Salmo trutta (river trout): 115203270
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Entry
115203270 CDS
T08542
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115203270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115203270
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
115203270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
PLAC
TSP1_spondin
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
115203270
NCBI-ProteinID:
XP_029623676
Ensembl:
ENSSTUG00000027616
LinkDB
All DBs
Position
12:26324714..26364730
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AA seq
634 aa
AA seq
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MLSGLALLLLVCLLHMFVTAQGNPWSQSLGCDEYLGSGKVMDKCGVCGGDNTACKLVSGL
FQQHSLNKVGYHKIVEIPEGATKINVTETLKSRNYLALKSRSGRSIINGNWAIDRPGKYE
GVGTMFTYRRPNEVTSTAGESFLAEGPTNEILDVYVIYQQPNPGVSYEFILPSDNPPQHP
DHRPGGNTLHGQSGNDHRGNPNQDGYDPAGGGKYPPQVPNNQVPAVQPPRRQREYNWKLS
GATECSASCGRGSRYTIFRCVHRLSHEHVPENQCDSSTRPSSQEEPCNLQSCPAFWDIGE
WSECSKTCGLGMQHRQVLCRQVYANRTLNVHTSRCRHLEQPETTSTCQLKICSEWQIRTE
WSACSVPCGVGQRTREVHCVSNVGDFVSDEECNMKLRPSDNENCDMGPCAKSWFFTEWGN
KCSAECGMGIRTRGVLCLTNHISSLPLEGCGHERPTDSQVCNHGPCESRIEWFTAPWSQC
STECGSGSQQRAVVCLMKSDEGFNVMPPYECSSLDKPLNQQSCHLKPCGAMWYHTDWSAC
SKMCEGGFRVREVRCLSDDMLSSEGCKEELKPVGREECNPEPCIPHIDENCRDKYFNCNV
VVQARLCVYDYYKTTCCASCTRVAHRQSQHRALS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgctatcaggtctggctcttctgctgcttgtctgcctcctccacatgtttgtgactgcg
caggggaacccgtggtcacagagtctgggctgcgatgagtacctgggctcaggcaaggtg
atggacaagtgtggggtgtgtggcggggacaacacggcctgtaagctggtgtcagggctc
ttccagcagcacagcctgaacaaggtgggctaccacaagatagtggagatcccagaggga
gccaccaagatcaacgtcaccgagacgttgaagagcaggaattacctggctctgaaaagc
cgctcaggtcgctccatcatcaatgggaactgggccattgaccggccggggaagtatgag
ggggtgggcaccatgttcacctaccgacgacccaatgaggtcaccagcactgccggggag
tccttcctggctgaggggccaaccaatgagatcctggatgtttatgtgatctaccagcag
cccaacccaggagtgagctatgaattcatccttccctctgacaaccctccacagcacccc
gaccacagacctggagggaacactctgcatgggcaaagtgggaatgatcaccggggcaac
cccaaccaggatgggtacgatccagcaggagggggcaagtaccctccccaggtacccaac
aaccaggtgccagcagtccagccacccagacgtcagagagaatacaactggaaactgtct
ggggcaacagaatgtagcgcctcctgtggcagaggtagcaggtacaccatcttccgctgt
gtccacagactgagccatgagcatgtaccagagaaccagtgtgacagcagcaccaggccc
agttcacaggaggagccctgcaaccttcagtcctgccctgccttctgggacattggtgag
tggtcggagtgcagtaagacatgtggcctgggtatgcagcaccggcaagtcttgtgcagg
caggtgtatgccaaccggaccctcaacgtccacaccagccgctgccgccacctggagcag
cccgagaccaccagcacctgccagctgaaaatctgcagcgagtggcagatacgaaccgag
tggagcgcatgctctgttccctgtggcgtgggccagaggaccagggaggtgcactgtgtc
agcaacgtgggagactttgtgtcggacgaggagtgcaacatgaagctgcgacccagtgac
aatgagaactgtgacatggggccctgtgctaaaagttggttcttcactgagtgggggaat
aagtgttctgctgagtgtgggatgggcatccggacccgcggcgtactgtgcctgaccaat
cacatcagcagcttgcctctggaggggtgtggccatgagcgccccactgactctcaggtc
tgtaatcacggcccctgtgagagtcgcatcgagtggtttacagccccctggagtcagtgc
tcaacggagtgtggctcgggcagccagcagagggcagtggtgtgtctgatgaagtctgac
gaggggttcaatgtaatgccgccctacgaatgttcttctctagacaagcctcttaatcag
cagagctgccacctcaagccctgcggggccatgtggtaccacacagactggagcgcttgt
tctaagatgtgtgaggggggcttccgtgtgagggaggtgcgctgtctgtctgatgacatg
ctttccagtgagggctgtaaggaggagctgaaaccagtggggagagaggagtgcaaccca
gagccctgcatcccacacatagacgagaactgtcgagacaagtatttcaactgcaatgtg
gtggtccaggcacgtctctgtgtgtacgactactacaagacaacctgctgtgcctcctgc
acacgagtggcccacagacagtcacaacacagggcactcagctag
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