KEGG   Salmo trutta (river trout): 115203230
Entry
115203230         CDS       T08542                                 
Name
(RefSeq) caprin-1-like isoform X1
  KO
K18743  caprin-1
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stru03019]
    115203230
Messenger RNA biogenesis [BR:stru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     115203230
SSDB
Motif
Pfam: Caprin-1_C Caprin-1_dimer EC042_2821
Other DBs
NCBI-GeneID: 115203230
NCBI-ProteinID: XP_029623564
Ensembl: ENSSTUG00000018642
LinkDB
Position
12:24531923..24543279
AA seq 689 aa
MPSATVGNNAVQSSSPELGSGTQSEAMKQVLQVIDKKVRNMEKKKGKLDDYQAKKNKGER
LNQDQLDALTKFQEVTNNLDFARELQKSFLSLGQEIQKAVKKSARREQLQREEMEQRRLK
TVLELQFLLDRLGDEQTRQDLKQPAAGSPLLTDADLTALDNFYKLVGPERDHDVRLTDQY
EEASLHLWELLEGRDQAVAGTTYKALKETLDKVLLSGYFDRAQMHQNGVCEEEEQEEEEE
EEEEEEEQQSVVHESSGSGEQPAEPEGTVTEEYTEAIEVEASEFVNRQFIPETTYSSTGK
DQLEEWIADVQVVNSLQHQSPPQMTPEPHTVNPVSHTPDPVVRKQVVQDLMAQMQGTYNF
MQDSMLEFDGHALDPAIVLAQPMKSAQSMDLQQMGQFHSESRLSQPSSVPESTHVPMVSP
TPDGYSSTAPLYQPSHTAEPRPQTDGTDHIQASMSLSSEQSPAPSSLPSAFPPVSTPHSG
GINVNAAPFQSMQAVFNLNAPVPPTNEADSLKQNQFPGGYGQGFSSQAEHSVEEPDIQQD
TLQSAVGGFQDQVMSAAAGHQVQSPQGPGFGRQGQSFYNSRGGVPRAGPRNPRGMINGYR
GSSNGFRGGYDGYRPPFSNAPNNGYGQQAQFSTAPREYPNSTHQREGYQPGYKRGAAQGP
RGCSRVTGRGGLFKPSRGIVTQMAGHQAN
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgccttcagcaacagttggcaacaatgctgttcagtcctccagcccagagttgggttct
gggacccagtctgaggccatgaagcaggtcctgcaggtgatagacaagaaggtccgcaac
atggaaaagaaaaagggcaagctggatgactaccaggccaagaagaataaaggagaacgg
ttgaaccaggatcagctggatgccttgaccaagttccaggaagtaaccaacaacctggat
tttgcaagggagttgcagaagagcttcctgtctttggggcaagagatccagaaggcagtg
aagaagtctgcccggagggagcagctgcagcgggaggagatggagcagaggcggctgaag
actgttctggagctgcagttcttgcttgaccggctgggggatgagcagacgaggcaggac
ctgaaacagcccgctgcaggctcccccctgctcaccgatgctgacctcaccgcactggac
aatttctacaagctggtgggccctgaacgggaccatgacgtcaggttgactgaccagtat
gaggaggcctccctacacctatgggaactgctagagggcagagaccaggctgtggcagga
acaacatacaaggcactgaaggagaccctggacaaggtgctgctgagtggctattttgac
agagcacaaatgcatcagaacggagtgtgtgaagaagaggagcaagaagaagaagaagag
gaggaggaggaggaggaggagcagcagtctgtggtgcatgagtcgtctgggagcggggag
cagcctgcagaaccagaaggaacagttacggaagaatacacagaggccattgaagtagaa
gcctcagagtttgtaaacagacagttcattccagaaaccacatacagcagcactggcaaa
gaccagttagaagagtggatagcagacgtccaggtggtcaattccctccagcaccagtct
cctccccagatgacccctgagccccacactgtgaacccagtctcccacacgcctgacccc
gtggtccggaagcaggttgtacaggacctcatggcccagatgcaggggacctataacttc
atgcaggactccatgttggagtttgatggccatgccctggacccagccatcgtgttggcc
cagcccatgaagtctgcacagagcatggacctgcagcagatgggtcagtttcattcagaa
tccagactttctcaaccaagctcagttcctgaatctacacacgtccccatggtctccccc
acacctgatggctactcctccacagcgcccctctaccagccctcccacacagcagagccc
cggccacagacagacggcaccgaccacatccaggcctcgatgtccctgtcgtctgagcag
tcccccgccccgtcctccttgccctctgccttcccgcccgtctccaccccccacagcggc
ggcatcaatgtcaacgcagcaccattccagtccatgcaagcggtgttcaacctgaacgcc
cccgtgccccccactaacgaagcagacagtctgaagcagaaccagttccccggcggctac
ggccagggcttcagcagccaggccgagcactccgtggaggagcctgacatccagcaggac
actctacagtccgctgtaggaggcttccaagaccaagtgatgtcagcggcagcgggccac
caggtgcagtcgccccaggggccaggctttgggcggcaaggccagtccttctataacagc
agggggggcgtgcctcgcgcaggccccaggaaccctcggggcatgatcaatggataccga
ggatcctctaacggcttcagaggaggatatgatggctatcgccctcccttctcgaacgct
ccaaacaatggttatgggcaacaggcccagttcagcacggcaccccgggagtaccccaac
agcacccaccagcgggagggatatcagccaggctacaagcggggcgcagcccagggacct
cggggttgctctcgagttacaggccgggggggactgttcaagcccagccgagggattgtg
acccaaatggctggacatcaagccaattag

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