Salmo trutta (river trout): 115203630
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Entry
115203630 CDS
T08542
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115203630
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stru01007
]
115203630
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stru03016
]
115203630
Enzymes [BR:
stru01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
115203630
Amino acid related enzymes [BR:
stru01007
]
Aminoacyl-tRNA synthetase
Class I (G)
115203630
Transfer RNA biogenesis [BR:
stru03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115203630
Prokaryotic type
115203630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
Arc1p_N_like
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
115203630
NCBI-ProteinID:
XP_029624362
Ensembl:
ENSSTUG00000007209
LinkDB
All DBs
Position
12:complement(45142125..45158110)
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AA seq
822 aa
AA seq
DB search
MSSSGELAFDYGFLLHTSEEATATVALNEYLSSRSYLAGFSPSRVDQEVFELLHRPPAPQ
HVHALRWYRHIAALQRDTPSPDSSIKGKRVQPLWSAPAGSNLPKLRLYNSLTRTKELFVP
QNGNKVSWYCCGPTVYDASHMGHARSYISFDILRRILMNYFKYDVFYCMNITDIDDKIIR
RARQNYLLEQYREKKPAAAQILQDVLSARGPFQAKLAETTDPDKKQMLERLDSAVAAALG
PLQGAVESKAGEADVQHLAQVLLEKAKDLLSDWLDAQFGSQVTENSIFSLLPKFWEGEYH
NDMDALNVLPPDVLTRVSEYCPEIVDFVKKILDNGFGYESNGSVYFDTAKFDTSQKHAYG
KLVPEAVGDMKALQEGEGDLSVSADQLSEKRSQNDFALWKASKPGEPSWDSPWGKGRPGW
HIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHTGHLTIAG
CKMSKSLKNFITIKDALAKNTARQLRLAFLMHSWKDTLDYSSNTMESAVHYEKFLNEFFL
NVKDILRAPCDVTGQFEKWEAAEMELNESFYERKAAVHEALCDNVDTRSTMEEMRALVTQ
SNTYIASRKSSKLQPNRMLMKSIALYLTDMLKTFGAIEGFEPIGFPVGGDGHHVDMETTV
MPYLKVLSDFRESVRKIAREQNVTEVLQLCDVVRNDTLPELGVRLEDHEGLPTVVKLVDK
ETLLRERNEKKKMEDEKKNKKEEAAKKKQEQELAKLAKMKISPCDMFRSETDKYSGFDET
GFPTHDVEGKDLSKGQTKKLRKLYEAQEKLHQEYLQTNQNGC
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagctcgggagagttagcctttgattatggcttcttgctgcacacaagtgaggag
gccacagccaccgtggctctgaatgagtacctgagctcccgcagctacctggctgggttc
agcccctctcgggtggaccaggaggtctttgagctcctgcacaggcccccggccccgcag
cacgtgcacgctctgcgctggtacaggcacatagcagccctgcagcgggacacccccagc
ccagatagcagcataaaaggaaagagggtccagcccctctggtctgccccagccgggtcc
aacctgccaaagctgcgactctacaacagcctcacacgcaccaaggagttgtttgttccc
cagaatggaaacaaggtgtcgtggtactgctgcggacccactgtctatgatgcctctcac
atgggacatgccagatcttacatatcttttgatatcctccgaaggattctgatgaactat
ttcaaatatgacgtgttctactgcatgaacattacggacatagatgacaagatcatcagg
cgggccagacagaactacctcctggaacagtacagggagaagaagccagcggctgcccag
atactgcaggatgtccttagtgccagagggcccttccaggccaagctggccgagaccaca
gacccagacaagaaacagatgctggagaggctggactctgccgtcgctgctgccctggga
cccctgcagggggcggtggagagcaaggctggggaggctgacgttcaacacctggctcag
gtgttactggagaaggccaaagacctgctgtctgattggttggatgctcaatttggcagt
caagtgaccgagaactccatcttctctcttcttccaaagttctgggaaggggagtaccac
aatgacatggacgccttgaatgtccttcccccagatgtactcacccgcgtcagtgagtac
tgcccagagatcgtggactttgtgaagaaaatcctagacaatggcttcgggtacgagtcc
aacggttcagtttattttgacacagccaagtttgacaccagccagaagcacgcgtacggc
aagctggtacctgaagcggtcggtgacatgaaagctctgcaggagggagagggagatctg
agtgtctcagcagaccagctcagtgagaagaggtcgcagaatgactttgccctgtggaag
gcctctaagccgggggagccgtcctgggactcaccctggggaaagggacggcctggctgg
catatcgaatgttccgctatggctggttccatcttgggagagtctatggacatccacgga
ggagggtttgacctccgattcccccatcacgataatgagttggctcagtccgaggcttac
tttgagaacgaccactgggttcgctacttcctgcacactggtcacctgaccatcgcaggc
tgcaagatgtccaaatctctcaagaacttcatcaccatcaaggatgccctggcgaagaac
accgctcggcagctccgtctagccttcctgatgcattcctggaaggacaccctggattac
tcctccaacaccatggagtcagctgtccactacgagaaattcttgaatgagtttttcctc
aacgtgaaagacattctccgagctccctgtgacgtcaccggacagtttgagaagtgggag
gcagcagagatggagctcaacgagagtttctatgagaggaaggcagccgtccacgaggcg
ctgtgtgacaacgtggacacacgcagcaccatggaggagatgagggcgctggtgacccag
agcaacacctacatagccagtaggaagagctccaagctgcagcccaaccgcatgctgatg
aagagcatcgctctctacctgactgacatgctcaagacctttggggccattgaagggttc
gagcctattggattcccagtgggaggagatggtcaccatgtggatatggagaccacagtg
atgccctatctgaaggtgctgtcagacttcagagaatctgttcgcaaaattgccagagaa
cagaatgtgacagaggtgctacagctgtgtgacgtggtccgtaatgacaccttacctgag
ctgggggtgcgtctagaagaccatgaaggccttcccactgtggtgaagctggtggataaa
gagaccctgctgagggagaggaatgagaaaaagaagatggaggacgagaagaagaacaag
aaagaggaggctgccaagaagaagcaggagcaggagttggccaaacttgcgaagatgaaa
atctccccgtgcgatatgttccgctctgaaaccgacaagtattccggctttgatgaaacg
ggtttccccacgcatgatgtggaggggaaggatctcagtaagggacagaccaagaagctg
cggaaactctacgaggcccaggagaaattgcaccaagagtatctccagaccaatcagaat
ggctgctga
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