Salmo trutta (river trout): 115203050
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Entry
115203050 CDS
T08542
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115203050
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
115203050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_8
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
ARM_TT21_5th
TPR_6
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
115203050
NCBI-ProteinID:
XP_029623214
Ensembl:
ENSSTUG00000015067
UniProt:
A0A673YLZ1
LinkDB
All DBs
Position
12:17390527..17400014
Genome browser
AA seq
1149 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQTKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALELNSKCVGALVGLAV
LELNSKEPDSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPSRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYYREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLAKAGDKMRFDLVLASTEARQCSDLLSQAQYHVARARKQDEEEKE
IRAKQDQERDFLRQQMHKEQEEKRTKQEEDQKKLLEQRAMYVEKTKGLLSFADGMKEERK
EKKKGGGRRKKGDFDEFVNDGSDEDLPVRRRKKRKGGSGSEEEGRKKRRRPNKGGDDGSD
DEEGGSRPKKQRRPRAGGKKIQKAEPVPPSLKGKIKSKAIISSSDSSSDEDGLKIAEDRN
PRDSGSGSDDEGGHKKRIASDSESDGGRNHSGSEAGSPQRSGNSGSDSGCDRPVKRKRVQ
QQSDSEQSDNESKRSRSGSENESRPGSPAAVSGSEAGSPAGSPRRSDNGSEPGGSANEAS
NHGSGSDSD
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggatcaattgaaatccccttacgggacaccgacgaggttattgagcttgat
ttcgaccagctgccagaaggagatgaggtcatcagtatcctcaaacaggagcatacacag
ttgcacatatggattgctcttgctctggagtattacaaacagacgaagacggaggacttt
gtcaagctgctggaggcggcccgtatcgatgggaacctggactacagagaccatgagaaa
gaccagatgacctgtctggacaccttggcagcctactatgtccagcaggcacgtaaagag
aagaacaaagatgccaagaaggagctcatcactcaggccaccctgctctacaccatggca
gacaagatcatcatgtacgaccagaaccacttgttgggaagagcctgtttctgcctgctg
gagggggacaaaatggaccaggctgacgctcagttccactttgtcttgaaccagtctacc
aataacatccctgctctacttggtaaagcttgcatctccttcaataagaaggattacagg
ggagcactggcctactacaaaaaggctctacgcacaaaccctggatgtcctgccgaggtg
aggctggggatgggccactgctttgtcaagctcagtaagctggagaaggcccgtctggcc
tttggccgggccctggagctcaactccaagtgtgtgggagcccttgtgggcttggctgtg
ctggagctcaacagcaaggagcccgactccatcaagaatggagtgcagctcctctccaga
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctggctaaccacttcttc
ttcaaaaaggactacagtaaagtgcagcacctggctctccatgcctttcacaacacagag
gtggaagcgatgcaggctgagagctgctaccagttggcccgctcctttcatgttcaggag
gactatgaccaggccttccagtactactaccaggccacccagtttgcctcgtctaccttt
gtgctgcctttctttggccttgggcagatgtacgtgtaccgtagagacaaggagaatgca
gcccagtgctttgagaaggtcctaaaggcctaccccaacaactatgaaaccatgaagatc
ctgggatctctttatgctacttcagatgatcaggaaaagagagacattgccaaaggtcat
ctgaagaaggtgaccgagcagtaccctgatgacgttgaggcctggatcgagctggcccag
atcctggagcagaccgacatccagggcgccctctctgcctacggcacggccactcgcatc
ctgcaggagaaggtccaggctgacgtcccccctgagatcctcaacaacctgggggctctc
cacttcagactggggaacctgggagaggccaagaaatacttcctggcctctttggagcgg
gccaaagctgagggagagcatgacgagcattactacaacgccatctctgtcaccacctct
tacaacctagccaggctctatgaggccatgtgcgaattccacgaggcggagaagctctac
aagaacatcctgagggaacatcccaactacgtcgactgttacctgcgacttggcgcaatg
gctcgtgacaaaggaaacttctatgaagcttccgactggttcaaagaggctctgcagatt
aatcaggatcacccagacgcctggtccctgatcgggaatctccacttggccaagcaggag
tggggtccgggtcagaagaagtttgagcgtatcctcaagcagccgtccactcagaacgac
acctactccatgctggccctgggcaacgtgtggctccagaccctgcaccagcccagcagg
gaccgggagaaggaaaagagacatcaggatcgagccctggccatttacaaacaggtccta
cgaaacgactccaagaacctttacgctgccaacggcataggtgccgtcctggcccataag
ggctactatcgagaggcccgtgacgtgtttgcccaggtgagagaggccaccgctgatatc
agcgacgtctggctcaacctggcccacatctatgtggagcagaaacagtacatcagcgct
gtgcagatgtacgagaactgtctgaagaaattctacaagcatcagaacactgaggtgctg
ctgtacctggctcgggcactcttcaaatgcgggaaactccaggagtgcaaacagactctg
ctgaaggcacgtcacgtggcccccagtgacacggtgctgatgttcaacgtggccctggtt
ctgcagaggctggccactctggtactgaaggacgagaagagtaacctaaaggctgtactc
agtgctgtcaaagagctggagctggcccaccggtatttcagctaccttgccaaggcaggt
gacaagatgaggtttgacctagtgcttgcctccactgaggccaggcaatgctctgacctg
ctgagtcaggcccagtaccacgtggctcgggccaggaagcaggacgaggaggagaaggag
atccgggccaagcaggatcaggagagggacttcctacgccaacagatgcataaagaacag
gaggagaagagaaccaagcaggaagaggatcagaagaagctgctggagcagagagccatg
tacgtggagaagaccaagggtctgctctccttcgccgatggaatgaaggaggaaaggaaa
gagaagaagaaaggtggcggccgacgcaagaaaggtgactttgatgagtttgtcaacgat
ggctctgatgaggacctgccagtgagaaggaggaagaagaggaagggtggcagcgggagt
gaggaggagggccgcaagaagaggaggagacccaacaaagggggtgacgatggcagtgat
gacgaggaaggaggctcacggcccaaaaagcaacgcagacccagagcaggcggcaagaag
atccaaaaggccgagcctgtgccaccgtctctcaaaggcaagatcaagtcgaaggccatc
atctcatcctccgactcttcatcagacgaggatggactgaaaatagctgaagacagaaac
cccagagacagtggttcaggctctgatgacgagggcggccacaagaagcgcatcgcctcc
gacagtgagtccgacgggggccggaaccactctggcagcgaagctggaagcccccaacgc
tccggaaactcaggtagcgactcaggctgcgaccgtccagtgaagaggaagagagtgcag
cagcagtctgactcagagcagtctgataacgagagcaagaggagccgctctgggtcggag
aacgagtcccgaccaggctcaccggccgcagtctctggttctgaagcaggttctccagcg
ggctccccacgccgttccgacaacggatcagaaccagggggctctgccaacgaggcctcc
aaccacggctctggctctgacagtgactga
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integrated database retrieval system
