Salmo trutta (river trout): 115202825
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Entry
115202825 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 4-like
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115202825
Membrane trafficking [BR:
stru04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
115202825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
EGF_LRP2
EGF_CA
UPF0113
Motif
Other DBs
NCBI-GeneID:
115202825
NCBI-ProteinID:
XP_029622736
Ensembl:
ENSSTUG00000006733
LinkDB
All DBs
Position
12:complement(4708280..4942089)
Genome browser
AA seq
1899 aa
AA seq
DB search
MQVSVVLCSMITFFLRSQGVLGSAECSCGRNHFTCAVSAFGECTCIPAQWQCDGDNDCGD
HSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFHCQN
GYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCTDGSCIAEHWYCDGDTDCKDGSDE
ENCPSDVMTATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSVEFMCS
SGMCINAGWRCDGEFDCDDQSDEKNCTTSMCTADQFRCASGRCVRLSWRCDGEDDCSDGS
DEDDCEKTDTPPCAPDQFLCGNGRCIGQRKVCNEVSDCGDGTDEHPHQDCRPRSSEGNCN
LNNGGCSQKCQMARGLVQCTCHTGYRLMEDGRACQDVDECAEEGYCSQGCTNTEGGFQCW
CVQGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHNQ
ELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVAN
LDGTHRKVLLWQSMEKPRAIALHPIEGKIYWTDWGNTPRIEYANMDGSNRCIIADTHLFW
PNGLTIDYAGHRMYWVDAKHHVIERADLDGRNRKAVISQGLPHPFAITVFEDSLYWTDWH
TKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGGRNRCGTNNGGCSHLCLPGNK
TYTCDCPTGFKKVDQHNCALSLDKFLLFARRTDIRRISFDTEDMSDDVIPLANVRNAVAL
DWHAEEGFIYWTDVTTDSINRAQWDGSRQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTD
RIEVSNADGSMRTVLIWENLDRPRDIVVDPIGGYMYWTDWGVSPKIEQAGMDASSRIVII
SSNLTWPNGLAIDYQTQRLYWADAGMKTIEFGNFDGSDRQVLIGSQLPHPFGLTLHEEKL
YWTDWQSKSIQSANKMTGLGRQTLAENLENLMDIHMFHRYRTTVRTPCAVNNGGCSHLCL
LAPPPKGSSCACPTGINLQLDGKTCAHGMSSFLIFARRTDIRMVSLDIPYFSDVVLAVNG
SMKNTIAIGVDPKEGKVYWSDSTLKKVSRANINGTAHEDIITTGLITTDGLAVDVVGRKI
YWTDTGTNRIEVANLDGSMRKVLIWQNLDSPRAIALYHEMGYMYWTDWGEHAKLERSAMD
GLDRLVLISNNLGWPNGLAIDSAGSQVLWADAHTERIEAADLNGLNRRTLVSPVQHPYGL
TLLGPHIYWTDWQSRSIQRADKTTGANTITVRSNLPGLMDIQAVDREKPLGFNKCGRRNG
GCSHMCLPRPNGTSCACPTGILLKADARSCDDSPETYLLFSNRVSVRRISLDTDDHTDVH
VPMPELHNVISLDYDSVDGKLYYTDVSLDVIRRANLDGTGMETVISQGLKTTDGLAVDWV
TRNMYWTDTGRNTIEVARLDGTSRKVLVNNSLDEPRAIAVFPSKGYLFWTDWGHIAKIER
AHLDGSDRKVLINTDLGWPNGLTLDYDTHRIFWVDAHLDRIESSDLNGKLRQILVSPVSH
PFALTQQDRWIYWTDWQTKSIQRVDKHTGRSKETVLANVEGLMDIIVVSPQRQSGTNHCG
VNNGGCTHLCFAKTNSFVCACPDEPDSRPCSTISGYVPTSPDRETTSTAAPNKIPKAPTD
TPQQGPPLINCTDKSLSVEGCLQSNVVTAPHGEGLHISYVIGGALTILAILIIITAFIIY
RHKMSKFADPGMRNLTYSNPSYRTSTQEVKIETSQKPPIYNQLRYKKEGDWDSGYTKEKI
RIVEGVCLLSNEELYWEDLKQLKPSRGGLHTCMHTDTVSLQASSASLDDGETEQLLQEET
SECSSINTLTPAIITPQRHRTQPDTGWTPARKPSTESEV
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtctctgtggtgctgtgtagcatgataactttcttccttcgcagtcaaggtgtg
ttgggcagtgcggagtgttcatgcgggcgcaaccacttcacatgtgcagtgagcgctttt
ggggagtgtacatgtatcccggcccagtggcagtgtgacggggacaacgactgtggagat
