Salmo trutta (river trout): 115204349
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Entry
115204349 CDS
T08542
Name
(RefSeq) nuclear factor related to kappa-B-binding protein-like isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115204349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115204349
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
115204349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
115204349
NCBI-ProteinID:
XP_029625709
Ensembl:
ENSSTUG00000031824
UniProt:
A0A674BP10
LinkDB
All DBs
Position
12:80684125..80706254
Genome browser
AA seq
1274 aa
AA seq
DB search
MDALDHMLTDPLDSGEGNDGRITEECMLGNCQVSLPEDLLEDPEIFFSVLSESTWSEVLT
DDQRQHLRQLLPHFQEDNTSEQDSTISKLFNKQNFCFGNPLHLAQKLFQDGHFNPEVVKY
RQLCAKSQKKRQLNSLQQYYHKLLKQILVSRKELLELAVRSGPDIAVNRKYPTQTHGEVQ
EQRVRGRVCRILREVKTECGDSNASSDDDDTASWLPTPQSPSSPTPTVSVRVLPSLSTQD
MKTTDKQELGEKDMRAMLRRHREKRRRQPDHPDLMTSDIRLGDMMSRVNIGRKGSMMTLF
DLALPKRKMREERRKKKMRTIKVESEDPCEALMPSEAPAPSVNITAALPETPVTPLPSVK
EEPMEEVQSSPAMVEEIAVSFFNLLENILKLDGLASTTMLEEKVQQWQTSPASSLNPWFS
SASCWSEMVLPALHFLAGETKVGMLVLPSGFTPYVAFRENSQRWKWIGPSQDGEKDLSAL
WQLWVDSKDLVVVKTECEELTEMTSPTPRVSWTDFVVRPSTGDERHVFQVQEQQRYDQPH
KAFTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPAYVTILSLVRDAAARLPNG
EGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRD
RGQEEFERIHQAQAAAAKARKALQQKPKPASKPKSGSKEGGGKTPGGLEASDVGGPMSPT
PTTPTTSTPGTPKSPLAPVATTPTKAGIPDSVKTSPGVLLVSPPPMPQLGTLLSSCQSGP
QVSQPATSQHTARVVGHQSGSLPQVRVVSSQTAGGQHATLVHQTPHQIRVPVTMGTKGIT
QAVVSLPLRTQSAGSPIQVQASRGQTTLSVSGLTTAVTVLKPQTASPGSPAHNPTSPSVR
QGVTSQNIIKQVAITGQLGIKSQGRPGLPITATNLRIQGKDVLRLPPSSITTDSKGQTVL
RITPDMMATLTKSPLTTVKLTPDMLGTATTKSISATLHVTPPHSTSSPASSSGEVRTSKA
SAGTTTLLKAAGDTIRLMPTLAVTMAEQKTRTFSTVSSSDSKSGTTIRIMPGLGVIPQKQ
GQTITMTTTTGSKPVSTGAATVTIATSGLAGAKGVTVGSSASGSLTLGTATATVRQVPVT
ATVVSTQPGKLPARFTVPLSVLSQPLKSKSVMTTPILKGNLSTNISSLGRNIILTTMPAG
TKLIAGNKPVSFVTAQQLQQLQQQGQATQVRIQTVPAQQLQQRSAAGSPKSMSTVVVTTA
PSPKRAPDPPPPAQ
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccttgatcacatgctgaccgaccccctagactcaggggagggcaatgatggg
cgcatcacggaagagtgcatgttgggaaactgtcaagtgagtcttccagaagacctgctt
gaggatcctgaaatcttcttctctgtgctgagtgaaagcacctggtctgaagtactgaca
gatgaccagaggcagcatctccgtcaactgttaccccactttcaagaagacaacactagt
gagcaggacagcaccatcagcaaactcttcaacaaacagaacttctgcttcggaaacccc
ttgcatcttgcacagaaactgttccaagatggccatttcaatccagaagtggttaagtac
agacagctgtgtgccaagtcccagaaaaaacgccagctgaactcgttgcagcagtactac
cacaaactccttaaacagatcctggtctctagaaaggaactgttagagttggctgtccgc
agtggccctgacattgcggtgaacagaaagtatcccacccagacacatggtgaggtgcag
gaacagagggtcagaggaagagtgtgccggatactgagggaagttaaaactgagtgtgga
gacagcaatgcctcatctgacgatgatgatacagcctcttggctgccaacacctcaatct
ccttcctctccaacgcccacagtctctgtcagggttctgcccagtctctccacccaggac
atgaagaccaccgataagcaagaactgggagagaaggacatgagagccatgctacggaga
catagagagaagaggagacgacaaccggatcatccagacttgatgacttctgacatccgc
ctgggtgacatgatgtctagagtgaacataggtcgtaaaggctccatgatgacactgttt
gacctggctctgcccaagaggaagatgagggaggagaggagaaagaagaagatgaggaca
