Salmo trutta (river trout): 115203507
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Entry
115203507 CDS
T08542
Name
(RefSeq) neogenin-like
KO
K06766
neogenin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04350
TGF-beta signaling pathway
stru04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115203507
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115203507
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
Tissue_fac
SusE
Sp38
V-set_CD47
EphA2_TM
Herpes_UL74
DUF4834
Motif
Other DBs
NCBI-GeneID:
115203507
NCBI-ProteinID:
XP_029624100
Ensembl:
ENSSTUG00000030256
LinkDB
All DBs
Position
12:complement(37824145..38056616)
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AA seq
1477 aa
AA seq
DB search
MAERGARLLLSLLCLTFLYPATTVSRHADKGTAARPFSPFWFSVEPWDTLAVRGAPALLN
CSAHSGDPASEPTAPQARVEWKKDGTFLSLAPDDGRRRVLPDGSLLISSVVHSKHNKPDE
GTYQCVATIDSLGTIASRTARLTVAGMPRFSSQPTAASIRLGDSQVLACDVNPDLVPLAR
WEREREPLELSSRLVQLPNGALVVSNASEADAGLYRCMVENAGPAKTSEEAQLYILPETG
EERELEFLVEPLPVTKVVGASLLLPCVVTGYPAPYVRWMVGDKLVEESEGKLELVGGGSL
LIYNLTEDAAGVYSCMADNTNNTIEAKAELTVQVPPEFLKRPANIYAHESMDIMFQCEVT
GSPAPTVKWVKNGDAVIPSDYFKIINEHNLQVLGLVKSDEGFYQCLAENDAGNVQSSAQL
IILEHDVALPTPPHPSLTPDTTDHVTPGSRGVANPTGPTPSAPRDVVASLVSTRFIKLTW
RPPAEPNGEDLTYSVYFNQEGTNRERILNTSRPGEMQVTIQNLMPDSKYKFRVVAHNKNG
LGESSAILKVATQGEVQVPGPAPNLQAVSTTPTSVTLSWDTPLTGNGDVLTYKVYYMEKG
LDLEQDIDAGALSYTLMGLKKFTEYSIRVVAFNKHGPGVSTGDIPVTTLSDVPSAPPQNL
TVEVHNSKSIMVRWQPPPPGAQNGEITGYKIRYRKGTRKSEAAETTGGTQLFQLIDGLER
GTEYTFRVSAITVNGSGPATEWSTAETFESDLDESRVPDIPSSLHVRPLVNSIVVSWTPP
ENQDMVVRGYTIGYGIGSPHAQTIKVDYKQRYYSIENLDPSSHYVITLKAFNNVGEGIPV
YESAITRPQSDPIDPDVDLYELFHAPYTPVPDPTPMLPPVGVQASVLSHDTIKVTWADNS
LPKNQKITDARYYTVRWKTNIPANTKLKTANTTNLSHMVTGLKPNTLYEFSVMVTKGRRT
STWSMTAQGTTFETIPSSSPKDVTVVSKELKPRTIIVNWQPPSEANGKITGYIIYYSTDV
NAEVHDWVIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVHFRTPKTSNLP
VKPGSNQPPLDHGFGSPHGKPGITGSGDNHILVIVVIISVGAFTIIVVVVGAFLCTRRTT
SHQKKKRAASKSSNSSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEPNPVMTDTPIPR
TSQDINPVDPSLDNSLLQRRNSYRGHESEDSISALAGRRGMRPKMMMPFDTQPPQPVISA
HPIHSLDNHHHHYHTGSVASPTRSYLHHHQGSAHLRPHACATPISCRDMVGSTESVRNTP
STEPLPPQAQPPCQAEHQHPDPEGSYQGSTATDDEPSASGSYCSAGQPPTAHVRPTHPLK
SFAVPANPAANFESPALPSTPLLTQTGPQLHSVKTASIGTLGRVRPPMPVTVPSAPDVPE
TSKMLEDVDSSYEPDELTEEMAHLEDLMKDLNAITTA
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcaaggttgctcctctctctcctctgtctcacctttctttacccg
gcgaccaccgtgtcaagacatgccgacaaaggcacggcggcgcggcccttcagccccttc
tggttctcggtggagccgtgggacacactggccgtgagaggtgccccggcactgctcaac
tgctcagcgcacagcggggaccctgcctcggagcccactgcgccccaggcccgtgtggag
tggaagaaggatggaaccttcctgagcctggcgccagacgacgggcggcggcgtgttctg
cctgacggctcgctgctcatctctagcgtggtgcactccaagcacaacaagcccgacgag
ggaacataccagtgtgtggccaccatcgacagcctgggaaccattgccagccgcaccgcc
cgcctcaccgtggcaggtatgccccggttctccagccagccgacagcagccagcatacgc
ctgggagacagccaggttctggcgtgcgacgtcaacccagacctggtgcctttagcccgg
tgggaacgtgagcgtgagcccctggagctgagctctaggctggtgcagctacccaacgga
gccctggtggtgagcaacgcttcagaggccgacgctgggctctaccgctgcatggtggag
aacgctgggcccgccaagaccagtgaagaggcccagctctacatactgccagaaaccgga
gaggagagagaactggagttcctggtagagccacttcctgtgaccaaagtggtgggggcc
agtttgctgctgccgtgtgtggtaacgggttacccagcgccctacgtccgatggatggtg
ggagacaagcttgtcgaggagagtgaggggaagttggagttggtgggaggagggagtctg
ttgatctacaacctgactgaggatgcagcaggcgtctacagctgtatggcagacaacact
aacaacactatcgaggccaaggcagagctcactgtacaagttccaccggagttcctgaag
aggccggccaacatctacgcccacgagtccatggacatcatgttccagtgtgaggtcaca