cacagtgacgaggatgggtgcatgctgcccacctgctctccactggacttccactgtgac
aacgggaagtgtatccgccgctcctgggtgtgtgacggtgacaacgactgtgaggatgac
tccgacgagcaggactgtcctcctagagagtgtgaagaggatgagttccattgtcagaac
ggctactgcatccgcagtctgtggcactgtgatggggacaatgactgtggtgataacagt
gacgagcagtgtgacatgcgaaagtgttccgataaggagtttcgctgtacagatgggagc
tgcattgctgaacactggtactgtgatggagatactgactgcaaggacggatcagatgag
gaaaactgcccatctgatgtaatgacggccacctgtagtgttgaagagttccagtgtgcg
tatggacgctgtattctggacatttaccactgtgacggagacgatgattgcggagactgg
tctgatgagtccgactgctcctcccaccagccttgtcgttctgtggagttcatgtgcagc
agtgggatgtgcatcaacgctggttggaggtgtgacggggagtttgactgtgatgaccaa
tcagatgagaagaactgcaccacctccatgtgtactgcggatcagttccgctgtgcatcg
ggacgctgtgtcaggttgtcatggagatgtgatggtgaggatgactgctctgatggcagc
gatgaagatgactgtgagaagactgacacccctccatgtgctccagaccaattcctgtgt
ggtaacggccgatgtattggtcagaggaaggtctgtaatgaggtcagcgactgtggagat
gggacggacgaacaccctcaccaggactgccgcccacggtccagcgagggcaactgtaac
ctgaataacggaggttgttctcagaagtgtcagatggctagaggtctggtccagtgtacc
tgtcatactggctacagactgatggaggatggcagggcctgccaggatgtggatgagtgt
gcagaggagggttactgcagccagggctgtaccaacacagagggggggttccagtgctgg
tgtgtgcagggctacgagctgaggcctgacaagcgcagctgcaaggctctgggtcctgag
ccagtgctgctgttcgctaatcgtatagacatccgccaggtgttgccccaccggtcagag
tacactctgctgctgaacaacctggaaaatgccatcgctctggacttccaccacaaccag
gagctggtcttctggtccgacgtcacacttgaccgcatcatgaaggccaacctgaacggg
agcaacgtggaggaagtggtttccactggcttagagagtccaggtggtctggctatagac
tggatccatgacaagctatactggactgactcagggacgtcccgtattgaggtggccaat
ctggatggaacccaccgcaaggtcctcctatggcagagcatggagaaacccagagccatc
gcactgcaccctatagagggcaagatctactggacggactggggtaacactcctcgtatc
gagtatgccaacatggacggctccaaccgctgcatcatcgccgacacacacttgttctgg
cccaacgggctgaccatcgactacgccgggcaccgcatgtactgggtggacgccaagcat
cacgtcatcgaaagagctgacctggatggacggaaccgtaaagccgtcatcagccaaggc
ttgccccatccatttgccataacagtatttgaggatagcctatactggacagactggcac
accaagagcatcaacagtgccaacaagttcacgggcaagaaccaggagatcatcagaaac
aagctgcacttccccatggatatacacacactgcacccgcagagacagcccgcaggtggg
cgtaaccgatgtgggaccaacaacgggggctgcagccacctctgtctccctggcaacaag
acctatacctgcgactgccccacgggcttcaagaaagtggaccagcataactgtgccctg
agtcttgacaagttcctgctttttgcccgaaggacggacatccgacgaatcagcttcgac
accgaggacatgtcggatgacgtcataccgctggccaacgtacgcaacgccgtggcactg
gactggcacgccgaggagggcttcatctactggactgacgtcaccaccgactccatcaac
cgggcccagtgggacggctcaaggcaggaggtggtggtggacaccagtctggaaagtcca
gccggtctggctattgactgggtgaccaacaaactctactggaccgatgcaggtacagat
cgtatcgaggtatctaatgcagacgggagcatgcgtaccgtcctgatctgggagaatctg
gaccgacccagggacattgtggttgacccaattggaggatacatgtactggacagactgg
ggtgtgagtcctaagatagagcaggcagggatggacgcatccagccgtattgtcatcatc
tcttccaacctgacgtggcctaacggactggcaattgactaccaaacacagcgcctgtac
tgggccgacgcagggatgaagaccatcgagtttggcaactttgacggctcagacagacag
gtgttaattggcagtcagttgccccacccctttgggctgactctgcatgaggagaagctc
tattggacagactggcagtccaagagcatccagagtgccaacaaaatgactggcctggga
cgacagacactcgccgagaacctggagaacctcatggatattcacatgttccatcgctac
