Salmo trutta (river trout): 115203619
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Entry
115203619 CDS
T08542
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115203619
Membrane trafficking [BR:
stru04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
115203619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
115203619
NCBI-ProteinID:
XP_029624314
Ensembl:
ENSSTUG00000002300
LinkDB
All DBs
Position
12:complement(44544739..44660084)
Genome browser
AA seq
1975 aa
AA seq
DB search
MRSLGEEVPPGYTCVESTPSGLSADLNNGSLMAPQIFLCYRRGRDKPPLTDLGVLYEWKE
RLKQGCHIIQTTPSGRPANISSTSSQRIYVTYRRATESQTYAALAVTDICVIIPGKGETP
PHTFCKVDKSLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPESVSL
FCLPMGATIEAWPAQTKYSLPVFSTFVLTGSSGEKVYGAAIQFYEPYSQDCLTDQQRSQL
GLPGLDHGPSSPATSPSTPAPGPRALHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPH
TLPIEKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSILLQNLG
PENAITLLVFAVTEHKILVHSLRPAVLTSVTEALVAMIFPFHWPCPYIPLCPLALAGVLS
APCPFIVGVDSRYFDLYDPPLDVSCVDLDTNTISHNEDKRALTWKILPKKACKNLMNVLN
NLYQQLVDGQQRPDGLLELSMSDCTELACGKSLHSLEMEIQEAFLRFMAAILKGYRSYLR
PITQAPSEKTTDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASL
AFFDDCVDKLYSADKGGKVDSDKPDETRLIEIDESQRSEHTVFITPPELPHLPDGEEHPL
CYSYAGFPVLSVDLFDPMEGLRPPASRLAARQSCPTSPAPMFRRTKQEIKLSQKLAKKYS
SIPQMWSKCLLCHCYGLWFICLPSYVKVCHSKVRALRTAYDVLRKMQDKKLQPPDEVCYR
VLMQLCGQYGQPVLAVRVLFEMKKAGVQPNAITYGYYNKAVLESTWPSSTRGGYFMWMKL
RNVVMGVAQFRQALRKQQPPPTQSPLSDGSDLDAVSHGSVDSSADTNTAEQGPYAPDSIK
VDPTDDRRSTVSRGDWGGVGSDTRSGHSHWGGFDLHSPRHSGEQSDLGYNSLSKEEVRRG
GPSPLDRDSTQDKDNKKESDYSSLSETESAKGSGDGLPQQDFPEVNGPFKRHNSGIVRGN
YPYDNAACEPKGSTSTDHVAGLLLSSSLNEIGVVETNSLRRRHLSTLEEGGGSGSSGGGG
GGGHDWQGVQGCRLSGDNRVVSGSSGTPVLGLGLHQGETDPARIAENLGADTNILQGTSF
SQTNRPRWLVLGGPEGVGAAGGKTRRCRRRDSPEDGEERDWSDEDKNNTDAIFDLEDLDL
DGPTTESVDKTSQSRKRTVQRSASYGGVGVASASRGTVKRTGIETGFDPLSLLAAESKSQ
GDREDDLEVEMDGVATPTCRRQDHLAREIEMYMNHMGSPLNSRTPSMDLQDSSSPLFFHP
PPPLITTPRRASLPHTSPLRTGGLPRSRTHHSPSPSQPARQRLWSSPPCPRSTPSPQPSP
YWERERDRDLGLLSPSLSSSSFALDQLLTPTLDVFKSSMFSAGKGVAEKASRWYSRLATS
YTMPTKDGNCDRLSVSSLGMDPDCSSLLDEEGLGDPDGSIISPQRNGPGPRRSPRRSPSR
RSPLRSRLDSPTHGQTGFPPPDCSDLGSSRYTSNTSVFQNYAMELLISSCSRCKTCDGLV
YDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDLRGPGRFFLKSSPSADEAVSSSY
SVSTGLDTGTSTLSTPCPTTVLSPLSPRITVEGCSGNNRLSSSRAQCIEIPTERCQGALS
PGSAMVRSVSAFDPMEEPTRLNHNVPTTGSLPSRLNEASDPLSVDMEWRLHHPEPVTVPY
LSPLVLWKELESLLENEGDPVITVSAVVDHHPIIYWNLVWSFRRLDLPSNLPGLILTSEH
CNRGSTVPRHWMSEDSKHVLIQILWDNLKLHRDLIQPFYILWNTQRLNCALLLDSVGYPL
CRPVSEAEHPFGEELLHSVVKSIQRNDVSRPMGQLLQLLGQSLGVKRQRSLYRDILFLCL
VALGKDNIDIDAFDREYKMAYDHLSPNLVKLTHNCDRPPSAGVMECRKTFGEPYL
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgctgggggaagaggtgcctcctgggtacacgtgtgtggaatccacgccgtcc
ggtctgtcagctgacctgaacaacggaagtctcatggcgccacagatcttcctgtgttac
agacgaggacgggacaaaccaccactcactgacctgggtgttctgtatgagtggaaggag
cggttaaagcagggttgccacatcatccagaccacgccctccggacgccctgccaacata
agctccacctcctcccagaggatctacgtgacgtatcgccgcgccacggagagccagacc
