Salmo trutta (river trout): 115202559
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Entry
115202559 CDS
T08542
Name
(RefSeq) low-density lipoprotein receptor-related protein 3-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115202559
Membrane trafficking [BR:
stru04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
115202559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
115202559
NCBI-ProteinID:
XP_029622540
Ensembl:
ENSSTUG00000037528
LinkDB
All DBs
Position
12:48301614..48337835
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AA seq
715 aa
AA seq
DB search
MPVPPGRLGQSSCQSDEFLCGNGKCLPRTWRCNGLDECGDATDERGCAPPPTPPRASLCP
AGTAPCTQAQSTRCLPHSLRCNGAQDCPDGSDEAGCPDTACGKRLGNFYGTFASPDFFRP
NRSALGELRCSWLLDTQDPKPIVLQLDLGLGPGDSLHVYDGLVQRAESLLRALSHHNNRR
PALLESSRGQMSLQYLAQPLSPGHGFNATYQVKGYCFPREHPCGGDQGCYSERQRCDGYW
HCPTGRDEEECPVCQEGEYPCEGGSGACYPASERCNNQKKCPDGSDEKNCFDCQPGNFHC
GTNLCIFETWRCDGQEDCLDGSDERDCLGAVPRKVITAALIGSLVCGLLLVVALGCAFKL
YSLRTREYRAFETQMTLLEAEFVQREAPPSYGQLIAQGLIPPVEDFPVYNPTQASMLQNI
RTAMRRQIRRHSSRRATSHRRLGRLWNRLFHRGTRLRGQIPLLTPPGSQVALGLHSYHTS
EGPGARVVDGGGVAGMVAGTGPARTPSRCSTAAVGLALHAHNQALPQSHPSLESPCSPLS
PSDSEPSEGSLCSPESQGSRVRLPLSELSTPGQQSDSLTSVPSILSQQCPPEGSTGHYTR
RASRKLVLGLAANLRGVALRRYSPMGLTSPVTPPVLPPPDSQPPCHHPLTSPQMSPPSGS
SDDSQRFHALEVPTQERRRRRRKRGIGVPSGLNTSSSEEEEEEEEEDGDETLLIC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgccggttcctccaggtcgcctgggccagtccagctgtcagagcgatgagttcctgtgt
ggcaacggtaaatgtcttcctcggacgtggcgctgtaacggcctggatgagtgcggtgac
gccactgacgaacggggctgtgccccccctcccacccctccccgagcctccctctgcccc
gccgggaccgccccctgtacccaggcccagtccactcgctgcctgccccactcgctgcgc
tgcaacggagcccaggactgccccgacggctcggacgaagcagggtgccccgacacggcc
tgcgggaaacgcctggggaacttctacggaacgttcgcttcaccggacttcttccgtccc
aaccgcagcgccctcggggagctgagatgttcctggctattggacactcaggaccctaag
cccatcgtgttgcagctggacctggggttagggccaggggactccctccatgtctatgac
gggctggtccagagagcagagagcctcctgcgggccctgtctcatcataacaacaggaga
ccagccctgttagaatccagtagaggacagatgagtctacagtacctggcccaaccactc
agccctgggcacggattcaacgctacataccaggtgaaaggttactgtttccctcgggaa
cacccgtgtggaggggaccagggctgttactctgagcgccagcgctgtgacgggtactgg
cactgccctacggggcgcgacgaggaggagtgcccagtttgccaggagggggagtacccc
tgtgaggggggcagtggagcctgctaccctgcctctgaaagatgtaacaaccagaagaag
tgcccagacggttctgatgagaagaactgttttgactgccagccgggtaacttccactgt
ggtaccaacctgtgtatcttcgagacgtggcgctgtgatggccaggaggactgtctggac
ggtagtgatgagagagactgtttgggagctgtacccaggaaggtgattactgctgccctg
attggctctctggtctgtggcctcctccttgtcgtcgctctgggctgtgcctttaaactc
tactccctccggacaagagagtacagagcatttgagactcagatgacccttctggaggcg
gagtttgttcagagagaggctcctccctcctatggtcagctgatcgcccagggcctcatc
cctccggtggaggacttccctgtgtacaaccccactcaggcctccatgctccagaacatc
cgtacagcgatgcgtaggcagatcagaagacactcctcccgccgggccacgtcacaccgc
cgcctggggcgcctctggaaccgtctgttccaccgagggacccgtctccgcggccagatc
cccctactcacaccccccgggtctcaggtggctctgggcctgcactcctaccacacctcg
gagggacctggagccagggttgtggatggaggtggcgtggcgggcatggtggcgggcacg
ggaccagcaaggaccccctcccgctgctctacggcagcagtaggcctcgccctgcacgcc
cacaaccaggccctgccacagtcccacccttccttggagtctccctgctctccactctcc
ccctctgacagtgaaccatccgaggggtctctgtgttccccggagagccagggtagcagg
gttagattgcccctcagtgagctctccacccctgggcagcagagtgactcattaacgtct
gtccccagcatactgagccagcagtgccccccagagggtagcacaggtcattacacccgc
cgggcctccaggaagctggtcctgggactggctgccaacctgagaggggtggccctacga
cgctactcccccatggggctcacctcccccgttaccccccctgtccttccccctccagac
tcccagccgccctgccaccaccccctgacttcccctcagatgtcacccccctcggggtct
tcggacgacagtcagaggttccatgccctggaagtgccaacccaggagaggaggaggagg
aggaggaagaggggtataggggtgcctagtggactgaacaccagcagcagtgaggaggag
gaggaggaggaagaggaggatggagatgagactctgctgatctgctag
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