Salmo trutta (river trout): 115204445
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Entry
115204445 CDS
T08542
Name
(RefSeq) neurexin-2-like isoform X1
KO
K07377
neurexin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115204445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115204445
Membrane trafficking [BR:
stru04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
115204445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
115204445
NCBI-ProteinID:
XP_029625882
Ensembl:
ENSSTUG00000001252
LinkDB
All DBs
Position
12:82718642..83071647
Genome browser
AA seq
1652 aa
AA seq
DB search
MISSQGRCEVRAVWALLLTGLLLTVMATALEYEGVPGQWARYGRWEAKATGQLSFALKTN
ISKALVLYLDDGGNCDFLELLISDGRLHLRFTIHCAEPASLHTETRVNDQRWHRVLLTRN
YKETSLVVDNEDKVAEVKSKRSEMVVASDLYVGGISPDVRLSALTSSTVKYEPPFQGLIT
NLKLGETLPVLLDGQSVQNDLEYLCIKQNPCNNRGLCSIHQGEVLCDCTNTGYKGKYCHE
VIQKAVEGLAHLMLNRQAKEESVATYKGNEFFSYDLSQMPIQSKLDEITLSFRTLQRNGL
LLHTGKSADYVNLSLRSGAVWLVINLGSGAFEALVEPTNGKFNDNAWHEVHITRNLRQVT
VSVDGILSTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNNEF
RLELSRLAAERDPQVSVHGDLTFRCEDVAALEPVTFDTPASYLTLPRWNTKKTGSISFDF
RTTEPSGLLLFSHGDGRLQDPDRQADRQARADYFAMELMDGFLYLVMDMGSGSIKMKASN
KRVNDGEWCHVDFQREGRKGFISVNSRSTPFSADEGNEILDLEGDMYLGGLPEARQRLIL
PPEVWTAPLNLGYVGCMRDLFMDGRSRDLRRLAEIQSASGVSSFCTRETHIRCGRDVCGN
GGQCREGWNRHVCDCTSTGYLGPNCESEATVLSYDGSMYLKVMLPVSVHTEAEDVALRFM
SQRAFGLLLATTSQDSADTLRLELDAGRVKLTVNLDCIRIDCNLSKGPEMLLAGQKLNDN
EWHSVKVVRLGKNLQLSVDNVTVEGHMAGTHTRLEFHNIETGIMTERRFISVVPTNFIGH
LQALSFNGVPYLDQCKNGDISYCELNARFGMRHIVADPVTFHSRASYLAFSTLQAYASMH
LFFQFKTTSPDGLLLFNSGDGSDFIMVELVKGYIHYVFDLGNGPSLMKGNSEKPLNDNQW
HDVVVSRDDNNVHILKTDSRTVTQHSNGARNLDLKGELYVGGVGKTMYSSLPKLIASRDG
YQGCLASVDLNGRLPDLMADALHRVGQVERGCGGPSSTCTEDSCHHQGVCLQQWEGFSCD
CTMTSYGGAFCSDPGTTYIFGRGGALITYTWAPNERPSTRADRLAVGFSTQQKDAILVRV
ESTSGLGDYLQLHIEQGKIDVIFNVGTDDITIGEPAVIVSDGKYHVVRFTRSGGNATLQV
DNQPVIERYPPGNFDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQAAIKIGGQD
KGRPFQGQISGLYYNGLQVLKLAAESDPSVQAEGNLRLVGDSLSVLTTETTSTTPLAVSD
MSTTIMETTTTMATTTTRRQRSPSMRESISQSQNSDDILVASAECPSDDEDLEECEPGTG
GELVLPIITVDSLEPPSIATRHPAFPPPPTSLSPLETTKESLMLSNPHPPCPSDQEDCGD
PVEVSAFGSGELTESDDEDFYKNSPLVTDRTVLPPPPPAAGEGRAQKPRNPRPHPSAPTT
NPDQLHIPAGKMNTRDQVLLPPAPPSSRNTPGLTYPPNFPHVPTADPTAPGEKIIYPGLV
DRIGESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDESSYRTDQGHNFINNPVAEGNG
AMVKLEKTPSITATVAKAVTKGNKNKQKEYYV
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgataagcagccaggggaggtgtgaagttcgggccgtgtgggccctgctattgactggg
ctgctgttgacagtcatggccacggccttggagtacgagggagtccctggtcagtgggcg
