Salmo trutta (river trout): 115203824
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Entry
115203824 CDS
T08542
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115203824
Membrane trafficking [BR:
stru04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115203824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
PH_13
C1_2
PHD_2
PHD
Motif
Other DBs
NCBI-GeneID:
115203824
NCBI-ProteinID:
XP_029624713
Ensembl:
ENSSTUG00000020358
LinkDB
All DBs
Position
12:55566068..55669156
Genome browser
AA seq
1808 aa
AA seq
DB search
MELNRGEVPLYGQLEVCAVLQVPDLEPEQTEFYVVLEGSRLAHVTVGKRTEDGKSLCFTV
PGHDLQETVSVTAYCHTEGRAKPCGGGASLDYVCDLPQEVAEYLLANSDCLSPQSHLEVL
RRVSAAPGEGNMEGDRSAGSGEHYLGKTDQEDGYGGGRPRPDPEVECRLREMDERITQAM
ANLDYPLEWSGKASQPREEHQPRDTLLHLSVRLGLLCLSRFLIGQPRGQRALTLLNEEGA
TPLQLAQNGGDHTLFMALATPPVPQRSPPVGVCSVWADRTCVLRVCPGSGTLNLTFLGGP
ESSVLDNILVLREKLTDHNILRQISALRGDVDVQMEDSDRVDVHTTDTSDGGLGRGLPVE
DLTLVVRGFEEQLVLSLDDDEELSTLQTVKSQTAHPRRTQRQFSHSAVADKSASMINGRS
QLSTEVDDLKAKVSVAGVTSDSSVTDSRVWDTVDSEVLLQQATVTPPPLPPFGLEEQQCP
FVSYSSSPLSSAADRALAGLNSLSHSYLTNQRGSPPLESPNLSPSPVALVIDSEEEGVRS
SGDDTSPDLTCTRTHSASSAGDPTPKKDMGDQKIRHRSYSYSSPKISLLPSRFSHDTSAQ
PATSDLSPDGVFHSVSHGRCRLQALSLSKSMSLLHPAKRREFSLSKQPQEKRELKFRKRA
QSADDEGSVELAESLQHLTLSEFLKEIEEEEWDKYNIPSKVASEKYKVIRTFSFLKSRMS
STRNKNKGKEKEREKEEKDKDRQQNGHRFSTGSCAGPTVCLVCDKPATGKELLHCSSCTL
MVHKGCNDFAPPCLKKLVKNRTASLPQMRDSPSSCLIATSASLPMMSQRDRRETASLPNP
LSRSVPSATDSRLTESPEVESDRRWGPGRSEELLQTTESSSTDSSLGEECVDTGLHSDLA
ADALDYEAESWSLTVEHKFCKKQDKRVVKRQDVIYELMQTEMHHLQTLCIMAEVFRRGMR
EEVQLDAGAVGRVFPCLDELLILHHDLFNSMRERRHSSAQPYGNRNYVIERIGDVLLQQF
SEENAERMKQVYGDFCSHHTEAVTFFKELQQHNKRFQTFIKQQSNNYLVRRREIPECILL
VTQRITKYPVLLERILQYTQEDSEEHRDLSRALVLIKEVIAAVDLRVSEFEQGQRLQDVL
NRMDNRSAAKLKNGHAFRKQDVLVPGRTLKHQGLLLWKTATGRLKDVLALLLTDTLIFLQ
EKDQKFIFAAVDQKPPVISLQKLIVREVANEERGMFLISASAAGPEMYEVHTSSKDERNT
WMRHIREAVESCPEDEEENTNESEEERRASEARAQKIQRLQESLSSQDHQICSSLEEKLQ
IYAELSALRGGTQEPHPEPRLLVQPHPEEVPRAAVLLTAALREAENMRTTLSSRTCSPSS
FCSPHRDPLSHPVSHPVSPANPPTLMDTPTDGEASHGDPDTRDGEWSASQALVLQSLTQP
HTGDTNNINLKVAQSVQSLTQLLYSLQAAVTIQDSFYEVQKLLLRESDRSGPCPLRPHPP
CLQEQEKHRNQEKRREEVAAAVRLQGQLRQERQRWERECQVRHSQQGELECRLEERERQC
HLEAERLKQEWEELEEQLGEYQQSLERLREGQRSVGKERERLETQQKLLQSWRHSRQRSL
PVMVIPLDGHQDSLPGQSGVHLDNAGSVFVNEAAFTTSKVLNNRHVHHHMHQNQRGGSLG
YGDDPRAHNSLNTILARSSQRHTLQPLSLSKAPTLHPDTNTPQCWAGGAGVTGYLYTTSG
RQGTEHTPNDINTHSYVRETWSSTATVAGQFQGVPHHGDHQLVLSSLVPLETESGDGEEG
GEENIVYL
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaacagaggagaagtgcctctatatggccaattggaagtgtgtgctgttctg
caggttccagatctagaaccagaacagacagagttctatgtggttttagaaggttccaga
ctagcccatgttactgtagggaaaagaacagaggatggaaagtctctgtgcttcactgtt
ccaggtcatgaccttcaggagactgtctctgtcacagcgtattgccacacagagggcaga
