Salmo trutta (river trout): 115203068
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Entry
115203068 CDS
T08542
Name
(RefSeq) lysine--tRNA ligase-like isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115203068
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stru01007
]
115203068
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stru03016
]
115203068
Enzymes [BR:
stru01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
115203068
Amino acid related enzymes [BR:
stru01007
]
Aminoacyl-tRNA synthetase
Class II (A)
115203068
Transfer RNA biogenesis [BR:
stru03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
115203068
Prokaryotic type
Other AARSs
115203068
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
115203068
NCBI-ProteinID:
XP_029623272
Ensembl:
ENSSTUG00000036359
UniProt:
A0A674CUL4
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Position
12:18095929..18106775
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AA seq
610 aa
AA seq
DB search
MLTLVVRTARHQVCQAFGVRAQGVKFALPSTVSVPALIQGNRWRGDKSELKRRMKAEKKA
SEKEAKVKEQVEQKETNDQAVQNAYGADEETLDPNQYFKIRTQAIQALKGTAEDPYPHKY
NVDLSLTEFIEKYNHLQPGDQLTDIVLNVSGRVHAKRESGAKLIFYDLRGEGVKLQVMAT
NRSYKSEEEFVRINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFG
LKDKETRFRQRYLDLILNDYVRQKFVTRAKIITYLRSFLDGLGFLEIETPMMNLIPGGAV
AKPFVTYHNDLDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCE
FYMAYADYHDLMDITEKLLSGMVKHITGGYKVKYHPEGPEGPTYEIDFTPPFRRVSMTHD
LEKEMGVKFPAADTYDSDETRKFFDELCAQKGVECPPPRTTARLLDKLVGDFLEVTCINP
TFICDHPQIMSPLAKWHRSEKGLTERFELFVLKKEICNAYTELNDPIRQRELFEQQAKAK
AEGDDESMSVDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLFFPAMKPDDNK
TAPLTEGTSV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctgactctggtggtcaggactgccaggcaccaggtgtgtcaagcctttggggtcagg
gctcagggggtaaagtttgctctccccagcacagtgtcagtcccagctctaattcagggg
aatcgctggcgaggtgacaaaagtgagctgaagaggcgaatgaaagctgagaagaaggca
tctgagaaggaagccaaagtcaaagagcaggttgagcagaaggagaccaatgaccaggca
gttcagaatgcatacggggcagatgaggagaccctggaccctaaccaatactttaagatc
cgcactcaagccatccaggctctgaagggcacagcagaggacccataccctcacaagtac
aatgtagatctgtcgctcacagagttcattgagaaatacaaccacctacagcctggagac
cagctaacagacattgtcctcaatgtatcaggtcgtgtccatgccaagagagagtccggg
gccaagttaatcttctatgacttgcgaggggaaggcgtcaagctgcaagttatggcaacc
aacaggagctacaagtctgaggaggagtttgtgcgcattaacaacaagctgcggcgtggt
gacatcattggtgttcgtggtaacccagggaagaccaaaaagggcgagctgagcatcatt
cccatagagatgaccctgctttcaccttgcttgcacatgctgccccacctccactttggt
ctcaaggacaaggaaacacgattccgccagcgatacctggatctgattctcaatgactat
gtgaggcagaagtttgtaacacgtgccaagatcatcacttacctccgcagcttcctggat
gggctgggattcctggagattgagacgcccatgatgaacctgattcctggtggggccgtt
gccaaaccctttgtgacctaccataacgacctagacatgaacctttacatgaggatcgct
cctgagctctaccacaagatgcttgtggttggggggattgacagagtgtatgagattgga
cggcagttcagaaacgaaggcattgacctcacccacaatccagagttcaccacctgcgaa
ttctatatggcctatgcagattaccatgacttgatggatatcacagagaagcttctctcg
gggatggtcaagcacatcactggagggtacaaagtgaagtatcatccagagggtccagag
ggcccgacctatgagatcgacttcactcctcccttcaggagggtcagcatgacacacgac
ctggagaaggagatgggcgtcaagttcccagctgctgacacctacgacagtgacgagacc
cgtaaattctttgatgaactgtgtgcccagaaaggagtggagtgccctcctcctagaacc
actgcccgcctccttgacaagttggtgggagacttcctggaagtcacgtgtatcaacccc
acgttcatctgtgaccacccacagatcatgagccccctggccaagtggcaccggtcagag
aaaggcctgacggagcgttttgagctgtttgtattgaagaaggagatctgtaatgcctac
actgagttgaacgaccctatcagacagagggagctctttgagcaacaggctaaggccaag
gcagagggtgatgacgagagcatgtccgttgatgagactttctgcacggcactagagtat
ggcctgccaccaactgctggctggggcatgggcattgaccgccttaccatgttcctcaca
gactccaacaacatcaaggaggtgctgttcttccctgccatgaagcctgatgacaacaag
acagcccctctcacagagggcacctctgtgtag
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