Salmo trutta (river trout): 115202666
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Entry
115202666 CDS
T08542
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115202666
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
stru04091
]
115202666
Lectins [BR:
stru04091
]
C-Type lectins
Lecticans
115202666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
115202666
NCBI-ProteinID:
XP_029622601
Ensembl:
ENSSTUG00000014003
LinkDB
All DBs
Position
12:91159964..91353548
Genome browser
AA seq
3009 aa
AA seq
DB search
MLLFYRFILVAASLSDSYGLSFPLRSELSEDAILVANNGIRVPFGRSVFIDPVNDLVIQT
QPGDRCSITVLDNQPLSQRPGHLSPKKFPCDFGPNDVTYSHFGSRSLAKDRVRLQLRYDT
PTETVIIPFMTEVEVVFTQMEVVTKNMPLTVAKLNGVSNAIDKKILEFTYDRNSEKCKVN
SLASGSPLPKYGRLVDDGLTKIMDCDEFIQSGIRYEHTFVRKSPNRDHVPMVVELCDKEG
NVIKEEYFQLTIRIKDGEANTPPKPSFMATLMMEVSQFVMTALTTDMLAAEDLESNPDEL
IFNITSPLSYEDGYIVSTDDRNLPITSFDQRDLRDLKIAYKPPSLDSDTERIFQIEFEVV
DPDVAVSDPFAFMIVVKPINSLAPVVTRNTGQLLYEGQSRPLFSTHNLEISDEDDLDGVT
VTVVDGLRHGDLTVLGSRRKYFTAADLNTGVVIYRHDGSDTYSDNIIFRMTDGKNQVEFL
FPLTIVPMDDEPPIINVNTGLVLFKNQIMAISPLMLSAADIDSEDSTIKFMIEPPFSTIG
GLLLRQSDAPEDPESWKFNAEDEVYEKEVTEWLQKDITDGKVFYKHTGLHNTDTVIDQFV
FKVHDDNDPPNESGESMFIIRVLPIDDIPPELFPGTTLQVTVQEYQLTHFGKNMLLYTDL
DSEDHDLKYTVIQPPTDTDENSPVVFGSIVLTESPDTEVNEFTQAQVNHHKISYSPPDQE
LGITAHVLQFRFSVEDTAGNSVEGAFRIFLQPVDNKPPQITNTGFSVFEQGMHVISSAEL
DASDPDTDSKQISFTLRQPPQHGQVLLAFSDLPKGGAFYLEDISDRKITYVQNGDQTVSD
VFQLDISDGIHVITVKVRVVMKPVDDEMPTVSLPAETVGSHMDVLENGAMEITTGVLKGW
DEDTDDLQLTFIIENAPVFGVILVAGAHAVKFTQADIINGLVVYAHTGGEIGLTSIKDSF
NLTLTDMSDDWSVGGNKVNSVHVGVTIIPVDNQAPEVTVGDQFIVVEGEKYAIGAQYLKA
EDKDTTSDDILCTIIVQPTSGYVENISPAPGSESSRSGTAVSAFYIRDIREGHVYYIQSI
HNGLEPVEDRFTFRCSDGINFSKRHFFPIVIIPANDEKPEIYLREIVVMEGMNIVIDTNL
LNGADTDIPAEELTFIISKLPKHGFILNQLATGSVPIINFTLEQIREASSFIYEHDDSET
TEDSFNVILTDGKYSVERTAMVMIIALDDETPRMLVNVGLEVEVGEAKEINNKVLKATDL
DSDDGALTYVIRFGPVQGVLQRKTPSGSLENIMLGMNFTQSDVDKRLIVYTHNGQEGIRD
LVRFDVTDGMNPLIDRYFYITIRSIDMVFPDVVSKGVFLKEGSRVTLTTDILSTSDLNSP
DECLVFTITRAPVRGHLECTDTPGIPIVSFTQLQLAGSKVYYIHTSDDEVKMDSFEFEVT
DGYNPVLRTFRVSIVDVDNKKPVLTVHGLVVTEGQSKLLTPFELTTEDQDTADRLLKFTI
TQPPVHGKLLHNHTTPVTIFTKQDLNENLISYKHDGTEISKDSFSFTVTDGTHTDFYVFP
DTVFETRRPQTMKITVVAIDNNVPQLVVNKGAPTLRTLSTGHLGFPMTSKVLRALDRDSV
PASLVFHVTTEPKHGYLINLGKGNDSIDTFSQADIDDLKICYVLRNEENATTDLFLFSVE
DNGGNKLKEQQFRLDWSWISLEREHYVVDEQDAFLEVVLKRRGYLGETSFIGIVTQNGSA
ENDQDFKGHSQKQVQFNPGQTRATWRVVILADGIFEQSETFRILLSEPVMGALEFPATAT
VEILDPSDESTVFIPQSSYWVKEDVGEMLVPVHRSGDISQELMVICYTQQGSATGTVPST
VLSYSDYISRPEEHGSILRFDKGETEKHCGVVVIDDSLYEVEESFNVTLSLPIGGCLGAH
YATTIVNIYPDQDDGGGNVFYTKNCLPLLGGGNVFYTNNCLPLLGGDNVFYTKNCLPLLG
GGNVFYTKNCLPLLGGGNVFYTKNCLPLLGGDNVFYTKNCLPLLGGGNVFYTKNCLPLLG
