Salmo trutta (river trout): 115203992
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Entry
115203992 CDS
T08542
Name
(RefSeq) POU domain, class 5, transcription factor 1-like
KO
K09367
POU domain transcription factor, class 5
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115203992
03021 Transcription machinery [BR:
stru03021
]
115203992
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115203992
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
115203992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Stevor
Motif
Other DBs
NCBI-GeneID:
115203992
NCBI-ProteinID:
XP_029625022
Ensembl:
ENSSTUG00000013314
UniProt:
A0A673Y8R8
LinkDB
All DBs
Position
12:65302055..65304759
Genome browser
AA seq
469 aa
AA seq
DB search
MSERPQSPTSECNSRPDDFSRAMYAQALSQEGFGGASLQIPHGVLQHHSLLFNKAAYNGM
PPTTNQTLLPFPPGAGDYRASDLQAGDFCQPKHWCPIAAPEYTGQVAGVAAPTHPTNLRP
PNTETREQVKMSEIKLEKDVNDEYGQKIQHYPTPPSSAVAHGVYYSTPWNSSFWPGFPPI
TAANTNTQNLNSIPSTSSSSSPSLSPSPPSNGLPGVTFFNGSASQTAQAPQAQTSTRSSG
SSSGGCSDSEEEENLSTEELEQFAKELKHKRITLGFTQADVGLALGNLYGKMFSQTTICR
FEALQLSFKNMCKLKPLLRRWLNEAETSDNPQDMYKIERVFVDTRKRKRRTSLEGSVRTA
LESYFVKCPKPNTQEITHIADDLCLERDVVRVWFCNRRQKGKRLALPFDEECEGQYYEQG
PPPPHMAHSPLPGQGYSLSGGPTFYMPPLQRPDVFKQALHPGLVGHLTS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcgaccccaaagccctacttcggagtgcaacagccggcctgatgacttcagc
cgggccatgtacgcccaggccttgagtcaagaggggtttggaggcgcgtcgctccagatc
ccacacggcgttctacaacatcatagtcttctcttcaacaaggccgcatataatgggatg
cctccaacaaccaatcaaacacttttgccgttcccaccgggcgctggtgactatagggcc
tccgacttgcaagccggtgacttttgccaacccaaacactggtgtcctatcgccgctccg
gagtacaccggccaagtagcaggggtcgcagcgcctacccaccccacaaacctgaggcca
cctaacaccgaaaccagggaacaagtcaagatgtccgaaataaagcttgagaaggatgtc
aatgacgagtatgggcaaaagattcaacattatccaactccaccttcctctgctgtagct
cacggggtttactactcgaccccatggaattcgtcgttttggcccggctttccccccatc
acggctgcaaacaccaatactcaaaacctcaactccataccctcaacatcgtcttcatcg
tccccatctctctcgccctcaccccccagtaacgggttacccggggtcacgttcttcaac
gggagcgcaagccaaactgcccaagcgccgcaggcgcaaacctctacccggagcagtggt
tcctccagcggcgggtgcagcgactcggaggaagaggagaacctttcaactgaggagctg
gaacagtttgccaaggagctgaagcacaagcgtataactctgggtttcacacaagcagat
gtaggcctggcactaggcaacctttatggcaagatgttcagccagactacaatttgccgc
tttgaagcgctccagcttagcttcaagaacatgtgcaagctgaagcccctgctccgcaga
tggctgaatgaggctgagacctcggacaacccccaggatatgtacaagatcgagcgggta
tttgtggacaccaggaagaggaagcggaggaccagtctggaggggtcggtgcgcacggct
ctggagtcctactttgtcaagtgtcccaaaccgaacacccaggagatcacacacattgct
gatgacctgtgtctggagagagatgtggtgcgtgtgtggttctgtaaccgcagacagaag
ggcaagcgcctggccctccccttcgatgaggagtgtgaaggacagtactatgagcagggc
ccccctcccccgcacatggctcactcacccctccctgggcaggggtactctctctccggg
ggccccaccttctacatgccccccctccagaggccagatgtctttaagcaggccctgcac
cctggactggtgggtcacctgacaagctaa
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