Salmo trutta (river trout): 115203644
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Entry
115203644 CDS
T08542
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115203644
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
LRR_14
Ig_3
LRR_9
ig
V-set
Ig_2
Ig_6
LRRNT
Syndecan
Motif
Other DBs
NCBI-GeneID:
115203644
NCBI-ProteinID:
XP_029624395
Ensembl:
ENSSTUG00000010505
LinkDB
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Position
12:complement(45744750..45784451)
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AA seq
621 aa
AA seq
DB search
MPITMISSLQRQTMRDLRLRGARSYPLFVLLLALQILAVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFQDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQISVIGPGSF
AGLANLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHTPASYRGRYIGELEHSYFQCDVPVIVEP
PADRNVTEGMAAELKCRTSSLTSVSWLTPNGSLVTHGAYKVRLAVLNDGTLNFTTVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETTETVDDSQTPALPPIGWVS
SSTTRGPPVQTRTTERTYTVSVLDLDGEGDRGLEEVMKTTKIIIGCFVAITLMAAVLLVI
FYKMRKQNHQQDPDGPASSMEVITVEEELAGVAAMETHLHLPPLEHYNHYNTYRSTYHHS
HTQEPLLIQASSKDNVQETQI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcacaatgatctcctccctccagcgccagacaatgagagatcttaggctgagg
ggggctcggtcctatcccctcttcgtgctgctgttggccctccagatcctggcggtggcc
ggcctggtgcgtgcccagacctgcccctctgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacccgccggagcctgcgcgatgtccccgacggcatctcaaccaacacacgt
tacctgaacctgcaggacaacctcatccaggtgatcaaggtggacagcttcaagcatcta
cggcacctggaaatcctgcagctgagcaagaaccacatccgcaacatcgagattggcgcc
ttcaatggcctggccagtctcaacaccctggagctgttcgacaaccgtctcaccaccatc
cccaatggggccttcgagtacctctccaagctcaaggagctgtggctaaggaacaacccc
atcgagagcatcccgtcgtacgccttcaaccgggtcccctccctgcgaagactggacctg
ggagagctcaagcgcctctcttacatctcagatggagccttccaggacctcagcaacctg
cgctacctgaacctgggcatgtgcaacctcaaagagatccccaacatcctacccttggtc
aggctggaggagctagagatgtcagggaaccagatctctgtcatagggcctggctctttc
gcagggctggcgaacttgcagaagctgtggatgatgcacgctcagatccagaccatcgag
aggaactccttcgacgatctccagtccctggtggagctcaacctggcccacaacaacctc
accctgctgccccacgacctcttcacccccctacaccgcctggagagagtccatctgcac
cataacccgtggaactgtaactgtgacatcctgtggcttagctggtggctgaaggagaca
gtgcctgccaacaccagctgctgtgcccgctgccacaccccagccagctacaggggtcgc
tacatcggcgagctagagcacagctacttccagtgcgacgtgcctgtcatcgtggagccg
ccggcagatcgcaacgtcacagagggcatggcggctgagctcaagtgcaggacgagctcg
ttgacctcggtcagctggctcacccccaacgggtctctggtgacccacggggcgtacaag
gtgcgcctggccgtcctcaacgacgggacgttgaacttcaccaccgtcaccatgcaggac
acggggacttacacctgcatggtgagcaacacggcgggcaacatctccgcctcggctgtg
ctcaacgttacctcggtggagaacagcggcgtcacctacttcaccacagtcaccgtggag
accacagagacagtagacgacagccagactcctgctcttccaccgattggctgggtatca
tcttcgaccaccagggggcctccagtccagaccaggaccacagagcggacctacaccgtc
tctgttctggatctggatggggagggggaccgcggcttggaggaggtgatgaagaccacc
aagatcatcatcggctgcttcgtggccatcacgctcatggccgccgtcttgctggtcatt
ttctacaagatgaggaagcagaaccaccagcaggaccccgatggccccgcctcctcaatg
gaggtcatcacagtggaggaggagctcgccggtgtcgctgccatggagacccacttacac
ctgcctccattggagcattacaaccattacaacacttacaggagcacctaccaccactcc
cacacacaggaacctttactgattcaagccagctcaaaagacaatgtgcaagagacccaa
atttga
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