GGNVFYTKNCLPLLGGGNVFYTKNCLPLLGGESIIMFGETKFSVSEPKEAGSVSSVKIPV
LRLGDTSKLSVVRVHTKDGSATSGEDYHPVSEDVKFKHGQTEHVVEVEVLYDGIREMREA
FTVHLKPDDNMVAETQMTKAVVYIEETNGMADVTFPSLPHVVSLLHYDDVSKTAQNLHPP
AGYPIVCVTACNPKYPDYDKTGSICVSEHINNTMTRYRWLVSAPAGPDGVTTPMTEVDFD
TFFTSSKIITLDSVYFQAGSRVQCAARAVNSNKDEGLEVSSPIATVSLEEGMCQPRKVGT
VGAGPFSAKLRYTGTEDPDHPNLIKLTVTVPHIDGMLPVISTRPLSNMELSLSPDGTRVG
NHLCSNLLDYSEVTTGHGFITAESVGDTSPYQYSTPMRGDNTLRFYKNLNLEACLWGFTS
YYNMSELLTDCGGTIRTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGAGGWQHFDLQSELR
LTFVYDTAILWKDGIRSPPQAELQGALYPTSMRINEQGRLLVNFKTKARFRGLFVDAHSE
GRIKSTASSLSSMVMCEDNPGLTFNLSLVRSEPTYNQPVQQWTFTSDFAVRDYSGTYTVN
LIPCTTAQNMEYTVPPVCNPREPVTFHLNIRFQQVSEPVSVEFSLNTQIFLLSKRNLWLS
AGSMGFGQESDVAFSEGDTVYGLVMVDPVQNLGDSFFCSIEKVYLCTGADGYVPKYNPTN
FEFGCLAESPSLLYRFKILDKAQPETQARGFGDVDFNAMLAADDPSALSLVRQPGTDGFR
LDSTAMFQVAAGREWFIHTIYTIRSKDNANHGIGKTSLEYHHSLIATGNDLSITPGVKGQ
GHRVRRSASGLVGAVVPDVADDIGADNNRGTNIMHIVLDRTKRRAAGGVELYADRLEPRE
LSRGEREEGLPTVVGGLVEMLLTFLLIIILVLVVRYRQKEERKERVRGSASTEAMMVARM
DDCSNSSEV
NT seq
9030 nt
NT seq
+upstream
nt +downstream
nt
atgctactattttatagatttatcctcgttgccgcgtcgctctcagatagctacggatta
tctttcccgttgaggtcagaactgtctgaggacgcgatactggtggcaaataacggaata
cgcgtgcctttcgggagatccgttttcattgatcctgtcaatgatttggtgattcaaacg
caaccgggggaccgttgcagcatcaccgttctggataaccagccgctttcccagagaccc
gggcacctctctcccaaaaagtttccgtgtgatttcggtcccaacgacgtcacctactcc
cacttcggttcgaggagcctggctaaggacagagtgagactacagctcaggtacgatact
ccaaccgaaaccgttatcatcccattcatgacggaggtagaggtggtttttacgcaaatg
gaggttgtcaccaaaaacatgccgctgaccgttgccaaactgaacggcgttagtaatgcc
attgataaaaagattttggaattcacttatgacagaaactctgaaaaatgcaaggtgaat
tctttagcgagtggtagccctctccccaagtacggaagacttgtagatgatggactcact
aaaattatggactgtgatgaattcatccaatctggcatccgttacgagcacacgtttgtt
cgcaaatcccccaacagagaccatgtgcccatggttgttgaactatgtgataaagaggga
aacgtaataaaagaggagtattttcaactgacgatccgcatcaaggatggagaggcgaac
actcctcctaaacccagcttcatggcaacgctgatgatggaggtgagtcagtttgtgatg
acagctctgaccactgacatgctggctgcggaggaccttgagtcgaaccctgatgaactt
atcttcaacatcacctcccctctctcttatgaggatggttatatagttagtacggatgac
aggaacctacccatcacctcgtttgaccagagagacctacgggacctgaaaatagcctac
aagcctccctccctggactcagacacggagaggatctttcagatagagtttgaggtggtg
gatccggacgtggcggtctcggacccctttgcgttcatgattgtggtgaagccgattaac
tctctggcgccggtcgtgacgcggaatacgggtcagctgctttacgaaggtcagtcccgc
ccccttttctctacccacaacctggagattagtgacgaggacgacctggacggtgttacg
gtaaccgtcgtcgacgggctccgccacggtgacctcacagtcctggggtcgcgcaggaag
tacttcacggctgccgacctgaatacgggtgtagttatctaccgacacgatggcagcgac
acgtacagcgacaacatcatcttcagaatgacagatggcaagaaccaggtggagttcctg
