KEGG   Salmo trutta (river trout): 115204007
Entry
115204007         CDS       T08542                                 
Name
(RefSeq) tRNA pseudouridine synthase A-like isoform X1
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:stru03016]
    115204007
Enzymes [BR:stru01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     115204007
Transfer RNA biogenesis [BR:stru03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    115204007
 Prokaryotic type
    115204007
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-GeneID: 115204007
NCBI-ProteinID: XP_029625056
Ensembl: ENSSTUG00000024401
UniProt: A0A674AFV2
LinkDB
Position
12:65769057..65772205
AA seq 422 aa
MQKIRALIASPRVLSIKSNGWLYKCAGIRWIMSEESGNVQTKPLKRVEEGNRESGENGHI
RKKLKSDVEQTGDERKLPKRKVVLLLAYSGKGYYGMQRNAGSSQFKTIEDELVTALIKSG
CIPDNHGDDMKKMSFQRCARTDKGVSAAGQVVSLKLWMIEDIKEKLNSNLPPQIRVLGLK
RVTGGFNSKNSCDARTYSYMLPTLAFAPKDYGTENSTAFRLEPETLQRVNRLFGSYKGTH
NFHNFTSQKAARDPSARRYITEMTCGEPFVRGGAEFAEITVRGQSFMMHQIRKMIGLVIA
VVKGYSGDEVLKRSWGEEKVDVPKAPGLGLVLEKVHFDRYNKRFGGDGLHECLEWTEEEQ
AILAFKEEHIYPSIVETECQEGSMASWMATLPIHDFEATAKGAQDKDRGQDDDEGNGSDS
AL
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgcagaaaattcgagccttgatagcaagtccacgagtgttgagtatcaaaagcaacggt
tggctttacaagtgtgcagggataaggtggataatgagcgaagagtcagggaatgtgcag
acaaagccactgaaacgagtggaggagggaaatagagagtcgggtgagaatgggcacatc
agaaagaagcttaagtctgatgtagaacagactggcgatgagaggaaactccccaaaaga
aaagtggtcctgcttttggcgtattcaggcaaaggttactacggtatgcagagaaatgct
ggatcttcccagttcaaaaccattgaggatgagctggttacagcactgattaagtctggg
tgcatcccagacaaccatggagatgatatgaaaaaaatgtcattccaaagatgtgcaaga
acagacaagggtgtttctgcagcaggtcaggtggtctctctaaaactatggatgattgaa
gacataaaggaaaagctcaactccaatcttccacctcagatcagagtgctgggtctgaaa
cgagtgactgggggcttcaattctaaaaacagctgtgatgcccgcacatactcctacatg
ctccccactttggccttcgccccaaaagactatggcaccgagaattccactgcattccgc
ctggagccagagacactgcagagagtaaaccgtctgtttggcagctacaagggcactcat
aactttcacaacttcacctcccagaaggccgcgcgggaccccagcgcccgccgctacatc
acagagatgacctgtggtgagccctttgtgcgcggcggcgccgagtttgctgagattacc
gtgcgtggccagagcttcatgatgcatcaaatccggaaaatgattggcctggtgatagct
gtggtgaagggctattctggggatgaggtgttaaagcgaagctggggcgaggagaaggtg
gatgtgcccaaggcccctgggctgggcctagtgctcgagaaggtgcactttgataggtac
aacaagcgcttcggcggggacggcctccatgagtgcctggagtggactgaagaggagcag
gctatcttggccttcaaggaggaacacatctaccccagcattgtggagacagagtgccag
gaagggtccatggccagctggatggccacactgcccatacacgactttgaggccactgca
aaaggggctcaggataaggacagggggcaggatgatgatgagggtaatggttcagattct
gcactttga

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