Salmo trutta (river trout): 115202903
Help
Entry
115202903 CDS
T08542
Name
(RefSeq) cytoplasmic dynein 1 light intermediate chain 2-like isoform X1
KO
K10416
dynein cytoplasmic 1 light intermediate chain
Organism
stru
Salmo trutta (river trout)
Pathway
stru04145
Phagosome
stru04814
Motor proteins
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115202903
09142 Cell motility
04814 Motor proteins
115202903
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115202903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115202903
03036 Chromosome and associated proteins [BR:
stru03036
]
115202903
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115202903
Membrane trafficking [BR:
stru04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
115202903
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
115202903
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
115202903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DLIC
ABC_tran
Arf
AAA_22
AAA_16
SRP54
SAP130_C
AAA_29
AAA_7
Roc
ATPase
PduV-EutP
AAA_24
G-alpha
nSTAND3
AAA_14
Motif
Other DBs
NCBI-GeneID:
115202903
NCBI-ProteinID:
XP_029622925
Ensembl:
ENSSTUG00000013802
LinkDB
All DBs
Position
12:9814729..9831622
Genome browser
AA seq
494 aa
AA seq
DB search
MAPVLEKKYLGAAGAGDTMENSNEDEEGQNLWTSILSEVSTRSSSKLPSGKNILVFGEDG
SGKTTIMAKLQGAEHNKKGRGLEYLYLNVHDEDIDDLTRCNVWILDGDLYHKGLLKFAVT
AESLNDSLAVFVADMSRPWTIMESLQKWASVLRDHVDKLKIPPEEMREMEQRMVKAFQEY
TEPEGADPASPQRRAPPAGGDDEGVVLPLGENVLTHNLGIPVLIVCTKCDAVSVLEKEHD
FREEHFDFIQSHIRQFCLQYGAALIYTSVKEEKNLDLLYKYIVHKIYDFQFTTPALVVEK
DAILIPSGWDNEKKIAILHENFTTVRPEDPFEDFIMKPPVRKLVHDKEVNAEDEQVFLMK
QQSLLAKQPATPTRGSTESPGRTASGSPRPTGRTGPTNVASVSPMTAVKKPDPNMKGAAA
NEGVLANFFNSLLSKKTGSPGSPGTGAAGAGSPGSVKKTGQKPVLTDVQAELDRMTRKPD
SMVTANNTPTENEA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgttctggagaagaagtacctgggcgcagccggggcaggcgacactatggaa
aatagcaacgaagacgaggaaggtcaaaacctatggacttcaattctcagtgaggtttca
acacgttcaagttctaagttgccatctgggaagaacatattggtgtttggtgaggatggg
tcaggaaaaacaacgattatggcaaaactccaaggagcagagcacaataagaaaggaaga
ggcctagagtatctgtatctgaatgtccacgatgaggacatagatgaccttacacgctgt
aacgtgtggatcctggatggggacttgtatcacaaaggcctgctaaagtttgcagtgaca
gcagagtcgctgaacgacagcttggcagtatttgtggcagacatgtcaagaccctggacc
atcatggagtcgctccagaagtgggccagcgtgctgcgtgatcatgtggacaagctcaag
atcccgccggaggagatgagagagatggagcagaggatggtgaaggctttccaggaatac
acagagccggagggagccgacccagcctctccccagagacgggctcccccagcagggggg
gatgacgagggtgtggtgctaccgctcggggaaaatgtactcacacacaacctgggcatt
ccagtgctaatagtttgcacaaagtgtgatgcagtcagtgttttagagaaggaacacgac
ttcagagaggagcacttcgacttcatccagtcccacatccgacaattctgcttacagtat
ggagctgcattgatttacacctctgtcaaagaggagaagaacttggacctcttatataaa
tacatagtgcacaaaatatacgacttccagttcaccacgcctgccttagtggtggagaag
gatgctattttgattccatctggatgggacaatgagaagaagattgcaattctgcatgaa
aatttcacaacagtgagacctgaagacccctttgaagacttcatcatgaagcctccagta
cggaagctggttcatgataaggaggtcaacgcggaggacgagcaggtgttccttatgaag
caacagtctttgctggccaagcagccggccacaccaacaagaggatcgacagaatctcct
ggacggactgcttctggctcgcctcgacccactggccgtacaggtcctaccaatgtggcc
agcgtctcgccaatgaccgcggtcaagaaacctgaccccaacatgaagggagcagcagca
aacgagggagtgctggccaacttctttaacagccttttgagtaaaaagactgggtcccct
gggagtccaggaaccggagctgcaggagcaggatctccaggatcagtcaagaaaacaggg
cagaagccggttttgactgacgtccaggcagagttggatagaatgactcgcaaaccggac
tccatggttacagctaacaacacaccgacagagaacgaagcgtga
DBGET
integrated database retrieval system