tttcccttgacgattgttcccatggacgacgagcctcccatcatcaacgtcaacactggt
cttgtgctcttcaagaaccagattatggccatctctcctctgatgcttagcgccgctgac
atcgactcagaagattccacgatcaaattcatgatcgagccgccattctcgaccatcggg
gggttgctgctgaggcagtccgacgccccagaggaccccgagtcatggaagttcaacgct
gaggatgaggtgtatgagaaggaggtgacagagtggctgcagaaagacatcacagatggg
aaggtgttctataaacacaccggactacataacactgacacagtcatagaccagtttgtg
ttcaaagtccatgacgacaatgacccgcctaacgaatcgggcgagagcatgttcatcatc
agggttctacccatcgacgacattccccctgagctttttcccggtaccacgctccaagtg
actgttcaggagtaccagctgactcatttcggtaagaacatgcttctctacactgatcta
gactctgaggaccatgacctgaaatatacagtgatccagccaccaacagacacagacgag
aacagcccggtggtgttcgggtccattgttctgaccgagagccccgacactgaggtcaac
gagttcacgcaggctcaggtcaaccaccataagatatcctacagtcctcccgaccaggag
ctgggcatcacggctcacgtcctccagttccggttctccgtcgaagacacggccgggaat
agcgtcgagggggctttcaggattttcctccagccagttgacaacaaaccaccacagatc
actaacactggcttttctgtgtttgagcaaggcatgcatgtgatatccagtgctgagttg
gacgcatcagacccagacacagacagtaaacagatatcgtttaccctcagacagcctccg
cagcacggccaagtcctgcttgccttctcagacctacccaaagggggagctttctaccta
gaggacatctcggacaggaagatcacatacgtccaaaacggcgaccagacagtgagcgac
gtgttccaactcgacatcagcgatggaatccacgtcatcacggttaaagtcagagtcgtc
atgaagcctgtagacgacgagatgccgactgtcagtttacctgccgagacggtcggttct
cacatggacgtcctagagaatggagctatggagatcaccacgggcgtcctcaaggggtgg
gacgaggacaccgacgacctccagctgaccttcatcatcgagaacgcgcccgtgtttggt
gtcatccttgttgccggggcgcatgccgtgaagttcacccaagccgacatcatcaacggt
ttagtggtgtacgcccacaccggcggagagattggcctgacatccatcaaggacagcttc
aacctcaccctaactgacatgtcagatgattggtcagtgggcgggaacaaggtcaacagt
gtccacgtcggcgtcacaatcatccccgttgacaaccaggcccccgaggtaaccgtgggt
gaccagttcatcgttgtcgaaggagagaagtatgccatcggagcacagtatttaaaggcc
gaagacaaagacacaaccagtgatgatattctctgcaccatcatcgtccagcccacgtct
ggttatgtggagaacatctccccagctcctggatcagagagttcacggtcagggacggca
gtcagcgccttctacatcagagacatcagagaaggacatgtatattacattcagagtatc
cacaatgggttagaacccgtagaggacaggttcacatttagatgctccgacggtatcaac
ttctcaaaaaggcatttcttccctattgtgattattccggctaatgatgaaaagccagag
atttacttgagggagatagttgtgatggaggggatgaatatagtcatagacactaatctc
ctgaacggagcagacactgatatcccagctgaggagctgactttcatcatctctaaactg
cccaaacacggcttcatcctcaaccagctagccacaggctcagtcccaatcataaacttc
accttagagcagatcagggaagcttccagtttcatctacgaacatgacgactctgagacc
accgaggacagcttcaacgttattctaacagacgggaaatattcggtagagagaaccgcc
atggttatgatcatcgccctcgacgacgagacaccgagaatgctggttaatgtcggtctg
gaggtggaagtaggtgaggcaaaagagatcaacaacaaggtcctcaaagccaccgatcta
gactcggacgatggagcgttgacctatgtgatccgcttcggtcctgttcagggtgttctt
cagaggaaaaccccatctggttctctggagaacatcatgttaggcatgaatttcacacag
agtgatgtggacaaaaggttgatcgtttacacacacaatggtcaggaaggcatccgtgac
ctggtcaggttcgacgtcaccgacggcatgaaccctctgatcgatcgttacttctacatc
