Salmo trutta (river trout): 115203985
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Entry
115203985 CDS
T08542
Name
(RefSeq) whirlin
KO
K21879
whirlin
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115203985
Cilium and associated proteins [BR:
stru03037
]
Primary cilia and associated proteins
USH complex and associated proteins
115203985
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
USH1C_N
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
115203985
NCBI-ProteinID:
XP_029625009
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All DBs
Position
12:64885872..65029957
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AA seq
913 aa
AA seq
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MSRMSTDLERMSLNSSSANSVASSARTLSANVKKLHNALNLLLNELEREQFIHCLNVYHS
KRNVYDLVQTLKVILNAPSKRQLLPMLRQVIPRSDQLLFDQHTSEGLYLKSDLLARNGSA
EALGEPPGEVRQVTLKRHKSNEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRIGDQI
MKVNNTVFDKVTHAEAVKVLKGSKKLSLWVRSVGRIPGGYVTNHVYTWVDPQGRSVTPPP
DLPEHRSATLRRSDSQRRSNMQLLQEGDEKKVNLVLDDGRSLGLMIRGGAEYALGIYITG
VDRGSAAECGGLKVGDQILEVNGRSFLGIPHDEAVRMLKSSRHLMMTVKDVGRLPHARTV
VGETKWITSSQIAESSASGSVAGFPGVHNEEGEYRPVFYKGVAGSQVTLSSLVNQSRAML
EEQARHLLTETERQTMGYYMEEYRDGHIGVEQLVMALFELLNTHAKFSLLSEVRGLVTPQ
DLERFDGMVLRREIQALKARQGGASAAALHPDSLSMVSYPDTLASSSASYMTSTTLSSAR
ERLLWLIDMMENDSTVESNGGDTQESLDALPDISLDEVHSTSESPPTFKPPPPPGVQRRP
SRRDQVKKLPSSESSHSGLYFTAPSRNPPIDQRGEQGPPSSTKVPPKKDPSVPPKRDPSA
PPKKEMATAQLSMVNKHPIGPFPRVQSPTRTTKPAAPSPSPPPPPPLTAPSAPPPLPHSQ
DKSSPGSNKQHFVMVEVHRPNAESDVNEVRSLPQARGANLSQLSDSGQTLSEDSGVDIGE
SGRFSKESSPRPARLRPPRHPQGAGGDTPAKPPGLLEPTSTLVRVAKSASTLGIAIEGGA
NTRQPLPRIVTIQRGGSAHNCGQLRVGQVILEVNGVSLRGREHRDAARLIAEAFKTNERD
HVDFLVTEFNVAL
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaatgagcacggatctagagcgtatgtcgctcaactcctcctcggccaactcg
gtggcctcgagtgcccgcacgctgtcagccaatgtcaagaagctgcacaacgcgctcaac
ctgctgctcaacgaattggagcgggagcagttcatccactgcctcaacgtgtaccactcc
aagcgtaatgtctacgacctggttcaaacacttaaagtcatcctcaatgcgcccagcaaa
cgccaacttctgcccatgctacggcaggtcattccccgctccgaccagcttttgtttgac
cagcatacctcggagggcctttacttgaaatcggatttacttgccagaaatgggagcgcc
gaagcgttgggcgaacctccaggagaggttcgacaggtgaccctgaaacggcacaagagc
aacgagggcttgggtttcagtatccgcggaggctcggagcacggggtcgggatctatgtg
tctctggtggagccgggatccctggccgaaaaggagggactaaggattggggatcagatt
atgaaagtcaacaacacagtgttcgataaagtcacgcatgctgaagcagtgaaggtgttg
aagggcagtaagaagctgtccctgtgggtgcggtcggtggggcgtatcccggggggttat
gtcactaatcatgtgtacacctgggtggaccctcagggtcgcagtgtgacccctccccct
gacctcccagagcaccgcagtgccaccctgagacgcagcgacagccagcgacgcagcaac
atgcagctactgcaggagggagacgagaagaaggtgaacttggtattggacgatggccgt
tcgctgggtctgatgatccgggggggggcagagtatgccttggggatctacatcacagga
gtggaccggggctctgctgcagagtgtggaggactcaaggtgggtgaccagatcctggag
gtgaacgggcgcagcttcctgggcatcccacacgacgaggcggtgcgcatgctcaagtcg
tcgcgccacctgatgatgacggtgaaggatgtggggcgcctgccgcacgccaggacggtg
gtgggggagaccaagtggatcactagctcccagatagcagagagctccgccagtggcagc
gtggccgggttcccaggtgtgcataatgaagagggggagtatcggccggtgttctataag
ggtgtggcgggctcccaggtgaccctgtccagcctggtgaaccagagcagagccatgctg
gaggagcaggcccgccacctgctgacggagactgagaggcagaccatgggctactacatg
gaggagtaccgagacggacacataggggtggagcaactggtcatggccctgtttgaattg
ctcaacacacacgccaagttctccctgctatcagaggtgcgtggcctggtgacgccccag
gatctggagcgtttcgatgggatggtgctgcgccgcgagatccaggctttgaaggcccgg
caggggggtgccagtgcggccgccctccaccctgactccctctccatggtttcctaccca
gatacactggcctcctcgtcagccagctacatgacctccaccaccctcagctcagcacgg
gaaagactgctgtggttgatagatatgatggagaatgacagtacggtggagagtaatggg
ggggatactcaggagagtctggatgcgctgccggacatatctctggatgaggtgcactcc
acgtccgaatctccccccaccttcaaaccaccaccccctccaggggtgcagagacgcccc
agcagacgggaccaggtcaaaaagcttccctcctccgaatcctcccattctgggctctac
ttcaccgccccctcccgtaacccccccattgaccagaggggggagcaagggcccccctcc
tcaaccaaggtcccccccaaaaaggatccctcagtcccccctaagagggacccctctgcc
ccccctaagaaggagatggcaactgcccagctctccatggtcaacaagcaccctataggc
cccttcccccgagtccagtcccctactaggaccaccaagcctgccgccccctctccatct
ccaccccctccgccgccgctcactgccccatccgcaccccctccgcttccccacagccag
gacaagtcctcccctggctccaacaaacagcactttgtcatggtggaggtccataggccc
aatgcagagtctgatgtcaacgaggtgcggtcactgccccaggcacgaggtgccaacctg
tcccagctgtcagacagtggacagacgctgagcgaggacagcggggtggacattggcgag
tcagggcgtttcagcaaggaaagcagtccgcgtcccgcccgcctacgccccccacgacat
ccccagggggcaggaggggacacccccgccaaaccgccgggtctcttggaacccacctcc
acactagtgagggtggcaaagagtgccagcaccctcggcatcgccatcgaagggggtgcc
aacactcgccagcccctgccacgcatcgtcaccatacagaggggcggctcggcgcataac
tgcgggcagctgcgggtgggtcaggtgatcctggaggtgaacggggtttccctgagggga
cgggagcacagggacgccgcacgcctcatcgcagaggccttcaagaccaacgagagggac
cacgtggacttcctggtcaccgagttcaacgtggcgctatag
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