cggtacggccgctgggaagccaaggccacaggccagctgagcttcgctctgaagaccaac
atcagcaaggccctggtgctctacctggacgacggagggaactgtgacttcctggagctt
ctgatctcagacggccggctgcatcttcgcttcaccatccactgtgcagagccggcctcc
ctgcacacggagactcgtgtcaacgaccagcgctggcaccgcgtgctgctcacccgtaac
tacaaagagaccagcctggtggtggacaacgaggacaaggtggccgaggtcaagtccaag
aggagtgagatggtggtggccagtgacctttatgtaggcggcatttctccagatgttcgc
ctatctgccctcacgtccagcaccgtcaaatacgagccacccttccagggcctgatcacc
aacctaaagctgggggagaccctccccgtgctcctggatggccagagtgttcagaatgat
ttggaatacctgtgcattaaacagaacccctgcaacaacagaggcctatgctccatccac
cagggagaggtcctctgtgactgcaccaacactggatacaagggaaagtactgccatgaa
gttatccagaaagcagtagaaggtctggcgcacttgatgttaaaccgccaagcaaaagag
gagtcggtagccacctacaaaggcaacgagttcttcagctatgacttatctcagatgccc
atccagagcaaactggacgagatcactctgtccttccgcacgctgcagaggaacggcctc
cttctccacaccgggaagtcagctgactatgtcaacctatccctgaggagcggcgctgtg
tggctggtcatcaacctgggctcaggtgcctttgaggccctggtggagcccaccaacggc
aagttcaacgacaatgcctggcacgaagtgcacatcacacgcaacctgcgccaggtgact
gtctctgtggatgggatcctgtcaaccaccggctacacccaggaggactacaccatgcta
ggctcggatgacttcttctacattggggggagtcccaacacggctgacctccctggctcc
ccagtcagcaataacttcatgggctgtctcaaagacgtggtttacaagaacaatgagttc
agactggagctgtctcgtctggctgcagagcgggaccctcaggtcagtgttcacggtgac
ctgaccttccgctgtgaggatgtggctgccctggagccagtcaccttcgacacgcctgcc
tcctacctcaccctgcccaggtggaacaccaagaagaccggctccatctcctttgacttc
cggaccacggagcccagcggcctgctgctgttcagccacggggacggacgtctgcaggac
ccagacagacaggcggacaggcaggccagggctgattactttgccatggagctaatggac
ggctttctctacctggtgatggacatgggctctggcagcatcaagatgaaggccagcaac
aagagggtcaacgatggggagtggtgccacgtggacttccagagggagggtcgtaagggc
ttcatctcggtgaacagccgtagcacaccattctctgcggatgaaggcaatgagatctta
gacctggagggtgatatgtacctggggggtctgcccgaggcacgccagcgcctcatcctc
cccccagaagtctggacggcccccctcaacctgggctacgtgggctgcatgcgagacctg
ttcatggatgggcggagccgggacctgaggagactggcagagatccagagtgcctctgga
gtcagcagcttctgcaccagggaaacacacatcaggtgtggcagagacgtctgtggcaac
ggtgggcagtgccgtgagggctggaaccgtcatgtgtgtgactgcaccagcacgggctac
ctgggtcccaactgtgagagcgaggccacagtgctgagctacgatggcagcatgtacctg
aaggtgatgctgcctgtcagcgtgcacacggaggccgaggacgtggcgctacgctttatg
tcccagagggcctttgggctgctgttggccaccacctcccaggactcagctgataccctg
cgtctggagctggacgcgggccgtgtcaaactcaccgtcaacctggattgtatcaggata
gactgtaacctcagtaaaggcccagagatgctgttagcaggacagaagctgaacgacaat
gagtggcactcagtgaaggtggtacgtcttgggaagaacctgcagctctctgtggacaat
gtgactgtggaaggccatatggccggcacccacacccgcctggagttccacaacattgag
actggcatcatgacagagagacgcttcatctctgtggtgccgaccaacttcatagggcac
ctgcaggccctctccttcaacggcgtgccctacctggaccagtgtaagaacggagacatc
