KEGG   Salmo trutta (river trout): 115204326
Entry
115204326         CDS       T08542                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
stru  Salmo trutta (river trout)
Pathway
stru03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115204326
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:stru03041]
    115204326
Spliceosome [BR:stru03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115204326
 Complex B
    115204326
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 115204326
NCBI-ProteinID: XP_029625668
Ensembl: ENSSTUG00000045206
LinkDB
Position
12:complement(79782023..79794722)
AA seq 890 aa
MADKNGKKGKPVGVKRTLTKREQEDLKKKEEEKAAEVFEEFLACFDSNDKSGVKTFVRGG
IVNATKEEEAAEVKKSKLYRPITKFTSVSQNVSPAHTSEIRRPIVKKKTEEKKKSNLELF
KEELKQIQEEREERYKRKTNEPGGGYGDLDIPLTRRSIFDDDPAIPNTTNLYIGCISPKM
NEEMLCKEFGKYGPLASVKIMWPRSDEERTRVTNRGFVAFMTRKDAERALAALDGKTVMG
FEMKLGWGKAVRIPPQPLYTPIGVLKMSTPPPPSGLPFNAQPRDRFRNDFTKPWGRSKEE
FDKTLSEAVVKVVIPTERNLLGLIHRMIEFVVREGPMFEAIIMSKEKNNPDLRFLFDNKS
QEHVYYRWKLYSILQGEPPSEWRTADFRMFRGGSIWRPPLLNPYLHGDEEAGEEEESPSL
EEELLKKGQLKTEHRERLETLLRGLTPRREDIGDAMLFCLERAEAAEEVVGSIAESLSLL
QTPLQKKIARLYLVSDILYNSCAKVANASYYRKYFEAKLPQIFGDISDAYRNIQARLQAE
QFKQKIMGCFRAWEDWAVYPESYLIQLQNIFLGLIKAGEEVIERVEVSSPDLDGAPLDGA
PLDGAPLDNLDGSPLAWDPASLDGVPVDDIDGVPLGAPMEDIDGMPLDDLAHSRVALSKW
ERVDDADALPQANTESKWDTLGERDLGDDLNASANIKGDGKSEDDSSDDDSPSKYDNADF
KSSLSSFEMSESKRSRLRELEVKVMKFQDELESGKKPRKSGLNMQKQVAHYRNKLLQKEF
DKDDKEKRERSIPKSKERSKKDERRDKAEETCKGRDKEKSKRSQDRDRGRSRDTEERTQK
YRGHSPAKIKSKSPKKSKRSRSPSPVRKTWRRSSSRSPHRSHKKTKKSKH
NT seq 2673 nt   +upstreamnt  +downstreamnt
atggcagacaaaaatggcaagaaagggaaacctgtaggcgtgaagagaacattgaccaag
agagaacaagaagatctgaagaaaaaggaagaagaaaaagcagctgaagtttttgaagag
tttttagcatgttttgacagtaacgacaaaagtggagtgaagacttttgtccgtgggggt
atcgtcaatgcaactaaagaagaggaagcagcagaggttaaaaagagcaagctttaccga
ccgatcaccaagtttacttcagtgtcccagaacgtctcaccagcgcacacttctgaaatc
agaaggcctattgttaaaaagaagacggaagagaagaagaagagcaaccttgaacttttt
aaagaggagctaaagcaaatacaagaggaacgcgaagaaaggtacaaaagaaagacaaat
gagcctggaggaggatatggagacttggacataccactaacgcgacgatcaatatttgat
gatgacccagccataccgaacacaaccaacctgtacattggctgcattagccccaagatg
aatgaagaaatgctttgcaaagagtttggcaagtatggtcccctggcgagtgtgaagatc
atgtggccccgtagtgacgaggaacgcacaagggtcacaaatagaggctttgtggccttc
atgaccaggaaagatgcagagagggccttggctgctctagacggtaaaacggttatgggt
tttgaaatgaagctgggatgggggaaagctgttcgcatccctccccagccactctataca
cccataggggtacttaaaatgtccacgcccccacccccctccggcctgcccttcaacgct
cagcccagagaccgcttccgcaatgactttaccaagccatggggcaggtccaaggaggag
tttgacaagactctgtccgaagctgtagtcaaagtggttatcccaacagaaaggaatctg
ttaggcctcatccacaggatgatagagtttgtggtgcgtgagggacccatgtttgaagcc
atcattatgagcaaagagaagaacaaccctgacttgaggtttctctttgacaacaaaagc
caagagcatgtgtactaccgctggaaactctactccattctccagggcgagccccccagt
gagtggaggaccgcagacttccggatgttccgtgggggctccatctggaggccgcccctc
ctaaacccctacctccatggagatgaggaggcgggagaggaagaggagtctccctccctg
gaggaggagctgctgaaaaagggccagctgaagacagagcacagggagagactggagacg
ctgctgagaggactcacccctcgtagggaggacattggtgatgctatgctgttctgtctg
gagagagccgaggcagcggaggaggtggtggggtccatcgcagagtccctgtccctcctt
cagacaccactacagaaaaagattgccagactgtaccttgtatcggacatcttgtacaac
tcctgtgccaaagttgccaatgcatcttattatcgcaaatattttgaagcaaaattgccc
cagatatttggtgacattagtgatgcatatagaaacatacaagcaagactacaagctgaa
cagttcaagcaaaagataatgggctgtttcagggcctgggaagactgggccgtataccca
gagtcttacctgatccagctgcagaacatcttcctgggtctgatcaaggcaggagaggag
gtgatcgagagggtagaggtgtcgtctccagacctggatggagccccgttggacggggca
ccgttagacggagctccgctggacaaccttgacggctcacccctggcctgggaccctgcc
tccctggatggggtgcctgttgatgacatcgacggggttcccctgggtgcacccatggag
gacattgacggaatgcctttggatgacctggcccactcaagagtggctctatctaaatgg
gagagggtggacgatgctgacgctctcccacaagctaacactgaatccaaatgggacact
ttgggagagcgagacttgggggatgacctgaatgccagtgctaacattaagggagatggg
aagtccgaggacgacagcagcgatgatgacagcccctctaagtacgacaatgctgacttc
aagagctccctcagcagttttgagatgtctgaaagcaagaggagccggctgagagagctg
gaggtgaaggtgatgaagttccaggatgagctggagtctgggaagaagcccaggaagtca
gggttaaacatgcagaaacaggtggcgcactacaggaacaagctgttgcaaaaggagttt
gataaggatgacaaggaaaagagagagagatccattccaaaatcaaaagagcgatcaaag
aaggatgagcggagagacaaggcggaggagacctgtaaaggacgggacaaggagaagagt
aaaaggagtcaagaccgggacaggggacggagtagagacacagaggagcggacacagaaa
tacagaggacattctcccgcaaaaataaagtcaaagtctcccaagaagtccaagcggtcc
cggtcgccctcgccagtcaggaagacgtggaggcggtctagctcccggtcgccacaccgc
tcccacaaaaagactaagaagagcaaacactga

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