Salmo trutta (river trout): 115203936
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Entry
115203936 CDS
T08542
Name
(RefSeq) homeobox protein orthopedia B-like isoform X1
KO
K24901
homeobox protein orthopedia
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115203936
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115203936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Harakiri
Motif
Other DBs
NCBI-GeneID:
115203936
NCBI-ProteinID:
XP_029624894
Ensembl:
ENSSTUG00000010242
LinkDB
All DBs
Position
12:61802222..61806972
Genome browser
AA seq
343 aa
AA seq
DB search
MLSHADLLDARLGELSSPNSGLQLYWMKDAAAELLGHREALKCRLGGGVGSDPGHSGELA
PGPDTVEGATMLPGDDINNGGSNPSGMQVNSKEQQDKQQQNNSSQSGGSQSQSQKQKRHR
TRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVTESRVQVWFQNRRAKWKK
RKKTTNVFRNPGTLLPTHHGLHSQFNSAAAAAAAMGDSLCSFHANDTRWATAGMPGVSQL
QLPPALGRQHQHAMAQSLSQCSLSGPPPNSMGLSNMSSNGSGLQSHLYQNPFPGMVPASL
SGPTNVTGSPQLCSSPENDVWRGTSIASLRRKALEHTVSMSFT
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgcacgccgacctcctggatgctcgcctcggtgagttatcatcgccaaactcc
ggtcttcaactctactggatgaaggatgccgcggcggagctactgggtcacagggaggct
ctgaagtgcagactaggcggtggagtggggtctgaccccggccactccggcgagctagcc
ccgggcccagacaccgtggagggggctaccatgctccctggagacgatatcaacaacgga
ggatccaacccttccggcatgcaggtcaacagcaaagagcaacaggacaagcagcagcag
aataactccagccaatccggaggaagtcagagtcagagtcagaaacagaagcgccaccgg
acccggttcaccccggcccaacttaacgaactggagcgcagcttcgccaaaacgcactac
ccagacatcttcatgagggaggaactggccctacggatcggcctaacggaatctcgcgtg
caggtaacggaatctcgcgtgcaggtttggttccagaaccgacgtgcgaagtggaagaag
cgcaagaagaccacgaacgtttttcgcaacccggggacgctgctgcccacccaccacggc
ctgcacagccagttcaactctgccgctgccgccgccgcggccatgggcgacagcctatgc
tccttccacgccaacgacacacgatgggctacggcagggatgccaggcgtctctcagctg
cagctccccccagccctgggtcgccagcaccagcatgccatggcgcagtccctgtcccag
tgtagcctgtccggtccgccgcccaactccatggggctatccaacatgtcgtcgaacgga
tccgggctccagtctcacctctaccagaacccgttccctgggatggtccctgcctccttg
tccggtcccaccaacgtgacgggctcgccccagctgtgtagctccccagaaaatgacgtc
tggagagggacgagcatcgcctccctgcggcgcaaagcgctggagcacacagtatccatg
agtttcacttag
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