Salmo trutta (river trout): 115203982
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Entry
115203982 CDS
T08542
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115203982
04020 Calcium signaling pathway
115203982
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115203982
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115203982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
115203982
NCBI-ProteinID:
XP_029624989
Ensembl:
ENSSTUG00000005485
LinkDB
All DBs
Position
12:64495896..64705955
Genome browser
AA seq
2395 aa
AA seq
DB search
MARFAEDLPTRYGAGGGGRGAPGAGRGGARAGGPPGGQRMYKQSMAQRARTMAIYNPNPV
KQNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYLILATIIANCIVLALEQHLPASDKT
PMSERLDDTEPYFIGIFCFEGGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGS
DFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGVEF
YMGKFHSTCFTVDTGERAAAFPCGTEAPARMCPNGTECTEYWIGPNYGITNFDNILFAVL
TVFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERER
VEKRQDFLKLRRQQQIERELTGYLEWICKAEEVLLAEEDENAEEKSPLDGAWYKRKQNLP
VLKRGKVKKSKNDLIGAEEGEDHFTDMSSVVPPGSPFGRASVKSIKLDSSSYFRRKERRM
RFFIRRMVKAQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTTALYLAEFVFLGLFLSEMSL
KMYGLGARNYFHSSFNCFDFGVIIGSILEVVWSMIKPGASYGISVLRALRLLRLFKFTKY
WNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDTFPA
AILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIAVDN
LANAQELTKDEEKQEEEANKKLALQKAMEVKEVSPMSAANISIAVFVKQNRDVLSRSSSV
SSVHSPKDQQRASKMMSVWEQRTNQLRQNNLRASSEALFNELDPEERLRVSSALHLHPDM
KTHNDRPLVVEPGNGDKPPPPKEDRDGADPQQEGGDPHGPQPRKHHRHRERNGENGESRH
HTHHSRSRDHYHPDGPRPKEGKVERSHSREGGQGHRHHHQAGSPEEGVNGGGEEREHRHH
HSHRQPREGNGALANGARVERKGRGHKEGNGEGNGERRRYRSRMVRAQSTLDGEECRENG
KRDGDRDQGHRASLDAQGESLATSPVQPPAGLQAGEKQEDADNQKNSHRASQAGLNSNTV
HIPVTITAPPRETTIIPMNNIDCESLPQNEEKKNLEEDEEELKNGPKHILPYSSMFVFGQ
TNPVRRLCHYVVNLRYFEMCILSVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFT
FEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSSFMGGTKGKDINTIKSLR
VLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYC
TDESKGLEKDCRGKFLDYDRDDVAAQDREWRKYEFHYDNVLWAFLTLFTVSTGEGWPMVL
KHSVDATYEDQGPSPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECS
LEKNERACIDFAINAKPLTRYMPADKQSFQYKMWQFVVSPPFEYSIMTMIALNTVVLMMK
FHGAPELYEAMLKYLNIVFTALFTLECILKIIAFGPLNYLKAAWNVFDFVTVLGSITDIL
VTEIKTDKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFI
YAIIGMQVFGNIELNEESAINHHNNFQTFFQALMLLFRSATGEAWHEIMLSCLSNRPCDK
LSGSGGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFI
RVWAEYDPAACGRMTYLDMYEMLRHMSPPLGLGKKCPPRIAYKRLVKMNMPIADDNTVHF
TSTLMALIRTALEIKLASGVLAQRLCDADLRKEISRVWPNLPQKTVDLLVTPYKIDEFNE
LICPFAVVNRELTVGKVYAALMIFDYYKQNRAKRLEQQLGLDFTGTIKNKKGAAFFRPMM
