Salmo trutta (river trout): 115204240
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Entry
115204240 CDS
T08542
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115204240
04082 Neuroactive ligand signaling
115204240
04519 Cadherin signaling
115204240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115204240
Ion channels [BR:
stru04040
]
Ligand-gated channels
GABA-A
115204240
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
KOKOPELLI
Motif
Other DBs
NCBI-GeneID:
115204240
NCBI-ProteinID:
XP_029625501
LinkDB
All DBs
Position
12:77869336..78008359
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AA seq
474 aa
AA seq
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MAATLQKLAVLVSGIWICLLLLNPFPQTGAVVGHREPMPDDSRDNITIFTRILDRLLDGY
DNRLRPGLGAESVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLP
LNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLED
FPMDTHDCPLKFGSYAYTNNEVVYLWTKGDEGSVVVADDGSRLNQYDLLGHDIGKESMIS
STGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLT
MTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDGKKEAQE
MRRRESASLSKKANNTFNIVGTTYTINEAKDPGLTTVSRSATTATHHHHHHHHHSHKVPK
MDENYVEAIKSYNRVSRVDKVSRIIFPVLFFIFNLVYWATYINSKPPPKSTTHN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggctgccactctccagaaacttgcagtactcgtgtcgggcatatggatctgcctcctg
ctcctcaacccctttccacaaaccggggcagtggttgggcacagagagccgatgcctgac
gacagtagagacaacatcactattttcacccggatcctggacagactgctggatggctac
gacaacaggcttcgccccggactaggagcagagagtgtgacggaggtgaggacaaatatc
tacgtgaccagctttggaccggtgtcagacacagacatggagtacaccatcgatgtgttc
ttccgtcagagctggagggatgagaggctgaagttcgacgggcccatgcaggtcctgcct
cttaacaacctcctggccagtaagatctggactccagacaccttcttccacaatgggaag
aaatctgtggcccacaacatgaccacgcccaacaaactgctacgactggtggacaacggt
accctgctttacactatgaggctaaccatccacgctgagtgtcccatgcacttggaggat
ttccccatggatacacatgactgccctctgaagtttgggagctatgcgtatacaaacaat
gaggttgtctatctctggaccaaaggagatgagggctctgtagtcgtagcagatgatggg
tcaaggctaaaccagtatgacctactgggccacgatattgggaaagaatctatgatttcc
agcacaggagaatatgtagtgatgacaacgtatttccatttgaaaaggaaaattggctat
tttgtgattcaaacctaccttccgtgcatcatgactgtcatcctgtctcaggtctccttc
tggctaaacagagagtcagttcccgcccgcactgtattcggggtcaccacagttctaacc
atgacaaccctaagtatcagtgccaggaactccctgcctaaggtggcctatgccacagct
atggactggttcatggcggtatgctatgcctttgtcttctctgccctgatagagtttgcc
acagtcaactactttaccaagcgcagctgggcatgggacggcaagaaggaggcccaggag
atgaggagaagagaatctgcctctctttccaaaaaggccaataacaccttcaacattgtt
ggaactacatacaccatcaacgaggcaaaggacccaggtttaaccaccgtctccaggagt
gccaccacagctacacaccaccaccaccaccaccaccaccacagccacaaggttcctaaa
atggacgagaattacgtggaagccataaagtcctacaaccgcgtcagcagagtggacaag
gtctcacgcatcatcttccctgtgctgttcttcatcttcaacctggtctattgggccacg
tacatcaacagcaagccgcctcccaagtccaccacccacaattaa
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