accatcaggagcatcgacatggtcttcccagacgtggtcagcaagggagtctttctgaag
gaaggcagtagagtgacattgaccacagatattctcagtactagcgatctcaacagtcca
gatgaatgtctggtgttcaccatcaccagagctccagttagaggacacctggagtgtact
gatacaccagggatccccatcgtgtcattcacccaactccagctggctggcagtaaagtc
tactacatccatacctcggacgacgaagtcaagatggacagtttcgagtttgaggtaacc
gacggttacaacccggtgttacgtacgttccgagtctctatcgtggatgtggataacaag
aaaccagttttaacggttcacggactcgtggtcaccgaggggcagagtaaactcctcacg
ccattcgagctgaccacagaggaccaggacacagctgaccggttgttgaagttcaccatc
acccaaccaccggtgcacggcaaactcctccataaccacaccacaccggtcaccatcttc
accaagcaagacctcaacgagaacctcatcagctacaaacacgatggcaccgagatctcc
aaagactccttctcatttactgtgactgacgggacgcacactgacttctacgtgttcccc
gacacggtgttcgagacacggcgcccacagacgatgaagatcacggtggtggccatagat
aacaatgtcccccagctggtggtgaataagggcgccccgacactgaggaccctgtccacg
gggcacctggggttccccatgacctccaaagttctacgggcgttagacagggacagcgtt
ccggcttccttagtattccacgtcaccacagaacccaagcatggttacctcatcaacctg
ggcaaagggaacgactccatcgacaccttcagtcaagctgacattgatgacctgaagatc
tgctatgtgttaagaaacgaggagaacgcaaccacagacctcttcctcttctctgttgaa
gacaacggtggaaacaagctgaaggaacagcagttccgtctggactggtcctggatctct
ctggagagagagcactacgttgtggacgagcaggacgcgttcctggaggtggtcctcaaa
cgacgagggtatctgggagaaacctccttcataggtattgttacccagaacggcagtgcg
gagaatgaccaggactttaagggtcactcccagaagcaggtacagtttaaccctggccag
acgcgggccacatggcgtgttgtgatccttgccgatgggatctttgaacagtctgaaacc
ttccggatccttctgtctgagcccgttatgggagcactggaattccctgccaccgccacg
gtggaaatactggacccttccgacgagtccacagtgttcatccctcagtccagttactgg
gtaaaggaggatgttggagagatgctggtacctgtccacaggagtggagacatcagccag
gaactcatggtgatctgctatactcagcagggttcagccactggtaccgtcccctctaca
gtcctgtcctactctgactatatttccaggccagaggagcacggcagcatcctgcgcttc
gacaagggagagacggagaaacattgtggcgtagtcgtcatcgacgactccctgtacgag
gtggaggagagcttcaacgtaacgctatccctgcccatcggagggtgcctcggtgcacac
tacgccaccactatagtcaacatatatccagaccaagatgatggaggaggcaatgtcttc
tacacaaagaactgcttgcccctcctaggaggaggcaatgtcttctacacaaataactgt
ttgcccctcctaggaggagacaatgtcttctacacaaagaactgcttgcccctcctagga
ggaggcaatgtcttctacacaaagaactgcttgcccctcctaggaggaggcaatgtcttc
tacacaaagaactgtttgcccctcctaggaggagacaatgtcttctacacaaagaactgc
ttgcccctcctaggaggaggcaatgtcttctacacaaagaactgcttgcccctcctagga
ggaggcaatgtcttctacacgaagaactgcttgcccctcctaggaggaggcaatgtcttc
tacacgaagaactgcttgcccctcctagggggagagtctatcatcatgtttggagagacc
aagttcagtgtgagtgagcccaaggaggcaggctctgtttcctcggtgaagattccagtg
ctgcgattgggcgacacctccaagttgtcagtggtccgtgttcacaccaaggacgggtca
gctacctcaggagaggactaccatcctgtctcagaggatgttaagtttaagcatgggcag
acggagcacgttgtagaggtggaggtgttgtatgatggaatcagagagatgagagaagcc
ttcaccgttcacctgaaacctgacgacaacatggtggccgaaacgcagatgactaaggcc
