Salmo trutta (river trout): 115203420
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Entry
115203420 CDS
T08542
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115203420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stru03009
]
115203420
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
Pre-60S particles
GTPases
115203420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_IV
RsgA_GTPase
PDF2_C
Motif
Other DBs
NCBI-GeneID:
115203420
NCBI-ProteinID:
XP_029623965
LinkDB
All DBs
Position
12:34614111..34718915
Genome browser
AA seq
1153 aa
AA seq
DB search
MGHTSLDKIKALQKNPANVRNLCILAHVDHGKTTLADSLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYAAGEKDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVIVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRVIMELKLTSQEAYTHLQKILEQVNAVTGSL
FTSKVLEDRAVKEERAEEDKEEGDIKPAECPGSEQVYDWSAGLEDSDDSQLYFSPDQGNV
VFASAIDGWGFSIQQFAQVHSQRMGIRAEVLLKTSWGDFYLNAKAKKIMKGAHAKGKKPL
FVQLVLDNIWSLYDAVVTRRDKEKIEKMMMSLGVKVMTRDLRHSDPKVLLSAICSQWLPV
SQAVLFMVCDKLPSPLDMTSERLMSVGARRFHSLPLQTQELKTVFMQCSSDDTAPVIVFV
SKMFMVDAKALPQNKQRPLTQEEMAQRRELARQRHTERLAAIQQTESEEGNAQSGSTTPA
TTPGGDNTIGSEGVSGQMQALSLKAKPEEEEGKETFVAFARVYSGVVRRGQKVFVMGPKY
DPAQGLRMLPEGSTSVSACLPPVPHLACCTMDSLYLLMGRELEELEEVPSGNVLGIGGLE
ECVLKSATLSTSPALPPFIPLNFEATPIVRVAIEPKHPSEMPKLVQGMRLLNQADPCAEV
LIQETGEHVLVTAGEVHLQRCLDDLRERFAKIEISASKPIIPFRETVIRPPKVDMVNEDL
GKQQKVAVLHQVKESDTLHLDPSGLVTLTTPNRQATVGVRAIPLPEEVTLLLEGSADLIR
TLEQAGQAQREGRTLDMSTWTLDTLMRLKSRLEVLLQGRKWRNAVDRIWAFGPRRYGPNF
LLNSVEGYQRPSVWHCLEREKGEKEGGEKAEASAIRDFDNSVVSGFQLATLSGPMCEEPL
MGVCFSVERWDMNFPTQRTHLDSVTEEDSNSLDASVSKSPGEAAGQQEASGKAGGAGETP
SQAEGAVAGASQGRRRADVGAGLVDCYGPFSGQLIAAVKEACRHAFQAKPQRLMAAMYTC
EIMATAEVLGRVYGVLGKREGRVLQEEMKEGTEMFIIKAVLPVAESFGFADEIRKRTSGL
ASPQLVFSHWEVISSDPSWVPTTEEEYLHFGEKADSANQALKYMNAVRRRKGLYVEEKIV
EHGEKQRTLSKNK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaccagtttggataagatcaaagcactacagaagaatcctgccaacgttagg
aacctgtgcattctggcacacgtggaccatggcaaaacaactctggcagatagcttggtg
gcgagcaatggcattatatcaagtcgcttagccggaaagctgaggtacctggacagccgg
gaggatgagcagatccgagggatcacgatgaagtccagcgctatctcactgcactatgct
gctggggagaaggactacctgataaacttgattgactctccgggccatgtggacttttcg
tctgaggtgtccaccgccgtcagactatgtgacggggccattgtcatcgtagatgctgtg
gagggagtttgtccacagacccaagcagtgctgcgtcaggcgtggctggagaacatcagg
cctgtgctggtgatcaataagattgaccgggtcatcatggagctgaagctcacctctcag
gaagcctacacacacctgcagaagattctagagcaggtgaatgccgtgacaggctctctg
tttacctccaaagtgctggaggaccgcgcggtgaaagaggagcgggcggaggaagataag
gaggagggggacatcaagcctgctgagtgtcccgggtcagagcaggtgtacgactggagc
gccgggctagaggattcggatgactcccagctctacttctctccagaccaggggaatgtg
gtctttgccagtgccatagacggatggggcttcagtatccagcagtttgcccaggtccac
agccagaggatgggcatcagggctgaggtgctcctgaagacctcctggggagacttctac
