Salmo trutta (river trout): 115203204
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Entry
115203204 CDS
T08542
Symbol
pkp3b
Name
(RefSeq) plakophilin-3 isoform X1
KO
K28841
plakophilin 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru04382
Cornified envelope formation
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
115203204 (pkp3b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115203204 (pkp3b)
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GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Atx10homo_assoc
ZER1-like_2nd
WRM1_C
BAR1_C
Motif
Other DBs
NCBI-GeneID:
115203204
NCBI-ProteinID:
XP_029623508
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Position
12:23625800..23644435
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AA seq
813 aa
AA seq
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MSATVASESCFLSALQPNTAVTTYAVPSDVQLGPRGSIMDEVERAKRVQQQVHLRLAEKR
SSSLTRLNGSNCISPDHGGTMRYNTYNPRFSSKSVVYNTGSRTMKMPPVSQQYLGGGYSS
RSAVELGPRYRISQPPVNTGYLHHDDIQLGGYQTSRARTTRSRSVCQADQEAVVQGVGGL
LTLRHQQPNPVASWVARDGMATEFHSYHGGGIPAPATMRRTLSGTLAGGGSSGWREAELV
YQHSYKGPAHRTISRINNRQQQQQHLSSASGLQQWQQVSGGGGGSVYGGWGQYQNSLPRP
ASLHSMKSMGKGMDVPDGGRDSADSNEKLGGMHSLDMPTAVNYLSMSDTAMQVLGAAYIQ
HQCYHSSDAKNQVRLLKGVPALVQLFSSDSQEVQRYATGATRNLIYENMDNKAALIEAGG
IAKLISVLNEPDEELRKNITGILWNMSSKDSLKEKLARETLSELTERVLVPLCSGGDSEL
SRQSPSEADIFYNTTGCLRNLSSVNERTRQQMRDMRGLVDSLVAYIQNSLQDEKAEDKGV
ENAVCVLRNLSYQLYSEIPPSTLLRLEGPTRARATTETESIGCFTPQSKKAKERQNQELS
TFSEVAKQPKGAEWLWHPQVVGLYNRVLQHYETNTATREAAAGALQNITAGETRWASVLS
WVALEQERMLPVVLDLLQTQSDQEMRSLTGLLRNLSRHSRNKDDMATRVVNVLVTKLPSD
GHQKEPSGEVVVNICGTLNNLVAGSSLAARDIAFFDGLPKLVAIKSSHDNSSGKLKAAKA
ASTVLFNMFQYNKLHKDYKQKGFTRCDFTDTAI
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgaccgttgcatcagagagctgctttctgtccgccctacagcccaacaccgcg
gtcaccacttatgcagtcccgtccgatgtgcagttgggaccgaggggttccataatggac
gaggtggaaagggctaagagggttcaacaacaagtccatttgcgcctcgccgaaaagagg
tcttcatccctcacacggctgaacggctcgaactgcatttccccagaccatggtggcaca
atgagatataacacgtacaaccccagattcagctctaagtcagtggtgtataacacaggg
agcaggaccatgaagatgcccccggtatcccagcagtacttgggaggtgggtactcgtct
cgctcagcggtggagttaggacccagatacagaatcagccagcctccagtcaacactggc
tacctccaccatgacgacatccagctgggtggctaccagaccagccgggcgaggaccacc
aggtccagatcagtttgtcaggctgaccaagaggcagtggtccagggtgtgggaggcctg
ctcaccctgcgccaccagcagcccaacccagtggccagctgggtggcccgggatggcatg
gccacagagtttcactcctaccatggtgggggtatacctgctccagcaacgatgaggcgc
acactcagtggaaccctggcggggggtggtagcagtgggtggagagaggcagagctagtt
taccagcactcctacaaaggccccgcccaccgtaccattagtcgcatcaacaacagacaa
cagcagcagcaacatctgagctcagcgtcggggctgcagcagtggcagcaggtgtctggc
gggggcggtggcagtgtgtacggaggctgggggcagtaccagaactccctgccccgaccg
gcctccttgcacagcatgaagagtatggggaaaggcatggacgtgcctgatgggggcagg
gattcagctgacagcaatgagaaactcggaggaatgcacagtttagacatgcccaccgcg
gtcaactacctctccatgtccgacacagccatgcaggtgctgggagcagcctacatccag
caccaatgttaccatagcagtgatgccaagaatcaggtgcgtctgctgaagggtgtccca
gccctggtgcagctcttcagcagtgacagccaggaggtccagcgctacgctacaggcgct
acacgcaacctcatctatgagaacatggacaacaaggcggccctcattgaggctggggga
atagccaagctcatcagtgtcctgaacgaaccagatgaggagcttcgcaagaacatcact
ggtattctgtggaacatgtcctctaaggacagtctgaaggagaagttggccagagagaca
ttgagtgagctcacagagagggtgctggtgcccctgtgcagtggtggagattcagagctg
agccgtcagagtccgtctgaggcagacatcttctacaacaccacaggctgcctgaggaac
ctgagctcagtgaatgagaggacgaggcagcagatgagagacatgcgagggctggtggac
tctctggtggcctacatccagaactcccttcaggatgagaaagcagaggacaaaggtgta
gagaatgcagtgtgtgtcctgaggaacctgtcttatcagctgtacagtgagatccctccc
tcaaccctactgcgactggaggggcctacgcgggccagagccactactgagactgagtcc
attggctgtttcaccccacagagcaagaaggcaaaggagcgacagaaccaggaactgtcc
accttctcagaggtggctaagcagccgaagggggcggagtggctgtggcacccccaggtg
gtggggctgtataaccgtgtgcttcagcactatgagaccaacacggcaacacgagaggct
gcagcaggggccctgcagaacatcacagccggagagaccaggtgggcgtcagtgctgagt
tgggtggctttagagcaggagcggatgctgcctgtggtgctggacctcctgcagacacaa
agcgaccaggagatgcgttccctcactggcctcctgaggaacctgtcccgacacagcaga
aacaaggacgacatggctacgagggtagtgaacgttctggtgaccaagctccccagtgat
ggccaccagaaggaaccctccggtgaagtggtggtcaacatatgtgggaccctcaataac
ctggttgcaggcagctcactggcagcgagagacatcgccttctttgatggactccccaaa
cttgttgcaatcaagtcttcccacgacaacagctcagggaagctgaaggctgccaaggct
gcttccacggtactcttcaacatgttccagtacaacaagctgcataaagattataaacag
aaagggttcacgaggtgtgacttcaccgacacggccatttag
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