Salmo trutta (river trout): 115204226
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Entry
115204226 CDS
T08542
Name
(RefSeq) GRB10-interacting GYF protein 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115204226
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115204226
Surveillance factors
Other surveillance factors
115204226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
115204226
NCBI-ProteinID:
XP_029625482
Ensembl:
ENSSTUG00000009906
LinkDB
All DBs
Position
12:77290586..77326109
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AA seq
1059 aa
AA seq
DB search
MTAETLNFGPECCLGEDNGRCISNLNLRLRALSRGRSVTSPPPSPALPKSKLADYRYGRE
EMLALYIKDDKPPEDITQDKEFAAILQDEPVQPLALEPLTEEEQRNFSMSVNSVAVLRLM
GKGGGAAPAAVAKGRGGGIRGRGRGEGAFYQRAPGGPDDGEVGFGRGREMLRSQSWDDRA
ERPRFEKPIRRAEVVRPGFEEAGPLGRKDSWRADSDNWRTLREEEEEAAGGGGGGGGEQP
AWRVAGTRRDDGGPRSAGWRDHGGRRKFEFDFRDSEGPRREDDRDGLPEWCTDEEDGEMG
TFDSSGAFMCIKKGSKGTITEEDLEFEALEEGKDNGQERKDNGQEGKDNYKDNYTDRDEC
EAACEGVVKYRTPSPPAVSAPPSSDPLPAPCAPEAPLAPISHPSKTNHVHTEGSSPPGSG
AQLSPDPPSSTTTSSGLMPPPSFGSLLPSTGGEVEEDEGMKHLQQEAEKMVASLQDTSLE
EECFTQALQESHNITSQSHTHPASHTHTAGHTHSHSAHRDCALPLSHEAAMKWFYKDPQA
EIQGPFSTVEMCEWFQAGYFSMTLLVKRGCDEGFQPLGDVIKMWGRVPFSPGPSPPPLLV
RQPPPPRGSSGNMDQELLKKQLEQAATAALYQQLQIRFQHMNRSGESSMMPSMNRSMSVP
DNGSMWDMRTSASQQSGGETNLWDLNISHSTQGPSLEQLQKLQDRREAELRAKREEEERK
RREEKRRQQEEQKRREEEELYRRKQQCRQQQELILKLLQQAQPGGPGCVSGSGSVWSGPQ
ASALSKQGKSLSLLELETERLLKQQSQHQRAQQQRDRHGGLSMGQWGEGSVGMWSGGGME
PKGSSGGMGVWEEAVKNQNSLRNMGMKNSRSSPSLSEQYMLRKKRTEEEDKLLKLLQGMK
PQDGFTTWCEQMLHALNTSANNSHSSSLDVATIVAYLKEVESPYEVLDFIRSYLGDTVEA
KEFAKQFLERRAKQKANHQRQQQQQLSKEVPGLSVNNFPLQSMFQAAQMGKGGMYDSQAA
KMKKKQTMMLHSDPSILGYSFLSAGDRMSLGEMETVEDY
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaaacacttaacttcggcccagaatgttgtctaggggaagataatgggcga
tgcatatccaacttaaacttgaggctccgtgcactatccagagggcggagtgtgacgtcc
ccccctccatctccagcattgccaaagtccaagctggccgattaccgctatggtcgcgag
gagatgctagcactttatatcaaagatgacaagcccccagaggatatcacgcaggataag
gagtttgctgctatcctgcaggatgagcctgtgcagcctttggccctggagcctctaact
gaggaggagcagagaaacttctccatgtctgtgaacagtgtggctgtgctgaggttgatg
ggaaagggaggcggggccgcccctgcagctgtggccaagggtcgtggaggaggcatcaga
gggagaggaagaggtgaaggtgcattctaccaaagagctcctggaggtcctgatgatgga
gaggtgggctttggtcgtggccgagaaatgctccgcagccaaagctgggatgaccgagct
gagaggcccaggtttgagaagccaatcaggcgtgctgaggtagtgcgtccagggtttgag
gaggcggggcctcttggcaggaaggactcctggcgtgccgacagcgacaactggcgtacc
ctccgggaggaggaagaagaggcagcaggaggaggaggaggaggagggggagagcagcca
gcctggagagttgcaggaacccgccgtgatgatgggggtcctcggtctgcaggctggcgt