PMTHMQEETPITTAKPPPPSQPEHQPEPPPATTSLTNGDTVPSPRSAMKESVSGDQLSQE
GQRSSTSSRTLQRGQSEDVPYSIKPQESVEMRQVENGADLEGYFGLEGHGRAASMPRLDS
QYYRNHPRHLPGTYLAPIPDISPIRRSASTLASQRPREVSLRDYTLERPSQAQAQSSSAP
GQAQDRPYHHHHHHRCHRRRDKDRDKKQKSLDRTSSVQPSSIAGLPADPAVEGLSRERAR
ERDRGRPQERRHHSAAGEKQRYYSCERYGGREHYHTKSAGPSRSTSPGETHDLGLFKQSI
GMAKGSQVVLTSGFGTPCRGRRQLPQTPLTPRPAVAYKTANSSPVQFGATGHKSSLSRGL
SEHSALLESPAMPVTRIGSDPNLSPQPRGAPPRSLPEEPDDFQDAVSTHGGGGGRSPRTS
ASASHGATEPSSAPAPQGRAGVPNGYHFTLGVNAGSSSSTRGTGSFREKEEDDWC
NT seq
7188 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgcagaagatctacccacccgctatggagctggaggaggaggcagaggt
gcgccgggcgcaggcagagggggcgcccgagcaggtggtcctccaggcggccaaaggatg
tacaagcagtcgatggctcagagagccaggacaatggccatatacaaccctaacccagtc
aaacagaactgcttcactgtcaaccgatccttgttcatctttcgagaggacaatctcatt
aggaaatatgctaagcgaataaccgagtggcctccgtttgagtacttaatcctggccacc
atcatcgccaactgcatcgtactggccctggagcagcacctaccagccagtgacaagaca
cccatgtcagaacgcctggatgacacagagccctactttattggaatattctgtttcgag
ggcggcattaagatcatcgccttgggctttgcattccacaaaggctcatacctccgcaac
ggctggaacgtaatggactttgtggtcgtcctcactgggatcctggctacggtgggctca
gactttgacctgaggactctgcgggcggtgagagtactcagacctctcaaactggtgtct
ggcatccccagtcttcaggtggtattgaagtctatcatgaaggccatggtgcctctgctc
cagataggcatgctgctcttcttcgccatactcatgtttgccatcatcggagtggagttc
tacatgggcaagttccactccacctgcttcactgtcgacactggtgagcgtgcggcagcg
ttcccctgtggtacggaggccccagccaggatgtgtcctaacggtacagagtgtacagag
tactggatcggccccaactatggcatcaccaactttgacaacatcctgtttgccgtgctc
accgtcttccagtgcatcaccatggagggatgggtggacatcctctacaacgccaatgat
gcctcggggaacacctggaactggctctacttcatccccctcatcatcatcggatcgttc
ttcatgctcaacttggtcctgggtgtcttatcaggggagtttgccaaagagagagagcgt
gtggagaagaggcaggactttctgaagctgcgcagacagcagcagatagagagagagctg
acggggtacctggagtggatatgcaaggcagaggaggtgctgctggcggaggaggatgag
aacgcggaggagaagtcccctctggacggtgcgtggtacaagaggaaacagaacctccca
gtgttgaaacgaggcaaggtcaagaagagtaagaatgacctgatcggtgctgaggaggga
gaggatcacttcactgacatgtcctctgttgtgcccccaggctcaccgtttggccgggcc
agcgtgaagagcattaagctggacagctcatcctatttccgccgcaaggagaggagaatg
cgtttcttcatccgtcgcatggtgaaagcccagagcttctactggacagtcctgtgtctg
gtggggctcaacacactgtgtgtggccatcgtccactatgaccagcctgagtggctcacc
actgccctgtacctggcagagtttgtgttcctgggtctgttcctgtctgagatgagcctg
aagatgtacggcctgggagccaggaactacttccattcctctttcaactgcttcgacttt
ggtgtgataatagggagtatactcgaggtggtgtggtcgatgatcaaaccaggggcatcc
tatggcattagtgtactgagggctcttcgtctgctcaggttattcaagtttaccaagtac
tggaactccctgaggaacctggtggtgtctctgctcaactccatgaagtccattatcagc
ttgctcttcctcctcttcctcttcattgtggtctttgctctgctgggcatgcagctcttt
ggaggacagtttaatttcgaagaggagacgccgacgaccaacttcgataccttcccggcg
gccattctcaccgtcttccagattctgactggcgaggattggaatgcagtaatgtatcat
ggcattgagtctcaggggggcgtgcggcggggaatgttctcctcggtctacttcatcgtc
