Salmo trutta (river trout): 115204148
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Entry
115204148 CDS
T08542
Name
(RefSeq) guanine nucleotide exchange factor VAV2-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04517
IgSF CAM signaling
stru04519
Cadherin signaling
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115204148
04519 Cadherin signaling
115204148
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115204148
09142 Cell motility
04810 Regulation of actin cytoskeleton
115204148
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
CH
SH3_1
SH3_9
SH2
SOS1_NGEF_PH
PH
C1_1
RHG20_PH
DUF7145
C1_2
SH2_2
PLU-1
PH_10
CDC24
DH_Alsin
ANC1_spectrin
Motif
Other DBs
NCBI-GeneID:
115204148
NCBI-ProteinID:
XP_029625364
Ensembl:
ENSSTUG00000024865
LinkDB
All DBs
Position
12:73839409..74085796
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AA seq
887 aa
AA seq
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MEEWRQCGRWLIDCKVLPPNHRVVWPSAAVFDLAQALRDGVLLCQMLHNLSPGSVDLKEI
NFRPQMSQFLCLKNIRTFLKVCHDKFGLRNSELFDPFDLFDVRDFGKVISALSRISHHSI
VQIKGMRPFPSEDTALNEDDVYRSLEELADEHDVGEDDIYDCVPCEDDGDDIYEDIIKVE
VRQPMIRYMQKMGMTEDDKRHCCLVEIQETEAKYYKTLEDIEKNYMIPLKQVLSPQDMGA
IFVNLEDVIKVHFALLRAIDLNMVSGGNGLGKIFIDFKERLLIYGQYCSHMETAQKTLDE
LITTREDVKMKVEECTMKVQEGKFKLQDLLVVPMQRVLKYHLLLKELVSHSTDQPDRQQL
KEALEAMQDLAMYINEVKRDNETLKKISEFQNSIENLQVKLEEYGRPKIDGELKVSSIVN
RTKQDRYIFLFDKVVIVCKRKGYSYELKEIIELQSYKMSDDPMNNRDVKKSSGKMWSYGF
YLIHLQGKQGFQFFCKTEDTKRKWMEQFEMAMSNIKPEKATANQHNFQMHTFEKNTNCRA
CKMLLRGIFYQGYYCSRCGTGAHKECLECITICKINPLDTDPGLPSSGPKMVAVRNYHGT
PVPPGKTPLSFQTGDFIELLKGEPDTTWWEGKLIQTQKSGFFPNNCVKPCLDPKPLFQSF
PSRQPSRETDYYGYPWFAGNMERTQADNLLKSHSSGTYLIRERTAEAERFAISIKFNDEV
KHIKVIEKDSWIHITEAKKFESLLELVEYYQSHSLKESFKLLDTTLRYPYKSKERGPASR
ASTRSPGEPIPAAIGASYNFSFLSPQGLNFSSQSSAPFWSVFTPRVVSTAVARYNFAARD
MRELSLREGDIVKIYSKIGGDQGWWKGEANGRIGWFPSTYVDEEGVQ
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtggaggcaatgcgggcggtggttgatagactgcaaggttttgcccccaaac
caccgggtcgtgtggccttctgcagccgtgttcgacttggcacaggcgctacgagacgga
gtgctcttgtgccagatgttgcacaacctgtcaccggggtctgtggacctaaaggagatc
aacttcagaccccagatgtcccagtttctctgtctgaagaacatccggacgttcctcaag
gtgtgccacgacaagtttggcctgcgcaacagtgagctgtttgacccatttgacctgttc
gatgtcagggatttcggcaaggtgatctcagccctgtccaggatctcccatcacagcatt
gtgcagatcaaaggcatgaggccttttccttcggaggacactgctctgaatgaggatgac
gtgtaccggagtcttgaggagctggcagatgagcatgacgtgggggaggatgacatctac
gactgtgttccctgtgaggatgatggagatgacatctacgaggacatcatcaaggtggaa
gtacgacaacccatgatcagatacatgcagaaaatgggcatgacagaagacgacaagaga
cactgctgcttagtggagatccaggagactgaggccaagtactacaagacgctggaggac
attgagaagaattatatgattcccctgaagcaagttctaagtccacaagacatgggggcc
atctttgtaaatctggaggatgtgattaaggtccactttgctctgctgagggccatcgac
ctcaacatggtgagcggaggcaatggtctggggaagatcttcatagacttcaaggaaagg
ttgctgatctacggccagtactgcagccacatggagaccgctcagaagacactggatgag
ctcatcaccacgcgggaggacgtcaagatgaaagtagaggagtgcactatgaaggtgcag
gaagggaagttcaagctccaggacctgttggtagtgcccatgcagagagtactaaagtac
catctcctactcaaggagctggtgagtcattcaactgaccaacctgacagacagcagctg
aaggaggcgttggaggccatgcaggacttggctatgtacatcaatgaagtgaagagagac
aacgagaccttgaagaagattagtgaattccagaactccatcgagaaccttcaggtcaaa
ctggaggagtatggcagaccaaagatagatggagagctcaaggtgtcctccatagtcaac
cgaacaaaacaggaccggtacatattcctgtttgataaagtggtcattgtgtgcaagcgg
aaaggctacagctatgaactgaaagagatcattgagctgcagtcatacaaaatgtctgac
gaccccatgaacaacagggacgtgaagaagtccagtggaaaaatgtggtcctatggcttc
tacctgatccacctgcaaggcaagcagggctttcagttcttctgtaaaacagaggacacc
aagaggaaatggatggagcagtttgagatggccatgtcaaatatcaagccggagaaagcc
acggccaatcagcacaacttccagatgcacacgtttgagaagaacaccaactgccgagct
tgcaagatgctgctgagggggatcttctaccaggggtactactgttcccgctgtgggact
ggagcacataaagagtgtctagagtgcatcaccatctgcaaaatcaatccactcgacacg
gaccctggactaccgtcatcaggccctaagatggtggccgtaaggaactatcatgggacg
cctgttcctccagggaagactccactctcctttcagacaggggacttcatcgagctgctg
aagggggaacctgacaccacctggtgggagggaaagcttatccaaacccagaagagtggt
ttctttcctaacaactgtgtaaagccttgtttggaccccaagcctttgttccagtccttc
cccagccggcagccctcaagggaaacagactactatggatacccctggtttgctggcaac
atggagcggacacaggctgacaacctgttgaagtcccacagcagtggaacatacctgatc
agagagaggactgctgaggcagagcggttcgccatcagcatcaagttcaatgatgaagtg
aagcacattaaagtcattgagaaagacagctggatccacatcactgaggctaagaagttt
gagagtctactggagttggtggagtactatcagtctcattcgctgaaggagagtttcaag
ctgctagacacgactttacgatatccctataaatctaaagaacgggggccggcgtcgcgg
gccagcacccgctctccaggtgagcccatccctgcagccattggcgcttcctacaacttc
tccttcctcagtcctcagggtctcaacttctcctctcagagctcagcccccttctggtca
gtattcacgccgagggtggtcagcacagcggtggccaggtacaactttgcagcacgggac
atgagagagctgtcactcagagaaggggacatcgtcaagatctacagcaagattggagga
gaccagggctggtggaaaggagaggccaatggcaggattggctggtttccctcaacgtac
gttgacgaagaaggagttcagtga
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