Salmo trutta (river trout): 115202968
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Entry
115202968 CDS
T08542
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04371
Apelin signaling pathway
stru04514
Cell adhesion molecules
stru04520
Adherens junction
stru05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
115202968
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115202968
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115202968
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
115202968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115202968
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115202968
04090 CD molecules [BR:
stru04090
]
115202968
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
115202968
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Major cadherins
115202968
CD molecules [BR:
stru04090
]
Proteins
115202968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
RibLong
BACON_2
Big_13
Motif
Other DBs
NCBI-GeneID:
115202968
NCBI-ProteinID:
XP_029623036
Ensembl:
ENSSTUG00000002748
UniProt:
A0A673WLR9
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All DBs
Position
12:14087517..14102513
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AA seq
880 aa
AA seq
DB search
MGAFWFVELGLLTLFLQAFKPGSSEESKCIPGFNSEMYIFKVERNHLQSGRRLGKVVFDD
CTSRTSFLFHSEDSRFKVDGDGTLKLKRGVTLHNGHKEFYVSTQSMGKKITVPVRVLHEA
RHYHHHHEMTTQPQPGSSLSLPVLSFPKSSGGLKRRKRDWVIPPVNFPENERGPFPQNMV
QIRSSNDKEVKILYSITGNGADQPPVGLFTVDKNSGILYVTQPLDREKKDKYILLAHAVA
VGAGKAEAPMEIIVKVIDQNDNKPVFTQNPFMGTVPEAAKPGDEFMQVTATDADEEGSAN
SDVRYTILSQEPPLPSPNMFVINSVTGGIRVNAPGLDREKILKYTLEIQAADMEGNGLTS
FGKAIITVTDSNDNAPQFVTPSYTVSVPENKVDALVVKMPVTDGDEPHSSAWATTFKIVD
GDPEGLFNVSTGPSKLEGIITTEKPLDFEKNNKYTLLVTVANEVPFAFPLPTSTATVIVN
VEDVNEAPVFNPVAKIIRKPEDLPVDSDLVLYTATDPDTARNQKVTYKIKNDVAGWLSIN
KDTGLIKVKTDMDRESTFVQDNKYSVVVLGTDNDEIPATGTGTLIIELEDVNDNPPTIDE
RMIKVCNKESSPQLLSITDKDGAGFAAPYTVQLQGSSLSNWTARMNDSKTGIILTLKTML
DSGDYTVVLRVSDNQGLHQESTILASVCDCKGADVQCADKAVAGFGLSSILGILGAILLL
LLLSLLLLMFLRKRGGEKKEPLLQEDDVRDNIYYYDEEGGGEDDQDFDLSVLHRGLDNRP
DVFRNDIAPTMARPEYRPRPANPADIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGSE
AGSLSSLNSSSSGDDQDYDLLQQWGPRFKKLSDMYGGGED
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgggggccttttggttcgtggagttggggttattaacattgtttctccaggctttcaag
ccagggtcgtcggaggagtcaaaatgtataccaggtttcaattcggaaatgtacattttc
aaagtggaaagaaatcacttacaaagtggccggagactaggaaaagtggtttttgatgac
tgcaccagccgcaccagctttctctttcactccgaggattcacgcttcaaagtagatggt
gacgggacgctgaaactgaagaggggggtgactctgcataatggacataaggagttctat
gtctctacccagtccatgggcaagaagatcactgttccagtcagagtgttgcatgaggcc
agacactaccaccatcaccatgagatgaccacccagccccagcctggatcaagtctgtct
ctacctgttctgagcttccccaagtcttcaggaggtctgaaaagaaggaagagggactgg
gtcattcctcccgtcaacttcccagagaatgagcgaggccccttcccccagaatatggtg
cagatcaggtccagcaatgataaagaggtgaaaatcctgtacagcatcactggcaatggg
gcagaccaacctcctgtgggactcttcactgtggacaaaaactctgggattctctatgtg
acccagcctttggacagggagaaaaaagacaaatacattctcctagcccatgctgttgcc
gtgggtgcaggtaaggctgaggcacccatggagatcattgtgaaagtcatcgaccaaaat
gacaacaaacctgtatttacccaaaatccatttatgggaacagtccctgaggcagcaaaa
ccaggtgatgagttcatgcaggtaacagccactgatgctgatgaggagggctctgccaat
tctgatgtcagatacaccattctcagtcaggagcctccactaccaagccccaacatgttt
gtcatcaactctgtgactggagggattcgggttaacgcacctgggttggacagagagaaa
attcttaaatatactttggaaatccaagctgctgatatggagggaaatggccttaccagc
tttggcaaagccatcattacagtaacggacagcaatgacaacgcgccacagtttgtgacg
ccttcgtacactgtgtcagtcccagagaataaagtagatgccttggtggtgaaaatgcca
gtgactgatggggatgagcctcactcctctgcctgggccaccaccttcaagatagttgac
ggggaccctgaaggccttttcaacgtgagcacaggccctagcaagctggaaggcatcatt
acgacagaaaagccccttgactttgagaagaacaacaagtacactctgctggtcactgtg
gcgaatgaagtcccatttgccttccctctgcccacctccactgctactgttatagtgaat
gtggaggatgtgaatgaagctccagtcttcaacccagtggcaaagattatcagaaaacct
gaggacctccctgtggacagcgacctggttctgtacacagccacagacccagacactgca
aggaatcagaaagtcacatacaagattaagaatgatgttgctggatggctcagtatcaac
aaagacactgggctgataaaagtcaagacagacatggacagagaatccacttttgtccaa
gacaacaaatactctgttgttgttctgggcactgacaacgatgaaatcccagcaacgggc
actggcacccttatcatagagctggaggatgtgaatgacaaccctccaaccatcgacgag
aggatgattaaggtctgcaacaaggagtcctccccacagctgctatcaatcactgataaa
gacggagcgggcttcgctgctccatacactgtacagcttcaggggtcgtccctttcgaac
tggactgccagaatgaatgactcaaaaactggcattatcctgacactgaagactatgttg
gacagtggagattacacggttgtcctgagagtgtctgacaaccagggcctgcaccaggag
agcaccatcctggcctccgtgtgtgactgcaaaggagctgatgtccagtgcgccgataaa
gctgtagcaggcttcggcctctctagcattctgggaattctaggagccattttactactc
ctattgttgtctcttctgctgctcatgttcctgaggaagagaggtggcgagaagaaggag
cctctgctgcaggaagacgatgtcagggacaacatctactactacgacgaggagggaggt
ggcgaggatgaccaggatttcgacttgagtgttctgcacagaggtctggataaccgtccg
gatgttttccgtaatgacatcgctccaaccatggcccggccagagtatcgcccacgaccc
gccaacccagccgacataggcaacttcattgatgataacctgaaggcagctgacaacgac
cccactgctcctccctacgactccctcctggtgtttgactatgaaggaggtggctctgag
gccggctctctcagctccctcaactcctccagctcaggagacgaccaggactacgacctc
cttcaacagtggggcccgcgcttcaagaagctgtctgacatgtacggaggaggagaggat
tga
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