tcctactgcgaactcaacgcccgcttcggcatgcgccacatcgtggctgaccctgtgacc
ttccacagccgggccagctacctagccttctctaccctgcaggcctacgcctccatgcac
ctcttcttccagttcaagaccacctcccctgacggcctgctcctcttcaactctggagac
ggcagtgacttcatcatggtggagctggtcaaagggtacatccattatgtgtttgacctg
ggtaacggaccgtcactcatgaagggcaactctgagaagcctctcaacgacaaccagtgg
cacgacgtggtggtgtcccgggacgacaacaacgtgcacatcctcaagaccgactcccgc
accgtcacccagcactccaatggagcccgtaacctggacctcaaaggggagctgtatgtt
ggtggtgtggggaagaccatgtacagtagcctgcccaagctgatcgcgtcccgcgatggg
taccagggctgcctggcctccgtggacctgaacgggagacttcctgacctgatggcagac
gccctccacagggtgggccaggtggagcggggctgtggaggcccgagcagcacctgtaca
gaggactcgtgccatcaccagggggtgtgtctccagcagtgggagggcttctcctgtgac
tgcaccatgacctcctatggaggagcattctgcagcgaccctgggaccacgtatatcttt
gggagaggaggagccctcatcacgtacacctgggcccctaatgagaggccgagcaccaga
gctgaccgcctagctgtgggcttcagtactcagcagaaagacgccatcttggtcagagtg
gaaagcaccagtggactgggagactacctgcagctgcacatagaacaaggaaagatcgat
gtgatcttcaacgtggggacagatgacatcaccattggcgagccggctgtcatagttagt
gatggcaagtaccatgttgtgcgcttcacacgcagtggtggcaacgctaccctccaggtg
gacaaccaacctgtcatcgaacgctacccgccagggaactttgataatgagcgcctggct
attgctagacaaagaatcccataccgacttggtcgggtagttgacgagtggctactcgac
aaaggacgacagctgaccatcttcaacagccaggcagcgataaagatcgggggtcaggat
aagggccggccgttccagggccagatctctggtctctactataacggcctgcaggtgctt
aagctggcagcagagagtgaccccagtgtccaggctgaggggaacctgaggctggtggga
gactcactgtcagtgctgaccactgagaccacctccaccaccccactggctgtctccgac
atgtccaccaccatcatggagaccaccaccaccatggccaccacaaccacccgcaggcaa
cgctcccccagcatgagggagagcatctcccagtctcagaactcggatgacatcttggtg
gcgtctgctgagtgtcccagtgatgacgaggatctggaggagtgtgagcctggaacaggg
ggtgaattagtgttgcctataataacagtggattcccttgagcccccatccatcgccacc
cgtcaccctgctttcccccctcctcccacctccctgtccccacttgagaccaccaaagag
tccctgatgctgtccaaccctcaccctccctgcccctcggaccaggaggactgcggtgac
cctgtggaggtctcagcctttggttcgggggagttgacggaatcagatgacgaggacttt
tacaaaaactcccccctggtcactgacaggacagtcctgcctcctcctccccccgccgct
ggtgagggccgggcccagaaaccccgtaatccccgcccccatccttctgctcccaccacc
aaccctgaccagctccacatccccgcgggcaaaatgaacacccgtgaccaggtgcttctg
ccccccgcccctccatcatctcggaatacaccaggactaacttacccccccaatttcccc
catgtgcccacagccgaccctacagcccctggtgagaagatcatatatcccggcctggtg
gataggattggggagtccagtagcaccacagggatggtggttggcattgtggcagctgct
gccctctgcattctcatcctcctctacgccatgtacaagtaccgcaaccgtgacgagagc
tcctaccggacggaccagggacacaacttcatcaacaacccagttgctgagggcaacggg
gcaatggtcaagctagagaagacaccaagtataacggctacagtagccaaggctgtcacc
aagggcaacaagaacaaacaaaaagagtattacgtctga
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