attaaagtggagtctgaggatccctgtgaggctctgatgccttcagaagccccagctcca
tcagttaacatcacagctgctctgcctgagaccccagtcactccactgcccagtgtcaag
gaagagccgatggaggaggtgcagagcagccctgccatggtggaggagatcgctgtgagc
ttcttcaacctgctggagaacatcctaaaactagacggcctcgccagcaccaccatgttg
gaggagaaggtccaacagtggcagacatctccagctagttccctgaacccctggttctcc
tcggcctcctgctggtcagagatggtgctgccggccctgcacttcctggctggggagact
aaagtcggtatgttggttcttcccagtggcttcactccctatgtggcgttcagggaaaac
tcccagcgatggaaatggattggtcccagtcaggatggagagaaggatttgagtgctctg
tggcagctgtgggtcgactccaaggacttggttgtggtcaagacagaatgtgaagaacta
acagagatgacttctcccacccctagagtcagttggactgacttcgtggtgcggcccagc
acaggagacgagaggcatgttttccaagtgcaggagcagcagcgatacgaccagccacac
aaagccttcaccttcagaatgcatggctttgagtctgtggtggggcctgttaagggggtc
tttgacaaggagatgtctctcaacaaagccagagaacacactctgctgcgctctgaccgc
ccagcttatgtcaccatcctctccttggtgcgggacgcagcagcccggctgcccaacgga
gaggggaccagagctgagatctgtgagctgctcaaggactctcaattcctggcaccagat
gtcaccagtgctcaggtgaacacggttgtgagtggggctctggacaggctgcactatgag
aaggacccctgtgtgaagtatgacatcggccgcaagctgtggatttacctgcaccgcgac
cgcggtcaggaggagtttgagaggattcaccaggctcaagctgctgctgccaaggccaga
aaggctctgcagcagaaacctaaacctgcgtcgaagcctaagtctggaagtaaggagggg
ggtggtaagacccctggaggcctggaagcaagtgatgtggggggtcccatgtccccaact
ccgaccacccccactaccagcacccctggaacccccaaatcacccctcgcccctgtagcc
acaacccccaccaaagctgggatcccagattcagtcaagaccagtcctggtgttctactg
gtgtctcctccccccatgccccagctggggaccctgttgtccagctgccagtctggcccc
caggtctctcagccagctacctcccaacacacagccagggtagtgggccaccagtcaggc
tctctcccacaggtacgagtggtttcttcccagacagcaggaggacagcatgccacgctg
gtgcaccaaacccctcatcaaatcagagtgccagtcaccatgggaaccaagggcatcaca
caggctgtggtgtcgttaccactgaggacccagtctgctggtagccccatccaggtgcag
gcgtccagagggcagacaaccctgtcagtgtcaggcctgacgactgctgttactgtcctc
aaacctcagactgcgtcccctggcagcccagcacacaaccctacctccccctctgtccga
cagggagtcaccagccagaacatcatcaaacaggtggctatcacaggccagttgggcata
aagtctcaaggtagaccgggtcttccaataacggcgaccaatcttcgcatccagggcaag
gatgtgctccgcctgcccccctcctccatcaccacagactctaaaggacagacggtgctg
cggatcactcctgacatgatggccaccctaactaagtcccctctcaccaccgtcaaactc
acccccgacatgttaggcactgccactaccaagagcatatctgctactctccatgtgacc
ccaccccactccacctccagcccagcctcctcctcgggtgaagtccggaccagcaaggcc
tctgctggcaccaccaccctgctgaaggctgcaggggatactatccgcctgatgcccacc
ctagcagtcactatggcagagcagaagaccagaaccttctccaccgtctcctcgtctgac
tcgaagagtggcaccaccatacggatcatgcccggcctcggggtcatcccacagaaacag
ggccaaaccatcacaatgacaaccaccactggcagcaaaccagtctccactggagccgcc
actgtcaccatagccaccagcggactggccggagctaaaggggtgacggtaggctcttct
gcctcaggctccctgactctgggaacagccacagctactgtccgccaggtccccgtcaca
gccacagtggtgtccacacaaccagggaagttaccagctcggttcacagtgcctctgtct
gtcctcagccaaccactgaaaagtaagagtgtgatgaccacgcccatactgaaaggaaac
ctcagtaccaatatcagcagtctgggcaggaacatcatcctcaccaccatgcctgccggt
accaagctgatagctgggaacaagccagtcagctttgtcacggctcaacagttgcagcag
ctgcagcagcagggacaggccacacaggtgcggatccagacggtgccagcccagcagctc
cagcagcgctcggcagcaggctcccccaagtcaatgtccactgtcgtagtcaccaccgca
ccctcacccaaacgggccccggacccgccaccaccagcacagtga
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