ctcaacgctaaagccaagaagatcatgaagggagctcacgccaaaggaaagaagcctctg
tttgttcagctcgtcctggacaacatatggagtttatatgatgctgttgttaccagacga
gacaaggagaagatagagaagatgatgatgtcactaggtgttaaggtgatgaccagagac
ttgcgtcactccgaccccaaagtcctcctctctgccatctgcagccagtggctccccgtc
tcacaggctgtactgttcatggtgtgcgataagctgcccagtccgttggacatgacctct
gagagactgatgagtgtgggagcacgcaggttccactcactacccctgcagacccaggag
ctgaagaccgtcttcatgcagtgttccagtgatgacacagcccctgtcattgtgtttgtg
tccaagatgtttatggtggacgccaaggccctgcctcagaacaaacagaggccgttgacc
caggaggagatggcccagcgcagggagttggccagacagagacatactgagagactggca
gccattcagcagacagaaagtgaggagggaaatgcccaatcaggaagtacaacaccggca
accactcctggtggagacaacaccataggtagtgagggtgtctcaggccagatgcaggcc
ctgtctctgaaggctaaaccggaggaggaggaggggaaggagacgttcgtagccttcgcc
agagtctacagtggggtggtccgcagaggacagaaggtgtttgtgatggggcccaagtac
gaccctgcacaaggcctgcgcatgctcccagagggcagtactagtgtgagtgcctgtctc
cctcccgtccctcacctggcctgctgcaccatggacagcctctacctgctgatgggcaga
gagctggaggaactagaagaggtgccatcagggaacgtactgggtattggcggactcgag
gagtgtgtgttgaagtctgcgaccctctccacctcccctgccctcccccctttcatcccc
ctcaacttcgaagctacgcccattgtacgagtggccatcgaacccaaacacccaagtgag
atgcctaagctggtacagggtatgaggctgttgaaccaggctgacccgtgtgctgaggtt
ctgatccaggagacaggagaacacgtactggtcacggccggagaggtccacctgcaacgc
tgtctggacgacctccgagagaggtttgccaagattgagatcagtgcctccaagcctatc
atcccattcagagagaccgtgatcagaccacccaaagtggacatggtcaatgaagacctg
gggaaacaacagaaggtggctgtgctccaccaggtgaaagagtcagacaccctgcacctg
gaccccagcggcctggtgaccctcaccacccccaacagacaggccaccgtgggggtacgg
gccataccactacccgaagaggtgactcttctactggagggtagtgctgacttgatccgg
accctggagcaggcaggtcaggcccagagggaggggaggaccctggacatgagtacctgg
accctggataccctgatgaggctgaagagcaggctggaggtcctgctgcaggggaggaag
tggaggaacgctgtggaccggatatgggcctttggaccacgcaggtatggaccaaacttc
ctccttaacagcgttgaggggtaccagagaccatccgtgtggcactgccttgagcgagag
aaaggagagaaagagggaggggagaaagctgaggccagcgccatccgagactttgacaac
agcgttgtcagcggtttccagctcgccaccctctctggtcccatgtgcgaggagcccctc
atgggcgtctgcttctctgtggagagatgggacatgaacttccccacccagcgcacccac
ctggactctgtgactgaagaagactccaactcccttgatgcatctgtttccaaaagcccc
ggtgaggctgcaggtcagcaagaggcctcaggcaaggcagggggagcgggtgagacacct
tcccaggcagagggtgccgtggctggggcgagccaggggagacgcagggcggatgttggg
gccgggctagtggactgctacgggccattctctggccagctcatagctgctgtgaaggag
gcttgtcggcacgcgttccaggccaaacctcagagactcatggctgctatgtacacctgt
gaaatcatggctacagcagaggtgttaggtcgtgtgtacggggtcctggggaagagggag
ggccgagtgttacaggaggagatgaaggaggggacggagatgttcatcatcaaggccgtc
cttcctgtggccgagagcttcggattcgctgacgagatacgcaagagaaccagtggattg
gctagtccacaactggtcttcagccactgggaggtgatctccagtgatccgtcctgggtt
cctaccacagaagaggagtacctccactttggagagaaggctgattccgccaatcaggct
ctgaaatacatgaacgctgttcgccggcgtaaaggactgtacgtggaggagaagatagtg
gagcacggcgagaaacagagaacactgagcaagaacaaatag
DBGET
integrated database retrieval system