cgcaccaccgtgcggaccccctgtgcggtgaataatgggggctgcagtcacctgtgtctg
ttggccccaccccctaaaggctccagctgtgcctgtcctactggcatcaaccttcagctg
gatggaaagacctgcgcacacgggatgagtagtttcctgatctttgcacggcgtaccgat
atcaggatggtctctctggacatcccctacttttctgatgtggtgctggctgtcaacgga
tccatgaaaaacaccatcgccatcggggtagaccccaaagagggtaaagtgtactggtca
gacagcacactaaagaaggtgagtagagctaacatcaatgggacggctcatgaggatatc
atcactacaggtctgataactactgatggtctggcggtggatgtggtgggtcgaaagatc
tactggactgacaccggaacaaaccggatcgaggtggccaacctggacggctccatgagg
aaggttctgatctggcagaacctggacagcccacgagcgatcgccctttaccacgagatg
gggtatatgtactggacagactggggggaacatgctaagttggagcggtcagcgatggat
ggcttggaccgtttggttctgatcagtaacaacctaggctggcctaacggactggccatc
gacagtgccggctcacaagtactgtgggccgacgctcacacagagcgcatcgaggcggca
gacctgaacgggctgaaccgccgtaccctggtatccccagtccagcacccgtatggtctg
accctactaggaccacacatctattggaccgactggcagagccgtagcatccagcgggct
gacaaaaccaccggcgccaacaccatcactgtacgcagcaacctgcccgggctcatggac
atacaggccgtggatagagaaaagccactgggtttcaataagtgtggtagaaggaatggg
ggctgtagccacatgtgtctgccccgccccaacggtacttcctgtgcctgtcccaccggc
atcctcctcaaggcggatgccaggtcatgtgacgactcccccgagacctacctgctcttc
tccaaccgggtcagcgtgcgacgcatctccttggacacagatgaccacacggacgtgcat
gtgcccatgcccgagctgcacaacgtcatctcactggactacgacagcgtggatgggaag
ctgtactacaccgatgtcagcctggatgttatcagacgggccaacctggatggtacaggg
atggagacagtgataagccagggtctgaagaccactgatggtctagctgtggactgggtg
accaggaatatgtactggacggacacaggtcgcaacaccatcgaggtggcacgactggac
gggaccagccgcaaagtactagtcaacaacagcctggatgaacccagggccatcgctgtg
tttcccagcaaagggtacctgttctggacagactggggtcacattgctaagattgagcgg
gcacacctagatggatcagaccgtaaagttctgattaacacagacctgggctggcccaac
ggactcacactggattacgacacacacaggatcttctgggtggatgctcacttggaccgc
attgagagttccgacctaaacggaaagctccgtcaaatcctcgtcagccctgtgtcccac
cccttcgccctcacacagcaagaccgttggatctactggacggactggcagactaagtcc
atccagcgtgtggacaaacacactggccgcagcaaggagaccgtgctggccaacgtggag
ggcctcatggacatcatcgtagtctcaccacagaggcagagcggcactaaccactgtgga
gtgaataatggaggatgcactcatctctgcttcgctaagacaaacagctttgtgtgtgcc
tgccctgatgaaccagacagcaggccctgctccaccatctcaggttatgtgcccacctca
ccagacagagagaccaccagcaccgcagcccccaacaagatccccaaagcccccacagac
acgcctcagcaaggacccccactgatcaactgcacagacaagagcctaagtgtggagggc
tgcttacagagcaacgtggtgacagctcctcacggggaggggcttcatatcagctatgtg
attggaggagcattaaccattcttgccatcctgataatcatcactgccttcattatttac
agacacaaaatgtcaaagtttgctgaccccgggatgaggaacctgacctacagtaacccc
tcatacaggacgtcaacgcaagaggtcaagatcgagacctctcaaaagccgcccatttac
aaccagctacgatataagaaagagggggactgggacagcggctacaccaaggagaagatc
cggatcgtggagggagtgtgtctcctctccaacgaggagctgtactgggaggacctgaag
cagctgaagccgtcgcggggtggtctgcatacgtgcatgcacacggacaccgtgtccctg
caggccagcagcgcctcactggacgacggcgagacagagcagttgctccaagaggagacg
tcggagtgctcgtccataaacacgctgacccccgccatcatcacaccccaacgccaccga
acacagcctgacaccggctggacccccgcgcgcaaaccctccaccgagagcgaggtgtaa
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integrated database retrieval system