gccaagccctgtggaggcggggcctcgctggactacgtctgtgatttgccacaggaagtg
gccgagtacctgctagccaatagcgactgtctgagtccccagagccacctggaggtcctg
aggagggtttcagcagctccaggggaggggaacatggagggagacaggagtgctggctca
ggagagcactatctggggaagacagaccaggaggatggctatgggggtgggagacccaga
cctgatccagaggtggagtgtcgtctcagggagatggatgagaggataacccaggccatg
gccaacctggactaccctctggagtggagcggcaaggccagccaacctagagaagagcac
cagcccagggacactctcctccacctctccgtgcgtctgggtttgctctgtctctcccgc
ttcctgattggccagcccaggggtcagagggcactgaccctgctaaatgaggagggggcc
acacccctccagctggctcagaacggaggtgaccacaccctctttatggcgcttgccacc
ccccctgtcccacagaggtctccccctgtcggggtgtgctctgtgtgggcagataggact
tgtgtgctaagggtatgtcctgggtctggcacccttaaccttaccttcctggggggccct
gagagcagtgttctggacaacatcctggttctcagagaaaaactgacggaccacaatatc
ctcagacagatctcagcactgagaggtgatgttgatgttcagatggaggacagtgacaga
gtggatgtccatacaactgataccagtgacggaggtctaggcagggggctgccagtagaa
gaccttacactggtggttagaggttttgaagagcagctcgttctctctctggatgatgat
gaggaactttcaacattacaaacagtgaagtcccagacggcccaccccagacgaacccag
agacagttctcccactctgctgtggcggacaaatcagcctccatgatcaatggcaggagt
cagctctccacagaggtggatgacctcaaggccaaggttagtgttgccggggtaacgagt
gacagctctgtgactgacagcagggtgtgggacacagtggactcagaggtcctcctccaa
caggccaccgtcacccctccacccctacctcccttcggactagaggagcaacagtgcccc
ttcgtctcttattcttcttctcccttgtcctccgctgctgaccgagccctcgctggactg
aacagcctttcccactcatacctaaccaatcagagagggagcccacctctggagtcacct
aacctcagccccagtccggtagctctagtgattgacagtgaggaggagggggttcgtagt
agcggggacgacacctccccagacctcacctgtacacgcacacactctgcctcctcagcc
ggtgaccccacccccaaaaaggatatgggcgaccagaagatcagacaccgctcctactcc
tactcctcccccaagatcagcctgctgccctcccgcttctcccatgacacatcagcccag
cctgcgacatctgacctcagcccagatggcgtgttccacagtgtgagccacgggcggtgt
cgccttcaggccctctctctgtctaaatctatgtctctactccaccctgctaaacggaga
gagttcagcctatcaaagcaacctcaagaaaaaagggagttaaagttccgtaagcgtgcc
cagtctgcagacgacgagggcagcgttgagctggcagagtccctccaacacctcaccctc
tcagagttcctcaaagaaattgaagaagaggagtgggacaagtacaacatcccttccaag
gtggcgtcagagaaatacaaagtgattcgtaccttcagcttcctcaagagccggatgtcg
agcacacgcaacaagaacaaggggaaggagaaggaaagggagaaggaggagaaagacaag
gacaggcagcagaatggacatcgcttctccacggggtcctgtgctggacccactgtctgt
ctggtctgtgacaaacctgctactggcaaggaacttttgcactgctccagttgtacactc
atggtccataagggttgtaatgactttgctcccccttgtctaaagaaacttgtgaagaac
cgaacggcatccctcccgcagatgcgagacagtccctcttcatgtctgatcgccacctca
gcctctctacctatgatgagccagagggacaggagggaaacagcctccctccccaacccc
ctctccaggagcgtcccctctgccactgacagcaggcttaccgagagtccggaagtggag
tctgacaggagatggggtcctggccgatcagaggagctcctacagaccacggagtcgtcc
tccactgactcctccctcggagaagaatgtgtggacaccggtcttcacagcgacctggct
gctgatgctctggactacgaggctgagtcttggagtctgacggtggaacacaagttttgt
aagaagcaggacaaacgggtggtcaagagacaggacgtcatctatgagttgatgcagaca
gagatgcaccacctccaaactctgtgcatcatggctgaggtcttccggcgagggatgagg
