Salmo trutta (river trout): 115202911
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Entry
115202911 CDS
T08542
Name
(RefSeq) cadherin-5-like
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecules
stru04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115202911
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115202911
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115202911
04090 CD molecules [BR:
stru04090
]
115202911
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Major cadherins
115202911
CD molecules [BR:
stru04090
]
Proteins
115202911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
115202911
NCBI-ProteinID:
XP_029622938
Ensembl:
ENSSTUG00000014068
UniProt:
A0A673YEJ5
LinkDB
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Position
12:complement(9948092..9960786)
Genome browser
AA seq
765 aa
AA seq
DB search
MMKQSAWRQMTGPEMWMGLFALALTLSLTMAEHMDQREALQTSPVLHRHKREWLWNNLYV
EEERPTDKQYYLGKLKSTKSGDRTHYVIEGDGANTIFKVDEKGHIYVAERLDREVKSKYH
LRAKLFDTSNNLVEKVEEFVILVTDINDNDPVFTKSFNASIKERSKRGTKVIEVTATDAD
DPTTANGELAYTLLEGGDFFNIDSTTGIITTKYENLDRETQSSYVVVVQAQDLRGLKQGG
TATTSVTIAVSDINDNIATFTKSSYVFSVKEDMKRGQRIDTIVLEDRDEIQNKDPIVTIE
PPSDIFEMERSQTKDGNLMLKQGLDYETKSSYTFFVHVKENHLQSPADNKDNPVIKAQVT
IQVLDVDEQPEFSKSIYNFNVIEEMMVNNIGVVSARDPDKANKAIRYSIEDKNSPIGINP
VTGQLFTVRKLDRELVANHMFQVKAKEEPNGLESFVNVNILVIDINDNKPELSIEEIFVC
ENDMAGMVIGTISATDKDDHLPAFSFTLVKPNGNFSVIDNNDNTSNIVLKHGGFSLEDSR
DYVIEIGISDGGRPPMSSITSLPIKVCRCDNKRIHTQCKAAQLKMGVGVYTLIPILCILT
ILVIVILIAMRKRHQKDALVTLGKSEIHEQLVTYDEEGGGEMDTNGYDVSILTSARNDGS
MSMRQGPSLYAMVKKPPTACKGDMAVMIEVKKDEADHDRDGIPYDTLHIYGYEGPESLAG
SLSSLDSSSTGSSLDYDFLNDWGPRFRTLAELYGVDGSEGSDSLY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacagtctgcatggaggcagatgactgggccagagatgtggatgggtctcttt
gccttggccctgaccctcagtctaaccatggctgaacatatggaccagagggaagcactc
caaaccagcccagttctccaccggcacaagagagagtggttgtggaacaacctttacgta
gaggaggaaaggccaaccgacaaacaatactatcttggaaagttaaagtcaactaaatct
ggtgacaggacacactatgtcattgaaggagatggtgccaacacaatcttcaaagtggat
gaaaaaggacacatctatgtcgctgaacgattggatcgagaggtgaaaagcaaataccat
ctaagggccaagttgtttgataccagcaacaacctggtggagaaagtggaagagtttgtg
atcctggttactgacatcaatgacaacgacccagtgtttactaaatcgttcaacgcttct
atcaaagagagatccaaaagaggaactaaagtgatagaagtcactgccactgatgcagat
gatccaacgactgcaaatggagaacttgcttacacattattagaggggggagatttcttc
aatatagacagcacaacagggattatcaccaccaagtatgagaacctggaccgtgagacc
cagagtagctatgtggttgtggttcaagcccaggatctgagaggacttaaacaagggggc
actgccaccacctctgtcaccatcgcagtcagcgacatcaatgataacatagccacgttt
accaaaagttcctatgtatttagtgtaaaagaggacatgaagcggggacagagaatagac
accatagtcctggaggacagagatgagatccagaataaagacccaatcgtcaccatagaa
cctccatctgacatctttgaaatggagcgcagtcagaccaaagatggcaacctcatgctg
aaacagggactggattatgaaaccaagagcagctacacgttctttgtgcatgtgaaggag
aaccacttgcagtcccctgcggataataaggacaatccagtgatcaaggcccaggtgacc
atccaggtgctagatgttgatgagcagccagaattcagcaagagcatctacaactttaat
gtgatagaggaaatgatggtcaataatattggagtcgtttcagccagagatcctgataaa
gccaacaaggccataaggtattccattgaggacaagaacagtcccattggtatcaacccc
gtaactggacaacttttcacagtgaggaagctggatcgggagcttgtagccaatcacatg
ttccaggttaaagctaaggaggaaccaaacggactggaatcttttgtgaacgtcaacata
ctggtcattgatatcaatgacaacaaaccagagctgtccattgaagagatattcgtttgt
gaaaatgatatggctggcatggtgattgggaccataagtgcgacagacaaagatgatcat
ttgcccgcattcagcttcacattggtgaagccgaacggcaacttttcagtcatcgataac
aacgacaacacatctaacatagtcctgaaacatggaggcttcagcctggaggactccagg
gattatgtaatagagattgggatcagcgatggaggcaggcctcccatgagcagtatcacc
tctctgcctatcaaagtgtgcaggtgtgacaacaagaggatccacacccagtgcaaagca
gcccaactcaaaatgggtgtgggtgtctacaccctgattcctatactgtgcatcctgact
attctggtcatagtgatcctgatcgctatgagaaagcgtcaccaaaaggacgccctggtc
actctgggtaagagtgagatccacgagcagctagtgacgtacgacgaggagggtggtggg
gagatggacaccaacggctacgacgtgtccatcctgacctcagctcggaatgacggcagc
atgagcatgaggcaaggccccagcctttacgccatggtgaagaaaccaccaactgcgtgc
aagggagacatggctgtgatgatcgaggtgaagaaagatgaagctgaccatgacagggat
gggattccctacgataccctgcacatctacggctacgaggggccagagtccctggctggt
agcctcagttccctggatagttcatccactggctctagccttgactatgacttcttaaac
gactggggccctcgcttcagaaccctggctgagctctacggggtagatgggtctgaggga
agtgactccctgtattga
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