ctcacactctttggaaactacactctcctgaacgtcttcttggctatcgccgtcgacaac
ctcgccaatgcacaggagctcaccaaggatgaggagaagcaggaggaagaagccaataag
aagctggccctgcagaaggccatggaggtgaaggaggtcagccccatgtcagcagccaac
atctccattgccgtttttgtaaagcaaaatcgagatgtactctctcgcagctcgtccgtc
tccagcgtacattcacctaaggatcagcagagagccagtaagatgatgtcggtgtgggag
cagcgcactaaccagctgcgtcaaaacaacttgagggccagctccgaggctctgttcaac
gagctggacccagaggaacgcctgcgtgtctcctccgccctccacctgcaccccgacatg
aagacccacaacgaccgccccctagtggtggagccaggcaatggggacaaaccaccaccc
cccaaggaggacagagacggagcagacccccagcaagaggggggagacccccacggccca
cagccacgcaagcaccaccgccaccgggagaggaatggggagaacggggagagcaggcat
cacacccaccacagccgcagtagggaccactaccacccagacgggccccggcctaaagaa
ggaaaggtggagaggagccatagtcgagaggggggccagggccacaggcaccatcaccag
gcggggtccccggaggaaggagtgaacggagggggggaggagagggagcaccgccaccac
cactcccacagacagccccgagaggggaacggggccctggctaacggggccagagtggag
aggaagggccgggggcacaaggaggggaacggagaggggaacggagagaggaggagatac
cgctcccgcatggtcagggcccagtcaactctggatggagaggagtgcagagagaacgga
aagagagatggagacagggaccagggacacagagcttcactggacgctcaaggggagagc
ctggccaccagccctgtgcagcctcctgcaggtctacaggctggagagaagcaagaggat
gcagacaaccagaagaacagccacagagccagccaggcaggcctcaacagcaacactgtc
cacatccctgtcaccatcaccgccccgcccagagagaccaccatcatacccatgaataac
atagactgtgagagcctcccccagaacgaggagaagaagaacttagaggaggatgaggag
gagctgaagaacggccccaaacacattctaccctacagctccatgtttgtgttcgggcag
accaacccggtgcgtcggctgtgccactacgtagtgaacctgcgttactttgagatgtgt
atcctgtcggtcatcaccatgagcagcatagccctggccgctgaagaccctgtgcaggcc
aatgcaccccgcaataacgtgctcaaatatctggactacgtcttcacgggagtgttcacc
tttgagatggtgattaagatgatagacctgggactgctcctccatcctggttcttacttc
cgggacctgtggaacatcctggactttatcgtggtcagtggagctctggtggccttcgcc
tgctcgagcttcatgggaggaactaaaggcaaggacatcaacaccatcaagtccctcagg
gtgctgcgagtcctgaggcccctgaagaccattaaacgactgcccaagctcaaggctgtg
tttgactgcgtggtcaactctctgaagaacgtgctcaacatcctcattgtctacatgctc
ttcatgttcatcttcgctgtcatcgctgtgcagctgttcaagggcaagttcttctactgc
accgacgagtctaaaggtctggagaaggactgcaggggtaagtttctggactatgaccgt
gatgacgtggctgcccaggatcgtgagtggagaaagtacgagttccattatgataacgtg
ctgtgggccttcctcaccctcttcaccgtctccaccggggagggctggccaatggtccta
aagcattctgtggatgccacctatgaggaccagggtcccagcccaggcttccgtatggag
acctctatcttctatgtggtctactttgtggtctttcccttcttcttcgtcaacatcttt
gtggctctcatcattatcaccttccaggaacagggagacaaggccatgtcagagtgtagt
ctggagaagaacgagagagcttgtatcgactttgccatcaacgccaagcctctgacgcgc
tacatgccagcagacaagcagtcgttccagtataagatgtggcagtttgtggtgtcgccg
ccctttgagtactccatcatgaccatgatcgcactgaacactgtggtgctgatgatgaag
tttcacggggctccggagctgtacgaggccatgctgaagtacctgaacatcgtgttcaca
gctctcttcacactggagtgcatcctcaagatcatcgcctttggaccactgaattacctg
aaggcagcctggaacgtgtttgactttgtgacagttttggggagtatcacggacatcttg
