Salmo trutta (river trout): 115203811
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Entry
115203811 CDS
T08542
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
stru
Salmo trutta (river trout)
Pathway
stru04137
Mitophagy - animal
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115203811
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115203811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115203811
03009 Ribosome biogenesis [BR:
stru03009
]
115203811
04131 Membrane trafficking [BR:
stru04131
]
115203811
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115203811
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115203811
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
115203811
Membrane trafficking [BR:
stru04131
]
SNARE
SNARE associated proteins
Others
115203811
Autophagy
Aggrephagy
Other aggrephagy associated proteins
115203811
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115203811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
AAA_28
Vps4_C
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
AAA_lid_PRS2_C
TsaE
ResIII
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
115203811
NCBI-ProteinID:
XP_029624688
Ensembl:
ENSSTUG00000014383
UniProt:
A0A673YRW7
LinkDB
All DBs
Position
12:54719473..54762721
Genome browser
AA seq
805 aa
AA seq
DB search
MASGGESKNDLSTAILKQKTRPNRLVVDESLNEDNSVVSLSQAKMDELQLFRGDTVLMKG
KKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDD
TVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAPDTV
IHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI
LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII
FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG
RFDREVDIGIPDATGRLEILQIHTKNMKLSDDVDLEQVANQTHGHVGADLAALCSEAALQ
AIRKKMDLIDLEDETIDAEVMSSLAVTMDDFRWALSQSNPSALRETVVEVPNISWEDIGG
LEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFIS
IKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVI
NQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILSANL
RKSPIAKDVDLDFLAKMTNGFSGADLTEICQRACKMAIRESIENEIRRERERQTNPLAME
VEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSSAPGA
GPSQGSAGGSRGTVFNEDNDDDLYG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggaggagaatcgaaaaatgatctatccacagcgattttaaagcagaagaca
aggcccaaccggttggttgtggatgaatctctcaatgaggacaacagtgtggtttctctg
tctcaggcaaagatggatgagttgcagctgttcaggggagacacagtgctgatgaaagga
aagaagagacgggagacggtatgcatcgtgctctctgacgacacctgctccgacgagaag
gtccgcatgaacagagtggtccgcaacaacctgagagtccgcctgggagatgtcatcagt
attcagccatgcccggatgtgaagtacgggaagcggatccatgttctgcccatcgatgac
actgtagaggggatcacagggaacctgtttgaggtctacctcaagccctacttcctggag
gcctacaggcccatcaggaaaggggacattttcctggtgaggggaggcatgcgtgcggtg
gagttcaaggtagtggagacggatcccaacccctactgcatcgtggccccagatactgtc
atccactgtgagggcgagcccatcaaacgagaggatgaggaggagtctctgaatgaggtt
ggctatgatgacattgggggtgtgaggaagcagctggcccagattaaggagatggtggag
ctgcccctgagacacccagcactattcaaggccatcggcgtcaagcctccaaggggtatc
ctgctgtatggaccccctggaacaggaaagacgctgattgcacgtgccgtggccaatgag
actggagccttctttttccttatcaatgggcctgagatcatgagtaaactggctggagag
tctgagagtaacctgaggaaggcctttgaggaggctgagaagaatgcccccgccatcatc
ttcattgacgagctggacgccattgcaccaaaaagagaaaagacacacggtgaggtggag
aggcgcattgtgtcccagctcctcacactcatggatggcctaaagcagcgcgctcacgtc
atcgtcatggcagccaccaacaggcccaacagcattgaccccgccctgaggcgatttggg
cgttttgacagggaggtggacatcggcatccctgacgccacaggcagactggagatcctc
cagatacacaccaagaacatgaaactgtccgacgacgtggacctcgagcaggttgccaat
cagactcacggccatgtgggtgctgacctggccgctctgtgctctgaagccgccctgcag
gccatcaggaagaagatggatctcatcgacctggaggacgaaaccatcgacgcagaggtc
atgagctccctggctgtcaccatggacgacttcagatgggctctaagccagagcaaccct
tcagccctgagagagacggtggttgaggtgcccaacatcagctgggaggacatcggaggt
ctggaggacgtcaagagggaactccaggagcttgtacagtacccagtggagcacccagac
aagttcttgaagttcggcatgactccgtccaagggcgtgctattctacgggcccccaggt
tgtggtaagaccctgctggcgaaagctatcgccaacgagtgccaggcgaacttcatctcc
atcaaaggacctgagctgctcaccatgtggtttggagagtccgaggccaacgttcgtgag
atcttcgacaaggctcgccaggccgccccctgcgtgcttttctttgacgagctggactcc
atcgccaaggcacgtggcggcaacgtgggtgatggtggcggagcggccgaccgtgtcatc
aaccagatcctgacagaaatggacggcatgtccagcaagaagaacgtcttcatcatcggc
gccaccaacaggcctgatatcatcgacccggccatcctgaggcccggaagactggaccag
ctcatctacatccccctgccagacgagaagtcccgcatcaacatcctcagcgccaacctc
aggaagtcacccatcgccaaggatgtggacttggatttcctggccaagatgaccaatggt
ttctctggcgctgacctgacagagatctgtcagagggcctgtaagatggccatcagggag
tccattgagaatgagatcaggagggagagagagcggcagaccaaccccttagccatggag
gttgaggaggacgaccctgtcccagaaatccgtaaagaccattttgaggaggccatgcgt
ttcgcccgccgctcagtcagcgacaacgacatccgcaaatacgagatgttcgcacagacg
ttacagcagagcagaggcttcggcagcttccggttcccctctagctctgcgccaggcgct
gggcccagccagggctctgctggtggcagcaggggtacagtcttcaacgaggacaacgac
gacgacctctatggttaa
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