Salmo trutta (river trout): 115203800
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Entry
115203800 CDS
T08542
Name
(RefSeq) interleukin-1 beta-like
KO
K04519
interleukin 1 beta
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04060
Cytokine-cytokine receptor interaction
stru04217
Necroptosis
stru04620
Toll-like receptor signaling pathway
stru04621
NOD-like receptor signaling pathway
stru04623
Cytosolic DNA-sensing pathway
stru04625
C-type lectin receptor signaling pathway
stru05132
Salmonella infection
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115203800
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115203800
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115203800
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115203800
04621 NOD-like receptor signaling pathway
115203800
04623 Cytosolic DNA-sensing pathway
115203800
04625 C-type lectin receptor signaling pathway
115203800
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115203800
09171 Infectious disease: bacterial
05132 Salmonella infection
115203800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
stru04052
]
115203800
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115203800
Cytokines and neuropeptides [BR:
stru04052
]
Cytokines
Interleukins
115203800
Glycosaminoglycan binding proteins [BR:
stru00536
]
Heparan sulfate / Heparin
Cytokines
115203800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL1
Motif
Other DBs
NCBI-GeneID:
115203800
NCBI-ProteinID:
XP_029624663
Ensembl:
ENSSTUG00000013720
LinkDB
All DBs
Position
12:complement(54349795..54353721)
Genome browser
AA seq
281 aa
AA seq
DB search
MDFDLADALPSSCSSMEFETEYHLPDAKSGPEMERCGLHAGLSLDLEVILQHRGGMRQVA
HLVIALHRMKNPFQKSDSTRTPMDMEGTDEQFCSIIMDNLVEECVMVPIQEPMGAVTKKE
KGTFEQIGSPEQYSLCDHHQKSLVYCHRTMELKAVTIQGGNNRRARFNLSKYSNASTTTT
NQALPVVLGIDKWKLSCSKQTDSATPVLQLECCEDQLTTIRAHEKTVRFLFYKNTTGFSL
TTFESAMYPGWFISTSPEPSQPIEMCQKQDARKLINFMVKN
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgatttagcagacgctctcccgagctcatgttcaagtatggagtttgaaacc
gaataccacctgcctgatgcgaagagtggaccagagatggagcgctgtgggctgcacgcg
ggcctgagcctcgacttggaggttatcctacagcatcggggaggcatgagacaggtggct
cacctggtgattgcgctgcataggatgaaaaaccccttccagaagtccgactccacacgc
actcccatggacatggagggcaccgacgagcagttttgcagcatcatcatggataacctg
gtggaagagtgtgtgatggtcccgatccaggagccaatgggagcggtgaccaaaaaggaa
aaggggacctttgagcagattggcagccccgagcagtatagcctgtgtgaccatcaccag
aagagcctggtttactgccacagaaccatggagctgaaggctgtcacaatccagggaggc
aacaaccggagagcgaggttcaacctctccaagtatagtaatgccagcaccaccaccacc
aatcaggccctgccagttgtcttagggatagacaaatggaaactctcctgctccaagcag
acagacagcgcaactcctgtcctacagttggagtgctgtgaggaccagttaacaaccatc
agggctcacgaaaaaacagttcgcttcctcttctacaagaataccactggcttctccctg
accaccttcgagtcggccatgtaccccggctggttcatcagcacctcaccggagccaagc
cagcccatagagatgtgtcagaaacaggatgccagaaagctcatcaacttcatggtcaaa
aactaa
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