tacgccgccctggccgtcacagacatctgtgtcatcatccccggcaagggagagacgcca
ccacacaccttctgcaaggtggacaagagcctcaacagcagtatgtggggttcctctgtc
tatctgtgttacaagaagtctgtggccaaaaccaacaccatagcctacaaagcaggtctg
tttagcaggtatcctgaggaggactatgagtctttccccctgcctgagtccgtgtctctg
ttctgtctgcccatgggggccaccatcgaggcctggccggcccagaccaaatactccctg
cctgtcttctccaccttcgtactgaccggatcctctggagagaaggtgtacggtgcagcc
atccagttctacgagccctactcccaggactgtctgaccgaccagcagcgctctcagctg
ggtctgccggggctggaccacggaccctcttccccagccacttccccatccaccccagct
ccgggccccagggcgttacacaccaacaagtgtatctgtttgctgtctcactggcccttc
tttgacgccttccgcaagttcctcaccttcctctatcgatactccatctctggacctcac
accctgcccatcgagaagcacatctcccacttcatgcacaaggtccccttcccctcctcc
cagaggcccaggatactggtgcagctctctcctcacgacagcctgatgttaagccagcct
gtgtcatcccctctaccactcagtggtggtcggttctccatactgctgcagaacctcggt
ccggagaatgctataacgctcctggtgtttgctgtgacagaacataagatcctggtccac
tctctacggcccgctgttctgaccagtgtcactgaggctctggtggctatgatcttccca
ttccactggccgtgtccgtacatccctctgtgcccgctggccctggcaggagtcctctct
gccccctgccccttcatcgtgggtgtcgactcacgctactttgacctttacgaccccccg
ctggacgtcagctgtgtcgacctcgacacaaacaccatctcccacaacgaagataagaga
gccctgacctggaagatcctgccaaagaaagcctgtaaaaacctgatgaatgtgctgaac
aatctctaccagcaactggtggacggtcagcagcgtcctgatggcctattggagctgagt
atgagtgattgtacggagctggcctgtgggaagagcctccacagcctggagatggagata
caggaagccttcctcaggttcatggcggccatcttgaaaggctaccgctcatacctgaga
cccatcacccaggccccgtctgagaagactactgacgcctcctctctctttgacctgcaa
gggttcctgaagagcagagaccggtcccaccagaagttctactccctgatgaccaagact
cagatgttcatcagattcatagaggagtgctccttcgtctcagacaaagacgccagcttg
gccttcttcgatgactgtgtggacaagctctacagtgcagacaaaggaggcaaggtggac
agcgataagccagatgagaccaggctgatagagatcgacgaatcacagcgcagcgagcac
acagtcttcatcacacccccagaactaccccatctgcctgatggagaggagcacccactc
tgctacagctatgcaggtttcccagtgttgagtgttgatctgtttgaccccatggaaggc
ctccgaccccctgcctctcgcctggctgcccgacagagctgcccaaccagccccgcaccc
atgttcagacgcaccaaacaggagatcaagttgtctcagaagttagccaagaagtactct
tccatccctcagatgtggtccaagtgtctgctgtgccactgctacggcctgtggttcatc
tgtctgccatcatacgtcaaggtgtgccactccaaggtgcgggcgctacgcactgcctac
gacgtcctcaggaagatgcaggacaagaaactacagcctcccgatgaggtgtgttacagg
gtcttgatgcagctgtgtggtcagtacggccagccagtcctggcggtcagagttctgttt
gagatgaagaaggctggagtccaacccaacgccatcacctatggatactacaacaaggcg
gtgttagagtctacctggccttccagtaccagaggaggttacttcatgtggatgaagctg
aggaacgtggttatgggtgtggctcagttcagacaggcgctacgcaaacagcagcctcca
cccactcagagccctctgtcagatggcagcgacctggacgctgtgagtcacggcagcgtg
gatagctctgccgacactaacacggccgagcagggcccctacgcccctgactccatcaaa
gtagacccaactgacgataggcgtagcacagtcagccgcggggactggggcggtgtgggg
tcggacacccggtcgggtcactcacactgggggggttttgacctccactccccccgccac
tcaggggagcagtcagacctggggtataactccctctctaaagaagaggtgcgtagagga
ggacccagcccgctggacagggacagcacccaggacaaggacaacaagaaggagagtgac
tacagctccttgtcggagacagagagtgctaagggcagtggagacggtctcccccaacag
gacttcccagaggtcaacggtccattcaaacggcataattccggcatcgtccgcggcaac
tatccctatgacaatgcagcctgtgagcccaaggggtcaaccagcacagaccatgtagca
ggtctcctgttgagctcctctctgaatgagataggtgtggttgagaccaacagtctgagg
