggacgccctcaacagcctcaaatcagggaaactggatgcc
ttcatctatgacgctgctgtgctgaactacatggcaggtaaagacgagggctgtaagctg
gtgaccatcggcagtgggaaggtctttgccaccactggctacggcatcgccttgcagaag
gagtcccgatggaaacgtcctatagacctggccctgctccagtttctagctgatggtgac
acacagaagctgcagacggtgtggctcacagggatctgtcgtaacgagaagaaggaagtg
atgagcagtaagctggacatagataacatggcgggcgtcttctacatgctgctggtggcc
atggggctcagtctcctggtgttcagctgggaacatctgctctactggaagctgagacac
tcagtacgcaagtctgaacgcctcgacttcctgctcgccatcagcaggggaatctacagc
tgcttcaacggtgtggaggactctgaccgcaacggaaacctgcagaaccctgacgtcacc
accaactacacccaggccaacatgctgaagatgctgcagacagccaaggacatcgtgacc
tcgaccagagtggagaactccctggacaatgccaccaagaccatagagaactggagccgg
cgaggagccgacaatgtgcgggttggcctgccgcctcgggtggcaaccactatagacatg
ggccacagccgcctgccctacatctccagcatcacggacaaccactcgccctacccccag
agggcgctcgcttccaccttccccatccactactcggacagcgccacccagcccctgctg
gacaaatccagggtcgtgacacggcctaccccgctccgctacacccttccggcccgtggc
agccaccacttctacgagaggaccctacccatctccagcctcagcagccctcacatcgcc
atgagggaccctgctcctcccagcacctccagtcacaacccacacccccaccacagcagc
aggctgtacgtggagagccagccccggcaccccacctccccgtttgtcccctacagagag
ttccaggtgcctgacatctatgtggaacaccacaagcggcccctgggacggaagttcagc
tacccccctgaccacatgggcaggaagaagaagtcccacagctacgtgttttctgaggcc
caagacaccagggggaggaacgactatgatgagccaacctcctgtctggctgagctgagg
gccaaccacctcctgaacaaccatgccccttctgcatcaacattggcctgcatggggggc
cactaccccagcggcagcggcagctgcaactcctgcatgaagccctacctggagcctgaa
atggaggatgtgcccttgctggggaaggacaaggttaaccgccaggcttcttttctcaag
gccacctggagcagtgacaggatccgccagctgggcgagaagccctccacctccactatg
cctgacctgttcccccgcgtagtggtggccaaccccaagccccacaagctgtacggcagc
caggggaacaacctgtgctaccccctggccgctgagcctgcctacctagacccggcccat
atgcgttcctacccctacaagcagcagaagctcaagtgctcccagtccacccggttacca
tcctacagggaggctatcctgcagaacgcagccgcattgcggcgctcctcctccactgtg
gtgcacagacactactccacctacctgaactcctacacagacctgcctgtatacttgggg
ccgctgccccaggggcccgggccgttctacgacaaggacatgtgccacttgttcccctgt
gcaagccactgccctaacaacaatgccctggtgccccgtatgggggaccggcaggtagtg
taccagaacaatatgtttgggggctacgagggtgcggtggggcggtcacgggaggagccc
cccctacccggatctggaagcagggaacgaagagaggtcctggtggccagaagagtcaac
agtccctatgtgccaaagacctggggcagggtatccagtctggagtctgaggtctga
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integrated database retrieval system
