Salmo trutta (river trout): 115203917
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Entry
115203917 CDS
T08542
Name
(RefSeq) transcription factor 7-like 1-B isoform X1
KO
K04490
transcription factor 7-like 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04310
Wnt signaling pathway
stru04520
Adherens junction
stru04916
Melanogenesis
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115203917
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115203917
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
115203917
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115203917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115203917
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
115203917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115203917
NCBI-ProteinID:
XP_029624866
Ensembl:
ENSSTUG00000006221
UniProt:
A0A673WW56
LinkDB
All DBs
Position
12:60605053..60628357
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AA seq
626 aa
AA seq
DB search
MPQLDGGGGDDLGANDELISFKDEGEQEEKTAENVSSERDLDDVKSSLVNETENNSSSSD
SEQAGSHRRPQQHRPDWESYVRQREFFAEALRQQHDSGLFKASPYAGYPLLMIPDLGNLA
NLSHLGNLGNPYLSPGALSPGARTYLQMKWPMLDVPGTSALKDPRSTSSAHMSNKVPVVQ
HGHLPPFSPLLSYSPDPFPPRTPPPHLSPDTGLPRTPHPAELSPYYPLSPGGMGHMTHPL
GWLPGQSMYGIPAGGFRPSYPAALAMNSSMSSLVASRFSPHMVPSLQTSVPHPAIVSTAI
KQEPRDGNRHGCGVSMGDREKEEEKKPHVKKPLNAFMLYMKEQRPKVVAECTLKESAAIN
QILGRRWHSLSREEQSKYYDMARKERQLHSQLYPGWSARDNYGKRKKRKRDGRPETAPDG
QITHTQSAAPEEHFSPQPKKSCVSYGTQERPSVSHTHLTHTHLSQASPASSLDSPATPTT
ALASPAAPAPTHTEHTHSHSEHTHPEQVQPLSLTTKPPRPHSHRETHGQTYTHIQSHTHP
HLFTHTHLPFTTKTTSSQSSSSPSSSHPPFSPHMSSSSNQTPPLLTGPIPFASGLAPTTS
IHQSTMSSHHAMLQSQPLSLVTRNNH
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctggatggaggaggaggggatgatttgggtgcaaacgacgagttaatttcg
tttaaagacgagggggagcaggaggaaaaaacagccgagaatgtgtcctctgagcgggac
ctggacgatgtcaagtcctcgctggtcaacgagacggagaacaacagcagttcgtctgac
tccgagcaggcaggcagtcacagacgtccccagcagcacagaccagattgggagagctat
gtcaggcagagagagttctttgcagaagctctgagacagcaacacgacagtgggttgttc
aaggcatctccatatgctggctatcccttactgatgatccctgacctgggtaacctagcc
aacctgagtcacctggggaaccttggcaacccctacctctctcccggagccctctcaccc
ggcgccaggacgtatttacagatgaagtggcccatgctggatgttcctggaacctctgct
ttaaaagaccctcgctccacctcctccgctcacatgtccaataaggtaccagtggtgcag
cacggtcatctgccccccttctctcccctcctgtcctacagtccagaccccttccccccg
cggacaccccctcctcacctctcacctgacacaggtcttccccgcactccccacccagca
gagctctccccctactaccctctctctcctggaggcatgggacacatgacacatcctttg
ggctggctgccgggccagtctatgtacggtattccagcgggggggtttagaccatcctac
cctgcagctctcgccatgaactcttctatgtccagcttggtggccagtcgtttctcgccc
cacatggtcccgtccctgcagacgtctgtccctcaccctgccatcgtttccacggcgatc
aaacaggaaccaagagacggcaaccgtcacgggtgtggcgtatccatgggggacagagag
aaagaggaggagaagaagccccatgtgaagaagcctctgaacgcctttatgctgtacatg
aaggagcagagacccaaggtggtggcagagtgcacgctgaaggagagcgctgccatcaac
cagatactgggacgcaggtggcactctctatctcgtgaggagcagtcaaaatactacgat
atggcccgcaaagagagacagctacattcccaactctaccctggatggtcagctagagac
aactacgggaagagaaagaagaggaagagagatggcaggccagagactgctccagatgga
caaataacacacacccagtctgctgctccagaggagcacttctctccacagcccaagaag
tcatgtgtgtcgtatggaactcaggagaggcccagtgtttcacacacacacctgacacac
acacacctgtcccaggctagtcccgcctcctccctggactctccagccacgcccaccact
gctctggcctcccctgccgctcctgcacccacacacactgaacacacacactctcactct
gagcacacacatcccgagcaggtccagcccctctccctcaccaccaaaccccctcgccca
cactcgcacagggagacacatggtcagacttacacccacatccagtcgcatacacaccca
cacttgttcactcacacacacctgcccttcaccactaagactacttcatctcaatcctct
tcctccccctcttcctctcatcccccattttctccccacatgagctcatccagtaaccag
actccgccgctccttactggaccaatccccttcgcctctggcttagcccctaccacctcc
atccaccaatcgacgatgagctcccatcatgccatgctccagtcccagcctctctccctt
gtcaccagaaataatcattga
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