Salmo trutta (river trout): 115203616
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Entry
115203616 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase arih1 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115203616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115203616
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
115203616
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
115203616
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
Rcat_RNF216
zf-C3HC4
zf-RING_2
zf-RING_14
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
UBA_ARIH2_N
Motif
Other DBs
NCBI-GeneID:
115203616
NCBI-ProteinID:
XP_029624308
LinkDB
All DBs
Position
12:44451769..44469221
Genome browser
AA seq
526 aa
AA seq
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MDSDEGYNYEFDEEEEECSEDSAEEDPEDDTLEVELDDPVVAGGERDECGETGGSGLGPG
QDEEDYRFEVLTAEQILQHMVECIREVNDVIQNPATITRILLSHFNWDKEKLMERYFDGN
LDKLFSECHVINPSKKSRTRLMNTRSSAQDLPCQICYLNYPNTYFTGLECGHKFCMQCWG
DYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITESKVKLKYQHLITNSFVECNRLL
KWCPAPDCHHVVKVQYPDAKPVRCTCGRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSET
SNWIAANTRECPKCHVTIEKDGGCNHMVCRNQSCKAEFCWVCLGPWEPHGSAWYNCNRYN
EDDAKAARDAQEVTRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAGVKAKMEEMQHHNMS
WIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENATEVLSGYLER
DISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgaggggtacaattatgaattcgacgaggaggaagaggaatgcagcgaa
gacagcgctgaggaggatcccgaagacgacaccctggaagtggagttggatgatcctgtt
gtggccggtggagagcgagatgaatgtggggagaccgggggcagtggcctagggcccggt
caagacgaggaggactatcggttcgaggttctgactgctgaacagatccttcagcatatg
gtcgagtgtatcagggaggtcaatgatgtcatccagaaccctgcaacgataacaagaata
cttcttagtcacttcaactgggacaaagagaaactgatggaaagatattttgatgggaac
cttgacaaattgttctcggaatgccatgtcatcaaccccagtaagaagtcgaggacacgg
ctgatgaacacgaggtcctctgctcaggatcttccctgtcagatctgctacctgaactac
ccaaacacgtacttcactggcctggagtgtggacacaagttctgcatgcagtgttggggg
gactacttgactaccaaaatcatcgaggaggggatgggacagacaatttcctgccctgct
cacagctgtgatatattggtggacgacaacacagtcatgagactgatcacagagtccaag
gtgaagttgaagtaccaacacttgattaccaatagttttgtagagtgcaatcgactgtta
aaatggtgcccagcgccagactgccatcacgtagtcaaagtccagtacccagatgctaag
cctgtgagatgcacatgtggccggcagttttgcttcaattgtggtgagaactggcatgat
cccgtcaagtgtaagtggttgaggaaatggatcaagaagtgtgacgatgacagcgagacg
tccaactggatcgcagccaatacaagggagtgccccaaatgccacgtgaccattgagaag
gacggcggctgcaaccacatggtgtgtcggaaccagagctgcaaggcagagttctgctgg
gtctgcctggggccctgggaaccacacggctctgcctggtacaactgcaaccgctacaat
gaggatgatgccaaggcagcgagggacgcccaagaggtaacacggtccagggcagccctg
cagaggtacctgttctactgcaaccgttacatgaaccacatgcagtcgctgcgcttcgag
cacaagctgtacgccggggtcaaggccaagatggaggagatgcagcatcacaacatgtcc
tggatcgaggtgcagttcctgaagaaggccgtggacgtgctgtgtcagtgtcgctccaca
ctcatgttcacctacgtcttcgccttctacctcaagaagaacaaccagtccatcatcttt
gagaacaatcaggctgacttggagaacgctacggaggttctgtctggatatctggagcgg
gacatctcgcaggactctctgcaggacatcaaacagaaagtacaggacaagtacagatac
tgtgagagtcggcggcgggtgctgctgcagcatgtgcatgagggctatgagaaggacctc
tgggaatacatagaagattaa
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