Salmo trutta (river trout): 115204281
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Entry
115204281 CDS
T08542
Name
(RefSeq) syntaxin-5-like
KO
K08490
syntaxin 5
Organism
stru
Salmo trutta (river trout)
Pathway
stru04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115204281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115204281
Membrane trafficking [BR:
stru04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
115204281
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
DUF16
DUF5063
DUF7260
Motif
Other DBs
NCBI-GeneID:
115204281
NCBI-ProteinID:
XP_029625593
Ensembl:
ENSSTUG00000032843
LinkDB
All DBs
Position
12:complement(78803530..78811722)
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AA seq
350 aa
AA seq
DB search
MNTRRRHGPRNSQEGVYLGPAQTQSPLIQLQDPQLTAPSPPPPPPLVDISNMSGRDRTNE
FQSVCRSLQGRQNGVQSSKPALSAVRQRSDFTLMAKRIGKDLSNTFAKLEKLTIFAKRKS
LFDDKAVEIEELTYIVKQDINSLNKQIAQLQGLVRSRQSQNGKHLQTHSNTIVVSLQSKL
ASMSNDFKSVLEVRTENLKEQKSRRDQFSQAPASSSRLHASNFGNSLLMQDDSKRTAEVS
IDMDFRASQQLQLINEQDSYIQSRSDTMQNIETTIVELGSIFQQLAHMVKEQEETVQRID
ANVEDTQLNVDMAHSEILKYFQSVSSNRWLMVKIFLVLIVFFIVFVVFFA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgcgtcgtcgccacggtcctaggaacagccaggaaggggtgtacctagggcct
gcccagacccagtcaccgctgatccagttgcaggacccacaactcacagcccccagtcca
ccaccacctcccccactggtggacataagcaacatgtctggcagggaccgcaccaatgag
ttccagtcagtctgcaggtccctacaggggagacagaatggggtccagtccagcaagcca
gccctcagtgcagtcagacagcgcagtgactttacactcatggcaaagaggattgggaag
gacttgagtaacactttcgccaaactggaaaaactcacaatatttgccaaaaggaaatcc
ctttttgatgacaaagctgtggagattgaggagttaacctacatcgttaaacaggacata
aacagtctgaataaacagatagcacagctgcaggggcttgtgcgctccagacagagtcag
aatggcaaacacctacagacacattccaacaccatcgttgtctccctccagtccaaactg
gcatcaatgtcaaatgacttcaagtcagtgctggaggtcaggacagagaacctcaaagag
cagaagagtagaagagatcaattttctcaagccccagcatcctcctcccgtctacatgcc
agcaacttcggtaactcattgttaatgcaggacgactctaaaaggacagctgaagtctct
atagacatggacttccgtgccagccaacagctgcagcttatcaacgaacaggactcgtac
atccagagccgttcagacaccatgcagaacatagagaccaccatcgtagagctgggttcc
atcttccagcagctggcccacatggtgaaggagcaggaggagacagtgcagagaattgat
gccaatgtggaggacacccagctcaacgtggacatggcacactcagagatcctcaagtac
tttcagtctgtctcatccaaccgctggctcatggtcaaaatcttcctcgtcctcatagtt
ttcttcatcgtctttgtggtcttctttgcttga
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