gtcacagagattaagacggacaagctgatcaacctgagtttcctgaggcttttcagggcg
gccaggctcatcaagctattgaggcagggctataccatccgcatcctgctgtggaccttt
gtccagtccttcaaggccctaccttacgtctgcctcctcatcgctatgctcttcttcatc
tatgccatcatcggcatgcaggtgtttggaaacattgagctgaatgaggaatcggccatc
aaccaccacaacaacttccagaccttctttcaggctctgatgcttctgttcaggagtgca
acaggcgaggcgtggcatgagatcatgctgtcgtgtctgagtaaccgtccgtgtgataaa
ctgtcagggtctggagggaaggagtgtggcagtgactttgcttacttctactttgtctcc
ttcatcttcctctgctccttcctgatgctcaacctgtttgtggcggtcatcatggataac
tttgagtacctgaccagagacgcctccatcctggggcctcaccacctggacgaatttatc
cgcgtctgggccgagtacgaccctgctgcctgtggccgtatgacctaccttgatatgtac
gagatgctccgccacatgtcccctccgctaggtttgggaaagaaatgcccgcccagaatc
gcctataagcgattggtcaagatgaacatgcccatcgccgatgacaatacggtgcacttc
acgtccacgctgatggctctcatccgcaccgctctggagatcaaactggcatctggggtg
ctggctcagcgcctgtgtgatgctgatctgaggaaggagatctccagagtctggcctaac
ctgcctcagaagactgttgacctgctggtcacaccatataaaattgatgagttcaatgag
ctcatatgcccctttgcggttgtaaaccgagagctgacggtggggaaggtctatgctgcc
ctcatgatctttgactactacaagcagaaccgggccaagagactggaacagcaactggga
ctggacttcacagggacaattaagaataaaaagggtgcagccttcttccgccccatgatg
cccatgacacatatgcaggaggagacgccaatcaccactgccaagcccccgcccccttca
caaccagagcatcagccagagcccccgcccgccaccacctctctaaccaatggtgacaca
gtaccaagccctagaagtgccatgaaagagtccgtatcaggagatcagctgtctcaggag
ggtcagcggtccagcactagcagtcggactctacagcggggccagtcagaggacgtgcca
tactccatcaaacctcaggaatcagtggagatgaggcaggtggagaacggtgctgattta
gagggctactttggtctggagggccatggcagagcagcctccatgcctagactggactcc
cagtactaccggaaccaccctcgccacctacctgggacctacctggcacctatccctgac
atcagtcctatcaggcggtcggcgtccacgttggcttcccagcgcccccgggaggtgagt
ctgagggactacaccctggagaggccgagccaagcccaggcccagtcatcctcagcccca
ggccaggcccaggacaggccctaccaccatcaccaccaccaccgctgtcacagacgcagg
gacaaggacagggacaagaagcagaagtcactcgacaggacatccagcgtgcagccttct
agtatagcaggtttgcctgctgaccctgccgtggagggcttgtccagggagcgggcgagg
gagcgtgaccgaggcaggcctcaggagaggaggcatcactctgctgccggggagaagcag
cgctactactcctgtgagcgctacggaggcagggagcactaccacaccaagtcagctggc
ccgagccgctccacctcccctggagagacccacgacctaggcctcttcaagcagagtatc
ggcatggctaaaggcagccaagtggtcttaacttcaggtttcggcacgccctgccgtggg
cgcagacagctcccccagacccccctcaccccccgccccgccgtggcctacaagaccgcc
aactcctcacctgtgcagtttggtgccacggggcacaagtccagtctcagccgtggcctc
tcggagcatagcgccctgctggagtcacccgccatgcccgtcacccgcatcggctcagac
cccaacctgagcccccagccgcggggtgcccctccacgcagcctccctgaggagcctgat
gacttccaggacgctgtgagcacccatggagggggaggtggccgctcccccaggacctct
gcctcagcatcccatggggctactgagccttcctctgcacctgccccacagggccgggct
ggggtcccaaacgggtaccacttcactctgggggtcaatgccggttcgagttccagcacc
agaggaactgggagcttccgggagaaggaagaggatgactggtgctag
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integrated database retrieval system
