Salmo trutta (river trout): 115203306
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Entry
115203306 CDS
T08542
Name
(RefSeq) iroquois-class homeodomain protein IRX-5-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115203306
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115203306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
115203306
NCBI-ProteinID:
XP_029623741
Ensembl:
ENSSTUG00000040286
UniProt:
A0A674D7T6
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Position
12:28917647..28921278
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AA seq
451 aa
AA seq
DB search
MAYPQGYLYQPSPSLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGTTAFTSASPG
YNSHLPYSAEAGAAATFASYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATR
DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPSKPTDKGDSTDTESDHKLLNPGDIVCDRFKEENHGKET
DPLLSDLELKDQGDRTELLPESAKPTTSSPSAMPRGGTELVAQDKPSEMGHAPGTVNNNV
TSVIHSSPSAPKPKLWSLAEIATSSDRCKSSSDGLQGHGMGHSTVITTNAASPSRSSPQC
PLPNSTVLSRPIYYTSPFYPGYTNYGSFGHLHSHSNHGSGTGSTAHFNGLNQTVLNRAEA
LVRESQKGRGQTQVDLCKDSPYELKKGMSNI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccatccccttctttggcgctgtattcatgc
ccggcgtacagcaccagcgttatatcgggacccagaaccgaagaacttggtagatcctca
tctggctctgcttttgctccctatgccggaactaccgcgttcaccagcgcttcgcccggg
tacaactcccatctcccgtacagtgcggaggcgggagcggccgccacattcgcttcatac
gtgagttctccctatgaccacacgacgggcatggctgggtctataggatatcacccctac
gctgctcccctgggttcatacccctacggtgacccggcataccgaaaaaacgcgacccgg
gatgccaccgccactctcaaagcctggttgaacgagcaccgtaagaacccctaccccacc
aagggggagaagatcatgctggccatcatcaccaaaatgaccctcacccaagtttccacc
tggttcgccaacgccaggaggaggctaaagaaggagaacaagatgacctggactccccga
aaccggagcgaggacgaggaggaagacgagaacatcgatctggaaaagaatgacgacgac
gagcctagcaagccgacagacaagggagactcgacagacacagagtcagatcataaattg
ctgaacccgggggacatagtgtgcgacagatttaaagaggagaatcatggcaaagaaacg
gatccccttctgagcgacttggaattaaaagaccagggggatcggacagagttactaccc
gagtctgctaaacccaccacctcgtctccatccgccatgcctcggggaggaaccgagctc
gttgcgcaagacaagccgtcagaaatgggccatgcgccgggcacggtaaacaacaacgtg
acgtctgtcattcactcctccccatcagcccctaaacccaaactctggtccctggctgag
atcgcaacgtcctcagacaggtgtaagagcagcagcgacgggctgcagggccatgggatg
ggtcacagcacagtgatcaccaccaatgcagcgtcaccatcacggtcctccccacagtgc
cctctcccaaacagcacagtcctatccaggcctatctactacacgtcccctttttacccg
ggctacacgaactatggcagctttggacatcttcacagtcacagcaatcacggttcgggc
acgggctccacggcacatttcaatggattaaaccagactgtgttaaatagagcagaagct
ttggtaagagaaagccagaaaggcagaggccaaacgcaggtagatctttgtaaagactcc
ccttatgaactaaagaaaggtatgtcaaacatttaa
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