ggctccccggcccccaccgtcaaatgggtcaaaaacggagacgccgtcattcccagcgac
tacttcaaaatcattaatgaacacaacctgcaggtgctgggtctggtcaagtctgacgag
ggcttctaccagtgtctggcagagaacgatgcagggaacgtgcagtccagcgctcagctc
atcatcctagagcacgatgtagccctccccacccctccccacccctcactgactcctgac
actactgaccatgtaacgccaggctccagaggtgtggctaaccccactggccccactccc
tccgccccccgtgacgtcgtggcctcgctggtctccacccgcttcatcaagctcacctgg
cgcccgccggctgagcccaacggagaagacctcacctactctgtctacttcaatcaggag
ggtaccaacagggagcgtatcctgaacaccagtcggccaggtgagatgcaggtgaccatt
cagaacctgatgcccgactccaagtacaagttccgggtggtggcacacaacaagaacggc
ctgggagagagctctgccatcctcaaggtggccacccagggtgaagtgcaggttcctggc
cccgcccccaacctccaggctgtgtcgaccacacccacctccgtcaccctcagctgggac
acgcccctcactggcaacggcgacgtcctcacctacaaggtctactacatggagaagggt
ctggacctggaacaggacatagatgctggagctctgtcctacaccttgatgggtctgaag
aagttcacagagtacagcatcagagtggtggccttcaacaagcacggcccgggagtgtcc
acaggagacatccccgtcaccaccctctctgatgttcccagtgcccctcctcaaaacctc
actgtggaagttcacaactcaaagagcatcatggtccggtggcagcccccgccaccaggc
gcccagaacggcgagatcactgggtataagatccgttaccggaaaggaacgcggaagagc
gaggcggcagaaaccacgggaggcacccagctcttccaactcattgacggtctggagcgg
gggacagagtacacgttcagagtgtcagccatcacagtgaacggctcagggcccgccaca
gagtggagcacggcagagaccttcgaaagcgacttagacgagtccagggtgccggacatc
cccagctcgctacatgtgcgcccgctggtcaacagcattgtagtgagctggacgccgccg
gagaaccaggacatggtggtacgaggctacaccatcggctatggcatcggcagcccccac
gcccagaccatcaaggtggactacaagcagcgctactacagcattgagaacctagacccc
agctcccactatgtgataaccctgaaggccttcaacaacgtgggggaggggatccctgta
tatgagagcgccatcaccaggccacagtcagaccccatagaccctgatgttgatttgtat
gaactcttccatgctccatacacaccagtaccagaccccacccccatgctacctcccgtg
ggcgtacaggcctcggtgctcagccacgacaccatcaaggtgacctgggccgacaactct
ctgcccaagaaccagaagatcacggacgcacgctactacacggtgcgctggaagaccaac
atccccgccaacaccaagctcaagacggccaacaccaccaacctgagccacatggtgacg
ggcctgaagcccaacacgctctatgagttctctgtcatggtgaccaagggccggaggacc
agcacctggagcatgacggcccagggaaccacctttgagaccattcccagctcgtccccc
aaagatgtgactgtggtgagcaaggagctgaaaccacgtaccatcatagtcaactggcag
cccccctcagaggccaatggaaaaatcacaggctacataatctactacagtactgatgtg
aatgcggaggtgcatgactgggtgatagagccggtggtgggcaacaggttgacccatcag
atccaggagctgactctggacaccacctactacttcaagatccaggcccgtaactccaag
ggcatgggcccaatgtcagaggccgtacacttccgcacccccaagacctccaatttgcca
gttaaaccaggaagtaaccaaccacctcttgaccatggctttgggtctccacacggaaaa
ccaggaattacaggaagtggggacaaccacatcctggtcatcgttgtcatcatctctgtg
ggagcgttcaccatcatcgtggttgttgtgggggccttcctctgcacacgacgcaccacc
tcccaccagaaaaagaagcgggcggcctccaagtcgtccaacagctcccacaagtacaag
ggcaactccaaggacctgaagcctccagacctatggatccaccatgagcggctggagctc
aagcccattgacaagtcccccgagcccaacccggtgatgactgacacccccatcccccgc
acctcgcaggacatcaaccccgtggaccccagcctggacaacagcctgctgcagagacgg
aactcctaccgaggccacgaatcagaagacagcatatctgcactggcagggcgccggggg
atgcggcctaaaatgatgatgcccttcgatacgcagcccccccagcctgtgattagcgct
caccccatccattcccttgataaccatcaccaccattatcacacgggcagcgtggcatcc
ccgacacgcagctacctccatcaccaccagggcagtgcccacctgcgcccgcatgcctgc
gccacccccatctcctgtcgagacatggtgggctccacagagtcggtgaggaacaccccc
agcacagagcccctcccgccccaggcccagcccccctgccaagccgagcaccagcacccg
gaccccgagggcagctaccaaggctccacggccactgacgatgagcccagcgccagcggc
agctactgcagcgccggccagccccccaccgcccacgtgcgccccactcaccccctcaag
agctttgccgtacccgccaaccccgctgccaacttcgagtcgcctgccctgcccagcaca
cctctgcttactcagactgggccccagctccactcagtaaagacagcttccatcggcacc
ctgggcagggtacgcccccccatgccagtcacggtgcccagtgcgccagacgtgcccgag
accagcaagatgctggaggatgtagacagtagctacgagcctgatgagttgacagaggag
atggcccacctagaggacctgatgaaggacctgaacgctataaccacagcctga
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