Salmo trutta (river trout): 115202826
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Entry
115202826 CDS
T08542
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
stru
Salmo trutta (river trout)
Pathway
stru04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115202826
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115202826
Transporters [BR:
stru02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115202826
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Gene cluster
GFIT
Motif
Pfam:
SNF
PIRT
Motif
Other DBs
NCBI-GeneID:
115202826
NCBI-ProteinID:
XP_029622737
Ensembl:
ENSSTUG00000010531
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Position
12:complement(5648712..5703176)
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AA seq
780 aa
AA seq
DB search
MLQDFSDQREMTKQPANAPTGFKPLHQPEGAVGVSANKPYNALNQTSAAYPAPQPAPSNE
SKTFCPTENNPGEVSKVYGTFKNAALPVPGSVAANSAFREDSTSSVGGSAARVAPVQCVD
PLRATGDQNNASGNWTTMSQTTIILGADGNTSVQPGAVTGEDESGDENKARGNWTNKLDF
ILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLIMLCLAGIPIFLLEVSLGQFASQGPV
SVWKAIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCKNEWNTLDC
KDKDMLLLDTCILHDKNITSVKNSSFCLSAQAIGNLTKLVNMTYPDNKTYVSPSEEYFKY
NVLHISKGIEYPGDIRWPLAGCLLLAWLIVYLSLAKGIKSSGKVVYFTATFPYVVLVILL
FRGVTLPGAGDGILYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNN
CYRDTIIVCIVNSATSIFAGFVIFSVIGFMAHELKVPIEKVADEGPGIAFVVYPEALTRL
PLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPQYLRKNKPLFTLICCACFFFLG
FPMVTENGMYMLQLVDTYAASYSLVIIAICELIGISYFYGLQRFCEDIEMMIGFQPNRFW
RICWAFVTPTILTGILGLSLYQWKVMTYEDYTYPPWSMVMGWLMVVCSVIWIPIMFVIKM
YLAPGSFMERLKLVCSPQPDWGPFLAKHRGERYKNMMDPHGSNSLGLKLPPKDFQLGTYQ
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaggatttctccgaccagagagagatgaccaaacagccggccaatgctcctacc
ggttttaaaccgttgcaccagccggagggagcggtgggagtttcagcaaacaaaccgtat
aatgcccttaaccaaacgtccgccgcttacccggcccctcagccagcaccatccaacgag
agcaaaactttctgtcccacggaaaataacccgggagaagtcagtaaagtctatggaaca
tttaaaaatgccgctctgccggtgcctggatccgtggctgcgaactcggccttccgtgag
gattccaccagctcagttggtggttctgctgcccgggttgcccctgtccagtgcgtggac
ccgcttagggctaccggggatcaaaacaatgcatcgggcaactggaccaccatgagtcag
accaccatcattctgggcgcagatggcaacacgtctgttcagcccggcgccgtgacaggg
gaggacgagagtggagatgagaataaggccaggggaaactggactaataaattggatttc
atcctgtccatggttggttatgccgtgggactgggaaacgtgtggaggtttccatacctt
gccttccaaaatggtggaggtgcttttttgatcccctacctgataatgttgtgcctcgcc
gggatccctatctttttattggaggtttccctgggtcagtttgccagccagggccccgtg
tccgtgtggaaagccatcccggctctgcaaggttgcgggattgccatgttgataatatct
gtcttgatagccatatactataacattattatgtgctggacactgtactacctgttcgct
tcgttgaagggctcactgccatgggctaactgtaagaacgagtggaacacgttggactgt
aaggacaaagacatgcttctcttagacacgtgtatcctccatgacaaaaacatcacctct
gtaaagaacagctcgttctgtctgtcggctcaagccattggaaacctgaccaaactggtt
aacatgacctatccagataacaaaacttacgtcagccccagcgaggagtacttcaagtac
aatgtcttgcacatctccaaagggatagagtaccctggagacatccgctggcccctcgca
ggctgcttgctgctggcctggttgatagtctacctctccctggccaaaggaatcaagtca
tcagggaaagtggtgtatttcacagctacgttcccctatgtggttctggtcattctgttg
ttcagaggagtgaccctcccaggggctggtgacggcatcctctacttcatcacacccaag
tgggagaaactcaatgatgctaaggtgtggaaggatgctgccacccagatcttcttctct
ctgtcagcagcctggggaggcctcatcacactgtcttcttacaacaagttccacaacaac
tgctacagggacaccatcatagtgtgcatagttaacagtgccaccagtatattcgctggg
ttcgtcatcttctccgtcattggattcatggcccatgaactgaaggtgcccattgagaag
gtggcagatgaaggtccaggcatagcatttgtggtgtaccctgaggctctgaccagactt
ccactctctccgttctgggccatcatattcttcctcatgctgctgaccctcggcttggat
accatgtttgccaccattgagaccatagtgacgtcggtgtcagatgagttcccccagtat
ctgagaaagaacaagcctctgttcacactcatctgctgtgcctgtttcttcttcctggga
ttccctatggtcacagagaatgggatgtacatgctccagttggtggacacgtatgctgcc
tcttactctctggtcatcattgcgatctgtgagctaatcggaatctcctacttctatggc
ctgcagaggttctgcgaggacattgaaatgatgattggcttccaaccaaaccgcttctgg
agaatctgctgggcctttgtgactccaaccattctgactggtatcctggggctgagtctg
taccagtggaaggtgatgacctatgaggactacacctaccccccctggtccatggtgatg
ggatggctgatggtggtgtgttctgtcatctggatcccaatcatgtttgtcatcaaaatg
tacttggccccaggcagcttcatggagcgtctgaagctggtgtgctcccctcagcccgac
tggggtcccttcctggcaaagcacagaggggagcgctacaagaacatgatggatccccat
ggatccaactccctgggcctcaaactgccccccaaagatttccagctgggcacctaccag
tag
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