gtcgtgtacattgaggagaccaacggtatggccgacgtcaccttcccctccctgcctcac
gtggtgtcactgctgcactatgacgacgtgagcaagacggctcagaacctccaccctcct
gctggctaccccattgtctgtgtcaccgcctgtaaccctaagtaccctgactacgacaag
acaggctccatctgtgtcagcgagcacatcaacaacacgatgacacgctaccgctggctc
gtcagtgcccctgctggcccggatggggtcactacacccatgacagaggtggactttgat
accttcttcacctcctccaagatcatcaccctggactctgtctacttccaggccggctcc
agggtgcagtgtgctgccagggccgtcaactctaacaaagacgagggactggaggtcagc
agtcccatagctactgttagtctggaggaaggtatgtgccagcctcgtaaggtgggcacg
gtgggcgctgggcccttctctgccaagctacgctacaccggcacagaggacccagaccac
cccaacctcattaaactcactgttaccgtgccacacatcgatggcatgctaccggtcatc
tcaacccgtcctctatctaacatggagctcagcctcagccctgacggtacgcgtgttgga
aaccacctctgctccaacctgctggactacagcgaggtcaccacgggtcacgggtttatc
accgcggagagtgtgggcgacacctccccctaccagtacagcaccccaatgcggggggac
aacacattgcgtttctataagaacctcaacctagaggcctgtctatgggggttcaccagc
tattataacatgtctgaactactcaccgactgtggagggaccatcaggacagacggacag
gtgctgaatctggtccaatcgtacgttactctgcgtgttccactttacgtgtcatacgtg
ttccactccccggtgggtgcggggggctggcagcattttgacctgcagtctgagctccgc
ctcacctttgtgtacgatactgctatactgtggaaggacggcatcaggagcccaccgcag
gctgagttacagggtgccctgtaccccaccagtatgcgtatcaacgagcagggtcgtctg
ctggtcaacttcaaaaccaaggctcgcttcagaggtctgtttgtagatgcccactctgaa
ggcaggatcaagagcacagcatcctctctgtcatccatggtgatgtgtgaagacaaccct
ggcctgacctttaacctcagcctggtgaggagtgaacccacctacaaccagccagtccag
cagtggacattcacatcagactttgctgtgcgagactattctggtacatacacagtgaat
ctgattccctgtactacagcccagaacatggagtacactgtcccccctgtctgtaacccc
agagagcctgtcaccttccacttgaacatacgcttccaacaggtcagtgaaccagtatca
gtagagttcagtctcaacactcagatattcctgctgtccaagaggaacctatggctgtct
gccggatccatgggcttcggacaggagagcgacgtggccttctcagagggtgatactgtc
tacggtcttgtgatggtggaccctgttcagaacctgggggactctttcttctgcagcata
gagaaggtgtacctgtgcaccggcgcggatggatacgtgcccaagtacaaccctactaac
tttgagtttggatgtctggctgaatctccctctctactctaccgcttcaagatcttagac
aaggcccagcccgagactcaggcccgtgggtttggtgatgtggattttaatgcaatgttg
gctgcagacgacccctcagctctctctctggtcagacagcctgggacagacggattcaga
ctggactctacggccatgttccaggtggctgcgggtcgtgagtggttcatccacaccatc
tacaccatccgctccaaagacaacgccaaccacggcatcggcaagacaagcctcgagtac
caccactccctgatcgccacgggcaacgacctctccattacccccggggtcaaaggtcaa
ggtcaccgtgtgaggaggtcagccagtggattggtcggagcggtggtccccgacgtggcc
gatgacattggagcagacaacaaccgtggcaccaacatcatgcacatcgtcctggaccgt
accaagaggagagcggcagggggggtggagctgtacgccgaccgtctggaaccaagggag
ctgagcaggggggagagggaggaggggttgccgacggtggtgggggggctggtggaaatg
ctgctcaccttcctcctcatcatcatcctcgtcctggtggtccggtacagacagaaggag
gagaggaaagagagggtgagggggtcggcgagcacggaagcgatgatggtggcgaggatg
gacgactgcagcaacagctcagaggtctaa
DBGET
integrated database retrieval system
