Salmo trutta (river trout): 115203333
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Entry
115203333 CDS
T08542
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecule (CAM) interaction
stru04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115203333
04517 IgSF CAM signaling
115203333
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115203333
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
NGL family
115203333
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRR_NXF1-5
VEGFR1-3_N_Ig-like
LRR_EndoS
LRRNT
Motif
Other DBs
NCBI-GeneID:
115203333
NCBI-ProteinID:
XP_029623806
LinkDB
All DBs
Position
1:complement(59557430..59587980)
Genome browser
AA seq
731 aa
AA seq
DB search
MRITTVTCLPCPSPLLLLLVQLLLRLLSGPEFVGAASPCPTHCSCSNQASRVICTRQSLD
GVPESISVNTRYLNLQENSIEVIKSDTFKHLRHLEILQLSKNKISQIEVGAFNGLPNLNT
LELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDYI
SDAAFVGLVNLRYLNLGMCGLKDIPNLTALVRLEELELSGNRLEIIRPGSFQGLVSLRKL
WLMHSQVKVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTTMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCMV
TNSAGNTTATAVLNVTAADVGVSYFTTVTVETVEPNEGPTVYAGVMNSHNESYVITPSGH
QWRGGIPTTASSLSAWSLSSSRATRPTFTVPITAETGYSGLDDVMKTTKIIIGCFVAITF
MAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGAGAGGRGSGISGGGTVSRDGGG
GGGVGGGQSLRLHHPEMVNLPNLARQEHLNHYYKAHHFNNNMMGLGMGLNNNTPSLSPCS
QTQSTPNSCAQGPTSTSGGTPTGGSLPSPVPLPQLGIHSSLKGLMGKGQNPQIEPLLFKS
GSKENVQETQI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgacctgccttccctgcccctcccccctcctcctcctattggtc
cagctgctactgcggctcctctctgggccagaatttgtaggggccgcctccccctgcccc
acccattgcagctgctccaatcaggccagtcgagtcatctgtacgagacagagtctggat
ggggtgcctgagagcatatcagtcaacacacgatacctcaacctgcaagagaattcaata
gaggttatcaagtcagacaccttcaagcacttgaggcaccttgagatcctgcagctgtct
aagaacaaaatcagtcagattgaggtgggagcattcaatggcctgcccaacctcaatacg
ctggagctgttcgacaaccgcctcaccctggtcccctcacaggccttcgagtacctcagc
aagctgcgggagctgtggttacggaacaaccccatcgagacgctgccgggctatgccttc
caccgcgtgccctcgctgcgccggctggacctgggagagctcaagaagctggactacatc
tcagacgccgcctttgtgggcctggtcaacctgcgctacctgaacctgggcatgtgtggt
ctgaaggacatccccaacctgacggccctggtgcgtctggaggagctggagctgtctggg
aaccgtctggagatcatccggcctggctccttccagggcctggtgtcgctccgtaagctg
tggctcatgcactcgcaagtgaaggtcatcgagcgcaacgccttcgacgacctgaagaac
ctggaggagctcaacctttcccacaactccctgcactcgctgccccatgacctcttcacc
ccgctgcaccagctggagcgggtgcacctcaaccacaacccctgggtgtgcaactgtgac
gtgctgtggctcagctggtggctgaaggagacggtgcccagtaacactacgtgctgcgcc
cgctgtcacgctccccccggcctgaagggccggtacatcggggagctggaccagagccac
ttcacctgctacgctcccgtcatcgtggagccgcccaccgacctcaacgttaccgagggc
atggctgcagagctgaagtgtcgcacgggcaccaccatgacctcggtcaactggctcacg
ccgaacggcaccctgatgacccacggctcctaccgggtccggatctccgtgctgcacgac
ggtacgctcaactttaccaacgtcacgctgagggacacgggtcagtacacctgcatggtg
accaactcggctggcaacaccacggcaaccgccgtgcttaatgtcactgccgccgacgtt
ggtgtcagctacttcactactgtcaccgtggagacggtggagcccaacgagggcccgaca
gtctacgcgggcgtcatgaacagccacaacgagtcatacgtcattaccccgtctggccac
cagtggaggggggggatccctaccaccgcctcctccctgtcagcctggtccttgtcctcg
tcccgggccacccggcccacctttactgtgcccatcactgccgaaacgggctactctggc
cttgatgacgtgatgaagaccaccaagatcatcattggctgctttgtggccattaccttc
atggcagccgtgatgctggtggtcttctacaaactgaggaagcagcaccagttgcacaag
caccacggccctgcccgcgccattgagatcatcaacgtggaggacgagattggcgccggt
gctggtggacgcgggagcggcatctcagggggcggcaccgtctctcgggatggaggcgga
gggggaggagtaggaggagggcagagcctgaggttgcatcacccggagatggtcaacctg
cccaacctggccagacaggagcacctcaaccactactacaaggcccaccacttcaacaac
aacatgatgggcctgggcatgggcctcaacaacaacaccccctccctctccccctgttcc
cagacccagagcacccccaactcctgcgcacaggggcccacctccaccagcggtggcacc
cccactggtggctcgctgccctcccctgtgcccctgccccagctgggcatccacagctct
ctgaaggggctcatggggaaaggccagaaccctcagatcgagcctctgctcttcaagagt
ggctccaaggagaatgtgcaagagactcagatctga
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