aggagacatctcagtacccttgaggagggaggtggcagtgggagtagtggaggaggagga
ggaggaggccatgactggcagggtgttcaagggtgcagactgagtggagacaacagggtt
gtcagtggtagcagtggcactccagtgttgggtctgggactgcaccagggagagactgac
ccagccaggatagcagagaacctgggggccgacaccaatatcctccaggggaccagcttc
agccagaccaacaggccgcggtggttagtcctgggagggccagagggggttggagcggcg
gggggtaaaaccaggcgctgcagacgtagagacagccctgaagacggagaggagagggac
tggagtgacgaggacaagaataacacagacgccatctttgatctggaggacctagatctg
gacggaccaaccacagagagcgttgataaaaccagccaatcacggaagaggacggtgcaa
cgtagcgccagctatggaggtgtgggtgtggcctcagcctcgcggggcaccgttaaacga
acggggatcgagacaggcttcgacccgctgtccctcctggcggccgagtccaagtcccag
ggggacagagaggacgacctggaagtagagatggatggggtcgcgacccctacatgccgg
cgccaggaccacctggctagggagatagagatgtacatgaaccatatgggttctcctctg
aacagccggacccccagtatggacctccaggactcctccagtcccctgttcttccaccct
cctcccccactcatcaccacccctcgacgggccagtctcccccatacctcccctctcagg
acaggaggattacctcgctccaggacccaccactccccctcgccctcccagcctgccaga
cagaggctctggtcctcacccccctgtccccgctccacccccagcccacagcccagcccc
tactgggagagggagagagacagggacctgggtttgctgtccccctctctgtcctcctcc
tccttcgccctggaccagctcctcacccccaccctggatgtgtttaagagcagcatgttc
tcggcagggaaaggtgtggcagagaaggctagtcggtggtactctcggctggccacctcc
tacaccatgcctaccaaggatggtaactgtgaccgtctgagtgtgtcctctctgggcatg
gaccctgactgctcctccttgttggatgaggagggcctgggggacccagacggctccatc
atctcccctcagagaaatggccccgggccccgtaggagcccaaggagaagcccatctaga
cgcagtcccctgaggagcagactggacagtcccacacacggacagacaggctttcctccc
ccagactgctctgatctgggctcatctcgctacaccagcaataccagtgtcttccagaac
tacgccatggagctgttgatctccagctgttctcgctgtaagacgtgtgacggtctggtg
tacgatgaggagatcatggcaggatggacggctgacgactccaacctcaacaccacctgt
cccttctgtgggaaccccttcctccctttccttaatgtagagatcagagacctgagagga
cctgggaggttcttcctgaagagcagtccgtcagcggatgaggctgtgtcatcgtcctac
tctgtgtccaccggtctggacaccgggacgtccactctgtccacaccttgtcccactact
gtcctgtctcctctctcacccaggatcactgtagagggctgctctggtaacaacaggctg
tcgtcgtccagggcccagtgtatagagatccctacagagcggtgccagggggccctgtcc
ccagggtcagctatggtgcggagtgtcagtgcctttgaccccatggaggaaccaactcga
ctcaaccacaatgtacccactacaggcagcctgcccagccgactcaacgaagccagcgac
cccctgagtgttgatatggagtggcgtctccaccacccagaaccagtcacagtaccctac
ctgagtcctctggtgctgtggaaggagctggagtccctgctggagaacgagggagaccct
gttatcacggtgtcagccgtggtggaccaccatcctatcatctactggaacctggtttgg
tccttcagacgtctggacctgcccagcaacctgcctggactcatactgacctcagagcac
tgtaacaggggatctacagtccctcgccactggatgtcagaggacagtaaacacgtgttg
atccagatcttatgggataacctgaagctgcaccgggatctcatccagccgttttacatc
ctctggaacacacagaggcttaattgtgctctgttgttagacagtgtgggctacccgttg
tgtcgtcctgtgagcgaggcggagcatccgtttggggaggagctactccacagcgtggtc
aagagcatccagaggaacgacgtctctcgaccaatgggacagctcctacagctgctgggg
cagagcctgggggtcaagaggcaaaggagtctgtacagagacatcctcttcctgtgtctg
gtggctctgggaaaggacaacattgacatcgacgcttttgaccgtgaatacaagatggcg
tacgaccacctcagccccaacctggtgaagctgacgcacaactgcgaccgtccgcccagc
gctggggtcatggagtgtcgcaagaccttcggagagccctacctctga
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integrated database retrieval system
