Salmo trutta (river trout): 115203304
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Entry
115203304 CDS
T08542
Name
(RefSeq) iroquois-class homeodomain protein irx-3-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115203304
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115203304
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
115203304
NCBI-ProteinID:
XP_029623738
Ensembl:
ENSSTUG00000040263
UniProt:
A0A674D7C3
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Position
12:complement(28569066..28572511)
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AA seq
460 aa
AA seq
DB search
MSFPQLGYQYIRPIYPPERQGISNARAGTELSPSGALSNVLSTMYGSPFAAAAQGYGAFL
PYSNDISIFNQLGAQYELKDSPGVQGHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTS
TLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRSRTD
EEGNVYNSDHEEGEEGDKREDEEEIDLENIDTENIENKDDLDDQDDLHADLKLDGRSDSE
ISDGYEDLQGPDQRFLKAVVKEGKDIHVDRVEHFHHHHHHSFEIKASQPNGEQVKLNPVS
INSPPSENAAPAQKPKIWSLAETATTPDNPRKSPQMNGSNTVGPAAQTIISPHHRLLSCP
VGKIQNWTNRAFSAHQLALLNSNHYLGLANQASANGLALYSRQQHQHTQDKSHSSDTAVT
ERSSALEAEKKLLKTAFHPVHRRPQNQLEAAVVLSALASS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctgggatatcagtacatccgaccgatatacccaccggagcgccag
ggtatcagcaacgcccgagccgggacggagttgagcccgtccggggcactctcaaacgta
ctctcaactatgtatggatcacctttcgccgcagcagcacagggctatggagcatttctg
ccctattcaaacgatatatcaattttcaatcaattgggtgctcagtatgagttgaaagac
agtccaggcgtccaaggacacccaggatttgcccaccatcacccagcgttttacccatat
ggccagtatcagtttggtgacccgtccagacccaaaaatgcgaccagggagagcacgagc
acactgaaggcctggctgagcgagcaccgtaagaacccctaccccaccaagggggagaag
atcatgctggccatcatcaccaaaatgaccctcacccaagtttccacctggttcgccaac
gccaggaggaggctaaagaaggagaacaagatgacctggactccccgaagccgcacagac
gaagagggaaatgtttacaacagtgatcacgaggagggagaggaaggggacaagagggag
gatgaggaagagattgatttagaaaatatcgacacggaaaatatcgagaataaggacgac
ttggatgatcaggatgacctacacgctgatttaaaattagatggtagaagcgactctgag
atttcagacggctatgaggatttacaagggcccgatcagagatttctgaaggctgtagtg
aaggagggcaaagacattcacgtggaccgggtcgagcacttccaccaccaccaccatcac
tcttttgaaattaaagcctcacaaccgaatggcgaacaagtgaaactgaatcctgtgtcc
atcaactcgcccccatcagaaaacgcggccccggcccagaagccaaagatttggtctttg
gcggagacagcaacaactcctgacaatccccgcaaatctccacaaatgaacggcagcaac
acagttgggcccgcggcccagaccataatcagccctcaccacagactcctctcttgtcct
gttggaaaaatccagaactggacaaaccgagcgttttctgcccaccagctcgcattactg
aactctaaccattaccttggactggcgaaccaagcttcggctaacgggctcgccctctac
agcaggcagcaacaccaacacacgcaggacaagagtcatagctcagacacagccgtcaca
gagagatctagtgccttggaagcagagaaaaagttgttaaaaacagccttccacccagtt
catagacggcctcagaaccaactcgaggcagcggtggttctatcagctctcgcctcctcc
tag
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