gaggaggtccagctggacgccggcgccgtggggcgtgtcttcccctgtttggacgaactc
ctcatcctccaccacgacctcttcaactccatgagggaacgccgccacagctccgcccag
ccatacgggaacaggaactacgtcatagaacgcatcggcgacgttctgctgcaacagttt
tctgaagagaacgcagagaggatgaaacaggtgtatggagacttttgcagccatcacact
gaggcagtcaccttcttcaaagagctacagcaacacaacaaacgatttcagaccttcatc
aagcaacaaagtaataactatttggtgcggaggagagagatcccagaatgcatcttgttg
gtgacccagaggattactaagtaccctgttctgttggagaggattctacagtacacccag
gaggacagtgaggagcacagggacctctccagagctctggttttgatcaaggaggtgatc
gcggctgtagacctgagggtcagtgagtttgagcagggtcagaggttacaggacgtccta
aaccggatggacaaccgtagtgctgccaagctgaagaacggacacgcctttaggaagcag
gatgttctggtgccaggccggaccctcaaacaccagggcctgttactgtggaagaccgcc
accggacgactcaaagatgtcctggctctccttctcacagacacactgatcttcctacag
gagaaagaccagaagttcatattcgctgctgtggaccagaagcccccagtgatctctctg
cagaagctgattgtcagggaggtagccaatgaggagagagggatgtttctgatcagtgca
tcggccgcgggtccagagatgtacgaggtccacacctcctcgaaagacgaacgcaacacc
tggatgagacacatccgagaggctgtggagagctgtccagaggatgaggaggagaacact
aacgaatcggaggaggagagaagagcatctgaagccagagcccagaagatacaaagacta
caggagagcctgtccagtcaggaccatcagatatgttctagtctggaggagaagctacag
atctatgctgaactgtctgcactgaggggcggcacccaggaaccacaccctgagccacgc
ctactggtccagccacacccagaggaggtgccccgggctgcagtactgctcactgccgcg
ctccgagaggctgagaacatgaggaccactctgtcctccaggacctgctctccctccagc
ttctgcagccctcacagggaccccctgtcccaccctgtgtcccaccctgtgtccccagcc
aaccctcctaccctcatggacacccccacagacggcgaagcctcacatggggaccctgat
accagggacggggagtggtcagcctcccaggccctcgtactgcagtcactgactcaaccc
cacactggggacactaataatatcaaccttaaggtggctcagagtgtccagagcttgacc
cagttactctacagtctgcaggcagcggtaaccatccaagatagtttctacgaggtacag
aagcttctcctccgtgagagtgaccgctccggcccctgcccgctgcgaccacaccccccg
tgtctccaggagcaggagaagcatcggaaccaggagaagcgccgtgaggaggtggcggcg
gcggtgcggttacagggtcagctgcgccaggagaggcagcggtgggagagggagtgccag
gtgcgccacagccaacagggggagctggagtgcaggctagaggagagggagagacagtgt
cacctggaggctgagaggctgaagcaggagtgggaagagctcgaagagcagctgggggag
taccagcagagcctggaaaggctgagggagggccagagaagcgtggggaaggagagggag
aggctggagacccagcagaagctgctacagagctggagacacagccgacagaggagcctg
cctgtcatggtcataccactggatggtcatcaggactcacttcctggtcagtccggcgtc
catcttgacaatgccggctcagtgtttgtcaacgaggcagcgttcaccacgtcgaaggta
cttaacaaccgccacgtgcaccaccacatgcaccagaaccagcgaggtgggtccctggga
tacggagatgaccctcgagcccacaacagcctgaacaccatactggcccgctccagccag
agacacacactccaacccctctccctctccaaggctcccacgctccaccctgacacaaac
acaccccagtgctgggcggggggtgccggtgtcactgggtacctctacacaacctcaggt
agacaggggacagagcacacacccaacgatataaacacacacagctatgtgagggagaca
tggtcctcgacggcaactgtggctggacagtttcagggtgtacctcaccatggcgaccac
caactggtcctctcctccttagtccccctggagacggagagtggggatggggaggagggg
ggagaggagaacattgtgtacctctga
DBGET
integrated database retrieval system
