KEGG   Salmo trutta (river trout): 115204275
Entry
115204275         CDS       T08542                                 
Name
(RefSeq) nuclear RNA export factor 1-like
  KO
K14284  nuclear RNA export factor
Organism
stru  Salmo trutta (river trout)
Pathway
stru03008  Ribosome biogenesis in eukaryotes
stru03013  Nucleocytoplasmic transport
stru03015  mRNA surveillance pathway
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115204275
   03015 mRNA surveillance pathway
    115204275
   03008 Ribosome biogenesis in eukaryotes
    115204275
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115204275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stru03019]
    115204275
   03009 Ribosome biogenesis [BR:stru03009]
    115204275
Messenger RNA biogenesis [BR:stru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115204275
   mRNA cycle factors
    Stress granule specific factors
     115204275
Ribosome biogenesis [BR:stru03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    115204275
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 UBA_8 LRR_8 LRR_4 LRR_9
Other DBs
NCBI-GeneID: 115204275
NCBI-ProteinID: XP_029625582
Ensembl: ENSSTUG00000032395
LinkDB
Position
12:78709347..78732223
AA seq 632 aa
MSTADDSRYCNDHDDRVGGQKVRNRKGRGPFRAPMYSDQGPVGPRPRHRGSQRGGGGPGP
RARFDDEDGDVAMTDSNSQDGSSQHRFNPYGRPNRRGDDRFDRGRRGGGGGHRGRGNNKG
GDGGGGGRKNWFKMSVPYGKKYDKDWLITALQNICSMPFTPVHYHVEGNRAEFFIEDSTT
ANALFKVSRKITDKEGYKVTVLMNPCPPPSFLQSELKPADLEHLKQCMAKRFDGSQQALD
LNNIRIDPDLVSQNIDVTLNRKNSMRAVIKIIEENIPELVCLNLSNNKLFRLDDLSELVN
KVPNLKTLNLSHNELKTERELDRIKGLKLVELWLERNPLCDYFKDQASYISEVRERFPRL
LKLDGQDLPPPIVFDVEVTPDALPPCKPSYFCSEEIKTPIVGFLQQYYSVYDSGDRQPLL
DAYHDGATFSLSMPFTMQNPSRCSLGDYHKDSRNLKKLKDPTTRFRLLKHTRLNVVAFLS
ELPKTQHDTASLIVDVNTFTNTLLSFTVTGVFKEVEGKSRDSVRAFCRVFVTVPAGGTSL
CIVNDELFVRNATTEEIRRAFVAPAPTPSSSPVPTLSAPQQEMLSAFSLKSGMNLEWSQK
CLQDNEWDFNRAAQVFTDLKAHGKIPDVAFIK
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgtcaacagccgacgattcacgttactgcaacgatcacgatgaccgagttggaggacaa
aaggttcgcaaccgtaaaggcagagggcctttcagggcccctatgtatagtgaccagggg
ccagtaggaccaagaccaagacatcgtggtagccaaagaggcggcggcggcccgggaccc
agagcgagattcgacgatgaggatggagatgtggcaatgacggacagcaactcccaagat
ggatcctcccaacacagatttaacccttatggaaggccaaatcggcgtggtgacgaccgc
tttgaccggggccgcagaggtggtggaggaggtcacaggggtcgtgggaataacaaagga
ggggatggaggtggaggtggccgcaagaactggttcaagatgtctgtcccctatggaaag
aaatacgacaaagactggctgataacagcactgcagaatatctgctccatgcccttcacc
ccagtacattaccacgtggagggaaaccgagcagagttctttattgaggattccacgact
gcgaatgccttgtttaaggtatcacggaagatcacagacaaagagggctacaaggtgact
gtactgatgaatccctgtcctccaccctcctttctccagtctgaactaaagccagctgat
ctggagcacctgaagcaatgcatggctaaacgttttgatggctctcaacaagccctggac
ttgaacaacatccggatagacccagacctggtgtcccagaacattgatgtgactttgaac
agaaagaactccatgcgtgctgttattaagataattgaggagaatattccagagcttgtg
tgtctgaaccttagcaacaacaagctatttaggctggatgacctgtcagagctggtcaac
aaggttcccaacctgaagacactcaacctttctcataacgagttaaagacagagcgcgag
ctggacaggatcaagggtcttaagctggtggagttatggctggagaggaaccccctttgc
gactatttcaaggaccaggcttcatacatcagcgaggtgagagagaggttccccaggctt
ctcaaactggacggtcaggatctccccccgcccatagtctttgatgtggaggtgactcct
gacgcccttccaccttgcaagcccagctacttctgctctgaagagatcaagactcccatc
gttggcttcctacaacaatactacagtgtgtatgactccggagacagacagcctttgtta
gatgcctaccatgatggagcaaccttctccttgagcatgcccttcaccatgcagaacccc
tccaggtgcagtcttggagattaccataaagacagtcgcaacctgaaaaagctcaaggat
cccaccacacgattccgcttactgaagcacactcgtctgaatgtggtggctttcctgagc
gaactgcccaaaacgcagcatgacaccgcatctctaattgtggacgtcaacaccttcacc
aacacgttactgtcgttcacggtcactggagtgttcaaagaagttgaaggtaaatcccgc
gactctgtgagagctttctgccgggtgtttgtcacagtgccagctggagggacaagtctt
tgcatagtgaatgacgagctgtttgtgcgcaacgctacgactgaggagatccgccgggcc
tttgtggcacctgcccccaccccatccagcagtcctgtccccaccctctcagccccccag
caagagatgctctctgccttctccctcaagtccggcatgaatcttgaatggtcccagaag
tgcctacaggacaatgagtgggatttcaaccgagcagcgcaggtcttcacagacctcaag
gctcatggaaagatcccagatgttgctttcataaagtga

DBGET integrated database retrieval system