KEGG   Salmo trutta (river trout): 115203878
Entry
115203878         CDS       T08542                                 
Name
(RefSeq) polyubiquitin-B
  KO
K08770  ubiquitin B/C
Organism
stru  Salmo trutta (river trout)
Pathway
stru04120  Ubiquitin mediated proteolysis
stru04137  Mitophagy - animal
stru04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115203878
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    115203878
   04137 Mitophagy - animal
    115203878
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    115203878
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:stru04121]
    115203878
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115203878
Ubiquitin system [BR:stru04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   115203878
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   115203878
  Exosomal proteins of other body fluids (saliva and urine)
   115203878
  Exosomal proteins of colorectal cancer cells
   115203878
  Exosomal proteins of bladder cancer cells
   115203878
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 115203878
NCBI-ProteinID: XP_029624812
LinkDB
Position
12:complement(59497708..59499801)
AA seq 305 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGN
NT seq 918 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagacacttaccggaaagaccatcaccctagaggtcgagcccagt
gacaccatcgagaatgtcaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatcttcgctggcaagcagctggaagatggtcgcactctctccgactacaac
atccagaaggagtccaccctccatcttgtgctccgtctgaggggaggtatgcagatcttt
gtgaagacccttactggcaagaccatcaccctagaggtggagcccagtgacaccatcgag
aatgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
ttcgctggcaagcagctggaagatggtcgcactctctccgactacaacatccagaaggag
tccacactccatcttgtgctccgtctgaggggaggtatgcagatcttcgtgaagaccctg
actggtaagaccatcaccctggaggttgagccgagtgacaccatcgagaatgtcaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatctttgctggcaag
cagctggaagatggtcgcacgctctctgactacaacatccagaaggagtccaccctccat
cttgtgctccgtctgaggggaggtatgcagatcttcgtgaagaccctgactggtaagacc
atcaccctggaggttgagccgagtgacaccatcgagaatgtcaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatcttcgctggcaagcagctggaagat
ggtcgcactctctccgactacaacatccagaaggagtccactcttcatctggtcctgcgt
ctccgtggtggcaactaa

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