gatcatggcggccggaggaagtttgagtttgacttccgtgacagcgagggcccccgcagg
gaggacgacagggacggccttcctgagtggtgtacagatgaagaggatggagagatgggc
acctttgactcctcgggggccttcatgtgcatcaagaaaggctccaagggcaccatcact
gaagaggatctggagtttgaagctctagaggaaggcaaggacaacggtcaggaacgcaag
gacaacggtcaggaaggcaaggacaactataaggataactacactgacagagatgagtgt
gaagcagcatgtgagggggtggtcaagtacaggactccatctcctcctgctgtctcggcc
cctccctcctcagaccctctccctgccccttgtgccccagaggctcccctggcacccatc
tctcacccctccaaaaccaaccatgtgcacactgaaggcagctcacctccagggagtggt
gctcagctcagtccagaccccccctcctccaccaccacttcctccggcctgatgcctcct
ccctccttcggatctctcctcccatcaacagggggagaagtggaggaggacgagggcatg
aagcacctgcaacaggaggctgaaaagatggtggcatctttacaggacacatcccttgag
gaggagtgtttcactcaagcactgcaggagagccacaacattacctcccaatctcacaca
cacccagcctctcacacacacaccgctggacacacacactcccactctgcccatagggac
tgtgccctgcccctctcccatgaggcagccatgaagtggttttacaaggacccccaggca
gagatccaaggtcccttctccacggtggagatgtgtgagtggttccaggcaggctacttc
tccatgaccctgctggtaaagcggggttgtgatgagggcttccagcccctgggtgacgtc
atcaagatgtgggggcgcgtgcccttctcccccggcccctccccgccacccctgctggtg
agacagcctccaccacctcgggggtcctctggcaatatggatcaggagctgctgaagaaa
cagttagaacaggcagccactgcagctctataccagcaattgcagataaggtttcagcac
atgaacaggagtggggaatcgagcatgatgccctcgatgaacaggtccatgtcagtacca
gataatgggtctatgtgggacatgcgtacctcagcctcccagcagtcaggaggtgagacc
aacctatgggacttaaacattagtcattccactcaggggccatctctggagcagctacag
aagctccaggaccggcgtgaggctgaactcagggccaagcgagaggaggaggagaggaag
cggcgggaggagaagaggaggcagcaggaggagcagaagaggcgtgaggaggaggagctg
tacaggcgtaagcagcagtgtcggcagcagcaggagctgatcctgaagctgctgcagcag
gcccagcccgggggcccagggtgtgtctctgggtcagggtccgtgtggagtggcccccag
gcctcagctctctccaagcaaggcaagagcctcagcctgctggagctggagaccgagagg
ctgctcaaacagcagtcccagcaccagagggcccagcagcagagagacaggcatggaggc
ctgtctatgggtcagtggggtgaggggtctgtgggcatgtggtctggtgggggcatggag
cccaaaggcagctctggaggtatgggtgtctgggaggaggctgtgaagaaccagaacagc
ctccgcaacatgggcatgaagaacagccgcagcagcccctctcttagcgagcagtacatg
ttgaggaagaagcgtacagaggaggaggacaaactgctgaagctgctgcagggcatgaaa
ccccaggacggcttcaccacctggtgtgaacagatgctgcacgcgctcaacacctccgct
aacaactcccactcctcgtccctggacgtagccaccatcgtggcctatctgaaggaggtg
gagtctccctacgaagtccttgactttatccgctcctacctgggcgacactgtggaagcc
aaagagtttgccaagcagttcctggagcggcgtgccaaacagaaagccaaccaccagaga
cagcagcaacagcagctatcaaaagaagttccaggactctctgtgaacaactttcctcta
cagtcaatgttccaggcagcccagatggggaagggaggaatgtatgacagccaggctgca
aagatgaagaagaaacagaccatgatgcttcactccgaccccagcatcttaggatattca
ttcctgagcgcaggggacaggatgagcctgggcgagatggaaacagtggaagattattga
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