KEGG   Salmo trutta (river trout): 115203985
Entry
115203985         CDS       T08542                                 
Name
(RefSeq) whirlin
  KO
K21879  whirlin
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:stru03037]
    115203985
Cilium and associated proteins [BR:stru03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   115203985
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 HHD_RTEL1 USH1C_N PAH_ZNF598
Other DBs
NCBI-GeneID: 115203985
NCBI-ProteinID: XP_029625009
LinkDB
Position
12:64885872..65029957
AA seq 913 aa
MSRMSTDLERMSLNSSSANSVASSARTLSANVKKLHNALNLLLNELEREQFIHCLNVYHS
KRNVYDLVQTLKVILNAPSKRQLLPMLRQVIPRSDQLLFDQHTSEGLYLKSDLLARNGSA
EALGEPPGEVRQVTLKRHKSNEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRIGDQI
MKVNNTVFDKVTHAEAVKVLKGSKKLSLWVRSVGRIPGGYVTNHVYTWVDPQGRSVTPPP
DLPEHRSATLRRSDSQRRSNMQLLQEGDEKKVNLVLDDGRSLGLMIRGGAEYALGIYITG
VDRGSAAECGGLKVGDQILEVNGRSFLGIPHDEAVRMLKSSRHLMMTVKDVGRLPHARTV
VGETKWITSSQIAESSASGSVAGFPGVHNEEGEYRPVFYKGVAGSQVTLSSLVNQSRAML
EEQARHLLTETERQTMGYYMEEYRDGHIGVEQLVMALFELLNTHAKFSLLSEVRGLVTPQ
DLERFDGMVLRREIQALKARQGGASAAALHPDSLSMVSYPDTLASSSASYMTSTTLSSAR
ERLLWLIDMMENDSTVESNGGDTQESLDALPDISLDEVHSTSESPPTFKPPPPPGVQRRP
SRRDQVKKLPSSESSHSGLYFTAPSRNPPIDQRGEQGPPSSTKVPPKKDPSVPPKRDPSA
PPKKEMATAQLSMVNKHPIGPFPRVQSPTRTTKPAAPSPSPPPPPPLTAPSAPPPLPHSQ
DKSSPGSNKQHFVMVEVHRPNAESDVNEVRSLPQARGANLSQLSDSGQTLSEDSGVDIGE
SGRFSKESSPRPARLRPPRHPQGAGGDTPAKPPGLLEPTSTLVRVAKSASTLGIAIEGGA
NTRQPLPRIVTIQRGGSAHNCGQLRVGQVILEVNGVSLRGREHRDAARLIAEAFKTNERD
HVDFLVTEFNVAL
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgtctagaatgagcacggatctagagcgtatgtcgctcaactcctcctcggccaactcg
gtggcctcgagtgcccgcacgctgtcagccaatgtcaagaagctgcacaacgcgctcaac
ctgctgctcaacgaattggagcgggagcagttcatccactgcctcaacgtgtaccactcc
aagcgtaatgtctacgacctggttcaaacacttaaagtcatcctcaatgcgcccagcaaa
cgccaacttctgcccatgctacggcaggtcattccccgctccgaccagcttttgtttgac
cagcatacctcggagggcctttacttgaaatcggatttacttgccagaaatgggagcgcc
gaagcgttgggcgaacctccaggagaggttcgacaggtgaccctgaaacggcacaagagc
aacgagggcttgggtttcagtatccgcggaggctcggagcacggggtcgggatctatgtg
tctctggtggagccgggatccctggccgaaaaggagggactaaggattggggatcagatt
atgaaagtcaacaacacagtgttcgataaagtcacgcatgctgaagcagtgaaggtgttg
aagggcagtaagaagctgtccctgtgggtgcggtcggtggggcgtatcccggggggttat
gtcactaatcatgtgtacacctgggtggaccctcagggtcgcagtgtgacccctccccct
gacctcccagagcaccgcagtgccaccctgagacgcagcgacagccagcgacgcagcaac
atgcagctactgcaggagggagacgagaagaaggtgaacttggtattggacgatggccgt
tcgctgggtctgatgatccgggggggggcagagtatgccttggggatctacatcacagga
gtggaccggggctctgctgcagagtgtggaggactcaaggtgggtgaccagatcctggag
gtgaacgggcgcagcttcctgggcatcccacacgacgaggcggtgcgcatgctcaagtcg
tcgcgccacctgatgatgacggtgaaggatgtggggcgcctgccgcacgccaggacggtg
gtgggggagaccaagtggatcactagctcccagatagcagagagctccgccagtggcagc
gtggccgggttcccaggtgtgcataatgaagagggggagtatcggccggtgttctataag
ggtgtggcgggctcccaggtgaccctgtccagcctggtgaaccagagcagagccatgctg
gaggagcaggcccgccacctgctgacggagactgagaggcagaccatgggctactacatg
gaggagtaccgagacggacacataggggtggagcaactggtcatggccctgtttgaattg
ctcaacacacacgccaagttctccctgctatcagaggtgcgtggcctggtgacgccccag
gatctggagcgtttcgatgggatggtgctgcgccgcgagatccaggctttgaaggcccgg
caggggggtgccagtgcggccgccctccaccctgactccctctccatggtttcctaccca
gatacactggcctcctcgtcagccagctacatgacctccaccaccctcagctcagcacgg
gaaagactgctgtggttgatagatatgatggagaatgacagtacggtggagagtaatggg
ggggatactcaggagagtctggatgcgctgccggacatatctctggatgaggtgcactcc
acgtccgaatctccccccaccttcaaaccaccaccccctccaggggtgcagagacgcccc
agcagacgggaccaggtcaaaaagcttccctcctccgaatcctcccattctgggctctac
ttcaccgccccctcccgtaacccccccattgaccagaggggggagcaagggcccccctcc
tcaaccaaggtcccccccaaaaaggatccctcagtcccccctaagagggacccctctgcc
ccccctaagaaggagatggcaactgcccagctctccatggtcaacaagcaccctataggc
cccttcccccgagtccagtcccctactaggaccaccaagcctgccgccccctctccatct
ccaccccctccgccgccgctcactgccccatccgcaccccctccgcttccccacagccag
gacaagtcctcccctggctccaacaaacagcactttgtcatggtggaggtccataggccc
aatgcagagtctgatgtcaacgaggtgcggtcactgccccaggcacgaggtgccaacctg
tcccagctgtcagacagtggacagacgctgagcgaggacagcggggtggacattggcgag
tcagggcgtttcagcaaggaaagcagtccgcgtcccgcccgcctacgccccccacgacat
ccccagggggcaggaggggacacccccgccaaaccgccgggtctcttggaacccacctcc
acactagtgagggtggcaaagagtgccagcaccctcggcatcgccatcgaagggggtgcc
aacactcgccagcccctgccacgcatcgtcaccatacagaggggcggctcggcgcataac
tgcgggcagctgcgggtgggtcaggtgatcctggaggtgaacggggtttccctgagggga
cgggagcacagggacgccgcacgcctcatcgcagaggccttcaagaccaacgagagggac
cacgtggacttcctggtcaccgagttcaacgtggcgctatag

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